Professor Peter Visscher

Professorial Research Fellow

Institute for Molecular Bioscience

Afilliate Professor

Queensland Brain Institute
peter.visscher@uq.edu.au
+61 7 334 66348
+61 7 334 61814
+61 7 344 37045

Overview

Peter Visscher was born in The Netherlands from Dutch and English parents. He moved to Edinburgh in 1987 for an MSc and subsequent PhD in animal breeding and genetics, working on the estimation of genetic parameters in large livestock pedigrees. A postdoctoral period in Melbourne was followed by a return to Edinburgh, where he developed methods to map genetic loci underlying complex traits. In 1995 he moved to a faculty position at the University of Edinburgh, developing gene mapping methods and software tools, with practical applications in livestock and human populations. Visscher joined the Queensland Institute of Medical Research in 2005 and in 2011 moved to the University of Queensland where he is Professor and Chair of Quantitative Genetics. Visscher is a Senior Principal Research Fellow of the Australian National Health and Medical Research Council and was elected a Fellow of the Australian Academy of Science in 2010. Visscher’s research interests are focussed on a better understanding of genetic variation for complex traits, including quantitative traits and disease.

Research Impacts

Visscher's research focuses on understanding individual differences betweeen people in traits that are important for health outcomes and ageing. A better understanding of the genes that underlie variation in risk to diseases may lead to better treatments.

Qualifications

  • Master of Science, University of Edinburgh
  • Doctor of Philosophy, University of Edinburgh

Publications

  • Hendricks, Audrey E., Bochukova, Elena G., Marenne, Gaelle, Keogh, Julia M., Atanassova, Neli, Bounds, Rebecca, Wheeler, Eleanor, Mistry, Vanisha, Henning, Elana, Koerner, Antje, Muddyman, Dawn, McCarthy, Shane, Hinney, Anke, Hebebrand, Johannes, Scott, Robert A., Langenberg, Claudia, Wareham, Nick J., Surendran, Praveen, Howson, Joanna M., Butterworth, Adam S., Danesh, John, Nordestgaard, Borge G., Nielsen, Sune F., Afzal, Shoaib, Papadia, Sofia, Ashford, Sofie, Garg, Sumedha, Millhauser, Glenn L., Palomino, Rafael I., Kwasniewska, Alexandra, Tachmazidou, Ioanna, O'Rahilly, Stephen, Zeggini, Eleftheria, Barroso, Ines, Farooqi, I. Sadaf, UK10K Consortium and Visscher, Peter M. (2017) Rare variant analysis of human and rodent obesity genes in individuals with severe childhood obesity. Scientific Reports, 7 1: 4394.1-4394.14. doi:10.1038/s41598-017-03054-8

  • Benyamin, Beben, He, Ji, Zhao, Qiongyi, Gratten, Jacob, Garton, Fleur, Leo, Paul J., Liu, Zhijun, Mangelsdorf, Marie, Al-Chalabi, Ammar, Anderson, Lisa, Butler, Timothy J., Chen, Lu, Chen, Xiang-Ding, Cremin, Katie, Deng, Hong-Weng, Devine, Matthew, Edson, Janette, Fifita, Jennifer A., Furlong, Sarah, Han, Ying-Ying, Harris, Jessica, Henders, Anjali K., Jeffree, Rosalind L., Jin, Zi-Bing, Li, Zhongshan, Li, Ting, Li, Mengmeng, Lin, Yong, Liu, Xiaolu, Marshall, Mhairi, McCann, Emily P., Mowry, Bryan J., Ngo, Shyuan T., Pamphlett, Roger, Ran, Shu, Reutens, David C., Rowe, Dominic B., Sachdev, Perminder, Shah, Sonia, Song, Sharon, Tan, Li-Jun, Tang, Lu, van den Berg, Leonard H., van Rheenen, Wouter, Veldink, Jan H., Wallace, Robyn H., Wheeler, Lawrie, Williams, Kelly L., Wu, Jinyu, Wu, Xin, Yang, Jian, Yue, Weihua, Zhang, Zong-Hong, Zhang, Dai, Noakes, Peter G., Blair, Ian P., Henderson, Robert D., McCombe, Pamela A., Visscher, Peter M., Xu, Huji, Bartlett, Perry F., Brown, Matthew A., Wray, Naomi R. and Fan, Dongsheng (2017) Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis. Nature Communications, 8 1: . doi:10.1038/s41467-017-00471-1

  • Lukowski, Samuel W., Lloyd-Jones, Luke R., Holloway, Alexander, Kirsten, Holger, Hemani, Gibran, Yang, Jian, Small, Kerrin, Zhao, Jing, Metspalu, Andres, Dermitzakis, Emmanouil T., Gibson, Greg, Spector, Timothy D., Thiery, Joachim, Scholz, Markus, Montgomery, Grant W., Esko, Tonu, Visscher, Peter M. and Powell, Joseph E. (2017) Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood. Nature Communications, 8 483: . doi:10.1038/s41467-017-00473-z

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Supervision

  • Doctor Philosophy

  • Doctor Philosophy

  • Doctor Philosophy

View all Supervision

Available Projects

  • We have several PhD projects are available in our research group. The projects are about quantitative genetic methods and application to large datasets to answer fundamental questions about the genetic basis of quantitative traits and disease in human populations. There are many traits that we study, including gene expression, gene methylation, height and body-mass-index, psychiatric disease and neurogenetic conditions.

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Publications

Book Chapter

  • Yang, J., Lee, (Sang) Hong, Goddard, M. E. and Visscher, Peter (2013). Genome-wide complex trait analysis (GCTA): methods, data analyses, and interpretations. In Cedric Gondro, Julius van der Werf and Ben Hayes (Ed.), Genome-Wide Association Studies and Genomic Prediction (pp. 215-236) New York, NY U.S.A.: Humana Press. doi:10.1007/978-1-62703-447-0_9

  • Wray, Naomi R. and Visscher, Peter M. (2007). Mapping common disease genes. In Mapping common disease genes (pp. 59-79) CAMBRIDGE: CAMBRIDGE UNIV PRESS.

Journal Article

  • Hendricks, Audrey E., Bochukova, Elena G., Marenne, Gaelle, Keogh, Julia M., Atanassova, Neli, Bounds, Rebecca, Wheeler, Eleanor, Mistry, Vanisha, Henning, Elana, Koerner, Antje, Muddyman, Dawn, McCarthy, Shane, Hinney, Anke, Hebebrand, Johannes, Scott, Robert A., Langenberg, Claudia, Wareham, Nick J., Surendran, Praveen, Howson, Joanna M., Butterworth, Adam S., Danesh, John, Nordestgaard, Borge G., Nielsen, Sune F., Afzal, Shoaib, Papadia, Sofia, Ashford, Sofie, Garg, Sumedha, Millhauser, Glenn L., Palomino, Rafael I., Kwasniewska, Alexandra, Tachmazidou, Ioanna, O'Rahilly, Stephen, Zeggini, Eleftheria, Barroso, Ines, Farooqi, I. Sadaf, UK10K Consortium and Visscher, Peter M. (2017) Rare variant analysis of human and rodent obesity genes in individuals with severe childhood obesity. Scientific Reports, 7 1: 4394.1-4394.14. doi:10.1038/s41598-017-03054-8

  • Benyamin, Beben, He, Ji, Zhao, Qiongyi, Gratten, Jacob, Garton, Fleur, Leo, Paul J., Liu, Zhijun, Mangelsdorf, Marie, Al-Chalabi, Ammar, Anderson, Lisa, Butler, Timothy J., Chen, Lu, Chen, Xiang-Ding, Cremin, Katie, Deng, Hong-Weng, Devine, Matthew, Edson, Janette, Fifita, Jennifer A., Furlong, Sarah, Han, Ying-Ying, Harris, Jessica, Henders, Anjali K., Jeffree, Rosalind L., Jin, Zi-Bing, Li, Zhongshan, Li, Ting, Li, Mengmeng, Lin, Yong, Liu, Xiaolu, Marshall, Mhairi, McCann, Emily P., Mowry, Bryan J., Ngo, Shyuan T., Pamphlett, Roger, Ran, Shu, Reutens, David C., Rowe, Dominic B., Sachdev, Perminder, Shah, Sonia, Song, Sharon, Tan, Li-Jun, Tang, Lu, van den Berg, Leonard H., van Rheenen, Wouter, Veldink, Jan H., Wallace, Robyn H., Wheeler, Lawrie, Williams, Kelly L., Wu, Jinyu, Wu, Xin, Yang, Jian, Yue, Weihua, Zhang, Zong-Hong, Zhang, Dai, Noakes, Peter G., Blair, Ian P., Henderson, Robert D., McCombe, Pamela A., Visscher, Peter M., Xu, Huji, Bartlett, Perry F., Brown, Matthew A., Wray, Naomi R. and Fan, Dongsheng (2017) Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis. Nature Communications, 8 1: . doi:10.1038/s41467-017-00471-1

  • Lukowski, Samuel W., Lloyd-Jones, Luke R., Holloway, Alexander, Kirsten, Holger, Hemani, Gibran, Yang, Jian, Small, Kerrin, Zhao, Jing, Metspalu, Andres, Dermitzakis, Emmanouil T., Gibson, Greg, Spector, Timothy D., Thiery, Joachim, Scholz, Markus, Montgomery, Grant W., Esko, Tonu, Visscher, Peter M. and Powell, Joseph E. (2017) Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood. Nature Communications, 8 483: . doi:10.1038/s41467-017-00473-z

  • Yang, Jian, Zeng, Jian, Goddard, Michael E., Wray, Naomi R. and Visscher, Peter M. (2017) Concepts, estimation and interpretation of SNP-based heritability. Nature Genetics, 49 9: 1304-1310. doi:10.1038/ng.3941

  • Maier, R. M., Visscher, P. M., Robinson, M. R. and Wray, N. R. (2017) Embracing polygenicity: a review of methods and tools for psychiatric genetics research. Psychological Medicine, . doi:10.1017/s0033291717002318

  • Chen, Guo-Bo, Lee, Sang Hong, Montgomery, Grant W., Wray, Naomi R., Visscher, Peter M., Gearry, Richard B., Lawrance, Ian C., Andrews, Jane M., Bampton, Peter, Mahy, Gillian, Bell, Sally, Walsh, Alissa, Connor, Susan, Sparrow, Miles, Bowdler, Lisa M., Simms, Lisa A., Krishnaprasad, Krupa, Radford-Smith, Graham L. and Moser, Gerhard (2017) Performance of risk prediction for inflammatory bowel disease based on genotyping platform and genomic risk score method. BMC Medical Genetics, 18 . doi:10.1186/s12881-017-0451-2

  • Zeng, Biao, Lloyd-Jones, Luke R., Holloway, Alexander, Marigorta, Urko M., Metspalu, Andres, Montgomery, Grant W., Esko, Tonu, Brigham, Kenneth L., Quyyumi, Arshed A., Idaghdour, Youssef, Yang, Jian, Visscher, Peter M., Powell, Joseph E. and Gibson, Greg (2017) Constraints on eQTL fine mapping in the presence of multisite local regulation of gene expression. G3: Genes Genomes Genetics, 7 8: 2533-2544. doi:10.1534/g3.117.043752

  • Yengo, Loic, Zhu, Zhihong, Wray, Naomi R., Weir, Bruce S., Yang, Jian, Robinson, Matthew R. and Visscher, Peter M. (2017) Detection and quantification of inbreeding depression for complex traits from SNP data. PNAS: Proceedings of the National Academy of Sciences of the United States of America, 114 32: 8602-8607. doi:10.1073/pnas.1621096114

  • Robinson, Matthew R., English, Geoffrey, Moser, Gerhard, Lloyd-Jones, Luke R., Triplett, Marcus A., Zhu, Zhihong, Nolte, Ilja M., Van Vliet-Ostaptchouk, Jana V., Snieder, Harold, Esko, Tonu, Milani, Lili, Magi, Reedik, Metspalu, Andres, Magnusson, Patrik K. E., Pedersen, Nancy L., Ingelsson, Erik, Johannesson, Magnus, Yang, Jian, Cesarini, David and Visscher, Peter M. (2017) Genotype-covariate interaction effects and the heritability of adult body mass index. Nature Genetics, 49 8: 1174-1181. doi:10.1038/ng.3912

  • Visscher, Peter M., Wray, Naomi R., Zhang, Qian, Sklar, Pamela, McCarthy, Mark I., Brown, Matthew A. and Yang, Jian (2017) 10 years of GWAS discovery: biology, function, and translation. American Journal of Human Genetics, 101 1: 5-22. doi:10.1016/j.ajhg.2017.06.005

  • Garton, Fleur C., Benyamin, Beben, Zhao, Qiongyi, Liu, Zhijun, Gratten, Jacob, Henders, Anjali K., Zhang, Zong-Hong, Edson, Janette, Furlong, Sarah, Morgan, Sarah, Heggie, Susan, Thorpe, Kathryn, Pfluger, Casey, Mather, Karen A., Sachdev, Perminder S., McRae, Allan F., Robinson, Matthew R., Shah, Sonia, Visscher, Peter M., Mangelsdorf, Marie, Henderson, Robert D., Wray, Naomi R. and McCombe, Pamela A. (2017) Whole exome sequencing and DNA methylation analysis in a clinical amyotrophic lateral sclerosis cohort. Molecular Genetics and Genomic Medicine, 5 4: 418-428. doi:10.1002/mgg3.302

  • Lloyd-Jones, Luke R., Robinson, Matthew R., Moser, Gerhard, Zeng, Jian, Beleza, Sandra, Barsh, Gregory S., Tang, Hua and Visscher, Peter M. (2017) Inference on the genetic basis of eye and skin color in an admixed population via Bayesian linear mixed models. Genetics, 206 2: 1113-1126. doi:10.1534/genetics.116.193383

  • Wu, Yang, Zheng, Zhili, Visscher, Peter M. and Yang, Jian (2017) Quantifying the mapping precision of genome-wide association studies using whole-genome sequencing data. Genome Biology, 18 1: . doi:10.1186/s13059-017-1216-0

  • Yang, Jian, Jin, Zi-Bing, Chen, Jie, Huang, Xiu-Feng, Li, Xiao-Man, Liang, Yuan-Bo, Mao, Jian-Yang, Chen, Xin, Zheng, Zhili, Bakshi, Andrew, Zheng, Dong-Dong, Zheng, Mei-Qin, Wray, Naomi R., Visscher, Peter M., Lu, Fan and Qu, Jia (2017) Genetic signatures of high-altitude adaptation in Tibetans. Proceedings of the National Academy of Sciences, 114 16: 4189-4194. doi:10.1073/pnas.1617042114

  • McLaughlin, Russell L., Schijven, Dick, Van Rheenen, Wouter, Van Eijk, Kriste R., O'Brien, Margaret, Kahn, Rene S., Ophoff, Roel A., Goris, An, Bradley, Daniel G., Al-Chalabi, Ammar, Van Den Berg, Leonard H., Luykx, Jurjen J., Hardiman, Orla, Veldink, Jan H., Project MinE GWAS Consortium, Schizophrenia Working Group of the Psychiatric Genomics Consortium, Catts, Stanley V., Gratten, Jacob, Lee, S. Hong, Wray, Naomi R., Visscher, Peter M. and Mowry, Bryan J. (2017) Genetic correlation between amyotrophic lateral sclerosis and schizophrenia. Nature Communications, 8 . doi:10.1038/ncomms14774

  • Marioni, Riccardo E., Campbell, Archie, Hagenaars, Saskia P., Nagy, Reka, Amador, Carmen, Hayward, Caroline, Porteous, David J., Visscher, Peter M. and Deary, Ian J. (2017) Genetic stratification to identify risk groups for Alzheimer's disease. Journal of Alzheimer's Disease, 57 1: 275-283. doi:10.3233/JAD-161070

  • Mendelson, Michael M., Marioni, Riccardo E., Joehanes, Roby, Liu, Chunyu, Hedman, Åsa K., Aslibekyan, Stella, Demerath, Ellen W., Guan, Weihua, Zhi, Degui, Yao, Chen, Huan, Tianxiao, Willinger, Christine, Chen, Brian, Courchesne, Paul, Multhaup, Michael, Irvin, Marguerite R., Cohain, Ariella, Schadt, Eric E., Grove, Megan L., Bressler, Jan, North, Kari, Sundstrom, Johan, Gustafsson, Stefan, Shah, Sonia, McRae, Allan F., Harris, Sarah E., Gibson, Jude, Redmond, Paul, Corley, Janie, Murphy, Lee, Starr, John M., Kleinbrink, Erica, Lipovich, Leonard, Visscher, Peter M., Wray, Naomi R., Krauss, Ronald M., Fallin, Daniele, Feinberg, Andrew, Absher, Devin M., Fornage, Myriam, Pankow, James S., Lind, Lars, Fox, Caroline, Ingelsson, Erik, Arnett, Donna K., Boerwinkle, Eric, Liang, Liming, Levy, Daniel and Deary, Ian J. (2017) Association of body mass index with DNA methylation and gene expression in blood cells and relations to cardiometabolic disease: a Mendelian randomization approach. PLoS Medicine, 14 1: e1002215-e1002215. doi:10.1371/journal.pmed.1002215

  • Robinson, Matthew R., Kleinman, Aaron, Graff, Mariaelisa, Vinkhuyzen, Anna A. E., Couper, David, Miller, Michael B., Peyrot, Wouter J., Abdellaoui, Abdel, Zietsch, Brendan P., Nolte, Ilja M., van Vliet-Ostaptchouk, Jana V., Snieder, Harold, The LifeLines Cohort Study, Genetic Investigation of Anthropometric Traits (GIANT) consortium, Medland, Sarah E., Martin, Nicholas G., Magnusson, Patrik K. E., Iacono, William G., McGue, Matt, North, Kari E., Yang, Jian and Visscher, Peter M. (2017) Genetic evidence of assortative mating in humans. Nature Human Behaviour, 1 . doi:10.1038/s41562-016-0016

  • Lloyd-Jones, Luke R., Holloway, Alexander, McRae, Allan, Yang, Jian, Small, Kerrin, Zeng, Biao, Bakshi, Andrew, Metspalu, Andres, Dermitzakis, Manolis, Gibson, Greg, Spector, Tim, Montgomery, Grant, Esko, Tonu, Visscher, Peter M. and Powell, Joseph E. (2017) The genetic architecture of gene expression in peripheral blood. American Journal of Human Genetics, 100 2: 228-237. doi:10.1016/j.ajhg.2016.12.008

  • Marshall, Christian R., Howrigan, Daniel P., Merico, Daniele, Thiruvahindrapuram, Bhooma, Wu, Wenting, Greer, Douglas S., Antaki, Danny, Shetty, Aniket, Holmans, Peter A., Pinto, Dalila, Gujral, Madhusudan, Brandler, William M., Malhotra, Dheeraj, Wang, Zhouzhi, Fuentes Fajarado, Karin V., Maile, Michelle S., Ripke, Stephan, Agartz, Ingrid, Albus, Margot, Alexander, Madeline, Amin, Farooq, Atkins, Joshua, Bacanu, Silviu A., Belliveau, Richard A., Jr., Bergen, Sarah E., Bertalan, Marcelo, Bevilacqua, Elizabeth, Bigdeli, Tim B., Black, Donald W., Bruggeman, Richard, Buccola, Nancy G., Buckner, Randy L., Bulik-Sullivan, Brendan, Byerley, William, Cahn, Wiepke, Cai, Guiqing, Cairns, Murray J., Campion, Dominique, Cantor, Rita M., Carr, Vaughan J., Carrera, Noa, Catts, Stanley V., Chambert, Kimberley D., Cheng, Wei, Cloninger, C. Robert, Cohen, David, Cormican, Paul, Craddock, Nick, Crespo-Facorro, Benedicto, Crowley, James J., Curtis, David, Davidson, Michael, Davis, Kenneth L., Degenhardt, Franziska, Del Favero, Jurgen, DeLisi, Lynn E., Dikeos, Dimitris, Dinan, Timothy, Djurovic, Srdjan, Donohoe, Gary, Drapeau, Elodie, Duan, Jubao, Dudbridge, Frank, Eichhammer, Peter, Eriksson, Johan, Escott-Price, Valentina, Essioux, Laurent, Fanous, Ayman H., Farh, Kai-How, Farrell, Martilias S., Frank, Josef, Franke, Lude, Freedman, Robert, Freimer, Nelson B., Friedman, Joseph I., Forstner, Andreas J., Fromer, Menachem, Genovese, Giulio, Georgieva, Lyudmila, Gershon, Elliot S., Giegling, Ina, Giusti-Rodriguez, Paola, Godard, Stephanie, Goldstein, Jacqueline I., Gratten, Jacob, De Haan, Lieuwe, Hamshere, Marian L., Hansen, Mark, Hansen, Thomas, Haroutunian, Vahram, Hartmann, Annette M., Henskens, Frans A., Herms, Stefan, Hirschhorn, Joel N., Hoffmann, Per, Hofman, Andrea, Huang, Hailiang, Ikeda, Masashi, Joa, Inge, Kahler, Anna K., Kahn, René S., Kalaydjieva, Luba, Karjalainen, Juha, Kavanagh, David, Keller, Matthew C., Kelly, Brian J., Kennedy, James L., Kim, Yunjung, Knowles, James A., Konte, Bettina, Laurent, Claudine, Lee, Phil, Lee, S. Hong, Legge, Sophie E., Lerer, Bernard, Levy, Deborah L., Liang, Kung-Yee, Lieberman, Jeffrey, Lonnqvist, Jouko, Loughland, Carmel M., Magnusson, Patrik K. E., Maher, Brion S., Maier, Wolfgang, Mallet, Jacques, Mattheisen, Manuel, Mattingsdal, Morten, McCarley, Robert W., McDonald, Colm, McIntosh, Andrew M., Meier, Sandra, Meijer, Carin J., Melle, Ingrid, Mesholam-Gately, Raquelle I., Metspalu, Andres, Michie, Patricia T., Milani, Lili, Milanova, Vihra, Mokrab, Younes, Morris, Derek W., Muller-Myhsok, Bertram, Murphy, Kieran C., Murray, Robin M., Myin-Germeys, Inez, Nenadic, Igor, Nertney, Deborah A., Nestadt, Gerald, Nicodemus, Kristin K., Nisenbaum, Laura, Nordin, Annelie, O'Callaghan, Eadbhard, O'Dushlaine, Colm, Oh, Sang-Yun, Olincy, Ann, Olsen, Line, O'Neill, F. Anthony, Van Os, Jim, Pantelis, Christos, Papadimitriou, George N., Parkhomenko, Elena, Pato, Michele T., Paunio, Tiina, Perkins, Diana O., Pers, Tune H., Pietilainen, Olli, Pimm, Jonathan, Pocklington, Andrew J., Powell, John, Price, Alkes, Pulver, Ann E., Purcell, Shaun M., Quested, Digby, Rasmussen, Henrik B., Reichenberg, Abraham, Reimers, Mark A., Richards, Alexander L., Roffman, Joshua L., Roussos, Panos, Ruderfer, Douglas M., Salomaa, Veikko, Sanders, Alan R., Savitz, Adam, Schall, Ulrich, Schulze, Thomas G., Schwab, Sibylle G., Scolnick, Edward M., Scott, Rodney J., Seidman, Larry J., Shi, Jianxin, Silverman, Jeremy M., Smoller, Jordan W., Soderman, Erik, Spencer, Chris C. A., Stahl, Eli A., Strengman, Eric, Strohmaier, Jana, Stroup, T. Scott, Suvisaari, Jaana, Svrakic, Dragan M., Szatkiewicz, Jin P., Thirumalai, Srinivas, Tooney, Paul A., Veijola, Juha, Visscher, Peter M., Waddington, John, Walsh, Dermot, Webb, Bradley T., Weiser, Mark, Wildenauer, Dieter B., Williams, Nigel M., Williams, Stephanie, Witt, Stephanie H., Wolen, Aaron R., Wormley, Brandon K., Wray, Naomi R., Wu, Jing Qin, Zai, Clement C., Adolfsson, Rolf, Andreassen, Ole A., Blackwood, Douglas H. R., Bramon, Elvira, Buxbaum, Joseph D., Cichon, Sven, Collier, David A., Corvin, Aiden, Daly, Mark J., Darvasi, Ariel, Domenici, Enrico, Esko, Tõnu, Gejman, Pablo V., Gill, Michael, Gurling, Hugh, Hultman, Christina M., Iwata, Nakao, Jablensky, Assen V., Jonsson, Erik G., Kendler, Kenneth S., Kirov, George, Knight, Jo, Levinson, Douglas F., Li, Qingqin S., McCarroll, Steven A., McQuillin, Andrew, Moran, Jennifer L., Mowry, Bryan J., Nothen, Markus M., Ophoff, Roel A., Owen, Michael J., Palotie, Aarno, Pato, Carlos N., Petryshen, Tracey L., Posthuma, Danielle, Rietschel, Marcella, Riley, Brien P., Rujescu, Dan, Sklar, Pamela, St Clair, David, Walters, James T. R., Werge, Thomas, Sullivan, Patrick F., O'Donovan, Michael C., Scherer, Stephen W., Neale, Benjamin M. and Sebat, Jonathan (2017) Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. Nature Genetics, 49 1: 27-35. doi:10.1038/ng.3725

  • Ligthart, Symen, Marzi, Carola, Aslibekyan, Stella, Mendelson, Michael M., Conneely, Karen N., Tanaka, Toshiko, Colicino, Elena, Waite, Lindsay L., Joehanes, Roby, Guan, Weihua, Brody, Jennifer A., Elks, Cathy, Marioni, Riccardo, Jhun, Min A., Agha, Golareh, Bressler, Jan, Ward-Caviness, Cavin K., Chen, Brian H., Huan, Tianxiao, Bakulski, Kelly, Salfati, Elias L., Fiorito, Giovanni, Wahl, Simone, Schramm, Katharina, Sha, Jin, Hernandez, Dena G., Just, Allan C., Smith, Jennifer A., Sotoodehnia, Nona, Pilling, Luke C., Pankow, James S., Tsao, Phil S., Liu, Chunyu, Zhao, Wei, Guarrera, Simonetta, Michopoulos, Vasiliki J., Smith, Alicia K., Peters, Marjolein J., Melzer, David, Vokonas, Pantel, Fornage, Myriam, Prokisch, Holger, Bis, Joshua C., Chu, Audrey Y., Herder, Christian, Grallert, Harald, Yao, Chen, Shah, Sonia, McRae, Allan F., Lin, Honghuang, Horvath, Steve, Fallin, Daniele, Hofman, Albert, Wareham, Nicholas J., Wiggins, Kerri L., Feinberg, Andrew P., Starr, John M., Visscher, Peter M., Murabito, Joanne M., Kardia, Sharon L. R., Absher, Devin M., Binder, Elisabeth B., Singleton, Andrew B., Bandinelli, Stefania, Peters, Annette, Waldenberger, Melanie, Matullo, Giuseppe, Schwartz, Joel D., Demerath, Ellen W., Uitterlinden, André G., Van Meurs, Joyce B. J., Franco, Oscar H., Chen, Yii-Der Ida, Levy, Daniel, Turner, Stephen T., Deary, Ian J., Ressler, Kerry J., Dupuis, Josée, Ferrucci, Luigi, Ong, Ken K., Assimes, Themistocles L., Boerwinkle, Eric, Koenig, Wolfgang, Arnett, Donna K., Baccarelli, Andrea A., Benjamin, Emelia J. and Dehghan, Abbas (2016) DNA methylation signatures of chronic low-grade inflammation are associated with complex diseases. Genome Biology, 17 1: . doi:10.1186/s13059-016-1119-5

  • Kassam, Irfahan, Lloyd-Jones, Luke, Holloway, Alexander, Small, Kerrin S., Zeng, Biao, Bakshi, Andrew, Metspalu, Andres, Gibson, Greg, Spector, Tim D., Esko, Tonu, Montgomery, Grant W., Powell, Joseph E., Yang, Jian, Visscher, Peter M. and McRae, Allan F. (2016) Autosomal genetic control of human gene expression does not differ across the sexes. Genome Biology, 17 1: 248.1-248.10. doi:10.1186/s13059-016-1111-0

  • Liu, C., Marioni, R. E., Hedman, K., Pfeiffer, L., Tsai, P. -C., Reynolds, L. M., Just, A. C., Duan, Q., Boer, C. G., Tanaka, T., Elks, C. E., Aslibekyan, S., Brody, J. A., Kuhnel, B., Herder, C., Almli, L. M., Zhi, D., Wang, Y., Huan, T., Yao, C., Mendelson, M. M., Joehanes, R., Liang, L., Love, S. -A., Guan, W., Shah, S., McRae, A. F., Kretschmer, A., Prokisch, H., Strauch, K., Peters, A., Visscher, P. M., Wray, N. R., Guo, X., Wiggins, K. L., Smith, A. K., Binder, E. B., Ressler, K. J., Irvin, M. R., Absher, D. M., Hernandez, D., Ferrucci, L., Bandinelli, S., Lohman, K., Ding, J., Trevisi, L., Gustafsson, S., Sandling, J. H., Stolk, L., Uitterlinden, A. G., Yet, I., Castillo-Fernandez, J. E., Spector, T. D., Schwartz, J. D., Vokonas, P., Lind, L., Li, Y., Fornage, M., Arnett, D. K., Wareham, N. J., Sotoodehnia, N., Ong, K. K., van Meurs, J. B. J., Conneely, K. N., Baccarelli, A. A., Deary, I. J., Bell, J. T., North, K. E., Liu, Y., Waldenberger, M., London, S. J., Ingelsson, E. and Levy, D. (2016) A DNA methylation biomarker of alcohol consumption. Molecular Psychiatry, . doi:10.1038/mp.2016.192

  • Powell, Joseph E., Fung, Jenny N., Shakhbazov, Konstantin, Sapkota, Yadav, Cloonan, Nicole, Hemani, Gibran, Hillman, Kristine M., Kaufmann, Susanne, Luong, Hien T., Bowdler, Lisa, Painter, Jodie N., Holdsworth-Carson, Sarah J., Visscher, Peter M., Dinger, Marcel E., Healey, Martin, Nyholt, Dale R., French, Juliet D., Edwards, Stacey L., Rogers, Peter A. W. and Montgomery, Grant W. (2016) Endometriosis risk alleles at 1p36.12 act through inverse regulation of CDC42 and LINC00339. Human Molecular Genetics, 25 22: 5046-5058. doi:10.1093/hmg/ddw320

  • Cadzow, Murray, Merriman, Tony R., Boocock, James, Dalbeth, Nicola, Stamp, Lisa K., Black, Michael A., Visscher, Peter M. and Wilcox, Phillip L. (2016) Lack of direct evidence for natural selection at the candidate thrifty gene locus, PPARGC1A. BMC Medical Genetics, 17 1: . doi:10.1186/s12881-016-0341-z

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  • Calvin, Catherine M., Fernandes, Cres, Smith, Pauline, Visscher, Peter M. and Deary, Ian J. (2010) Sex, intelligence and educational achievement in a national cohort of over 175,000 11-year-old schoolchildren in England. Intelligence, 38 4: 424-432. doi:10.1016/j.intell.2010.04.005

  • Lee, Sang Hong, Goddard, Michael E., Visscher, Peter M. and van der Werf, Julius H. J. (2010) Using the realized relationship matrix to disentangle confounding factors for the estimation of genetic variance components of complex traits. Genetics Selection Evolution, 42 22.1-22.14. doi:10.1186/1297-9686-42-22

  • Houlihan, Lorna M., Davies, Gail, Tenesa, Albert, Harris, Sarah E., Luciano, Michelle, Gow, Alan J., McGhee, Kevin A., Liewald, David C., Porteous, David J., Starr, John M., Lowe, Gordon D., Visscher, Peter M. and Deary, Ian J. (2010) Common Variants of Large Effect in F12, KNG1, and HRG Are Associated with Activated Partial Thromboplastin Time. American Journal of Human Genetics, 86 4: 626-631. doi:10.1016/j.ajhg.2010.02.016

  • Yang, Jian, Wray, Naomi R. and Visscher, Peter M. (2010) Comparing apples and oranges: Equating the power of case-control and quantitative trait association studies. Genetic Epidemiology, 34 3: 254-257. doi:10.1002/gepi.20456

  • Wray, Naomi R., Yang, Jian, Goddard, Michael E. and Visscher, Peter M. (2010) The Genetic Interpretation of Area under the ROC Curve in Genomic Profiling. PLoS Genetics, 6 2: e1000864.1-e1000864.9. doi:10.1371/journal.pgen.1000864

  • Webbink, Dinand, Martin, Nicholas G. and Visscher, Peter M. (2010) Does education reduce the probability of being overweight?. Journal of Health Economics, 29 1: 29-38. doi:10.1016/j.jhealeco.2009.11.013

  • Idaghdour, Youssef, Czika, Wendy, Shianna, Kevin V., Lee, Sang H., Visscher, Peter M., Martin, Hilary C., Miclaus, K, Jadallah, Sami J., Goldstein, David B., Wolfinger, Russell D. and Gibson, Greg (2010) Geographical genomics of human leukocyte gene expression variation in southern Morocco. Nature Genetics, 42 1: 62-67. doi:10.1038/ng.495

  • Macgregor, Stuart, Bellis, Claire, Lea, Rod A., Cox, Hannah, Dyer, Tom, Blangero, John, Visscher, Peter M. and Griffiths, Lyn R. (2010) Legacy of mutiny on the Bounty: founder effect and admixture on Norfolk Island. European Journal of Human Genetics, 18 1: 67-72. doi:10.1038/ejhg.2009.111

  • Wray, Naomi R. and Visscher, Peter M. (2010) Narrowing the Boundaries of the Genetic Architecture of Schizophrenia. Schizophrenia Bulletin, 36 1: 14-23. doi:10.1093/schbul/sbp137

  • Posthuma, Danielle, de Koning, Dirk-Jan, Dolan, Conor, Goddard, Michael E. and Visscher, Peter M. (2009) A Note on Permutation Tests for Genetic Association Analysis of Quantitative Traits When Variances Are Heterogeneous. Genetic Epidemiology, 33 8: 710-716. doi:10.1002/gepi.20423

  • McEvoy, Brian P. and Visscher, Peter M. (2009) Genetics of human height. Economics & Human Biology, 7 3: 294-306. doi:10.1016/j.ehb.2009.09.005

  • Benyamin, B, Ferreira, MAR, Willemsen, G, Gordon, S, Middelberg, RPS, McEvoy, BP, Hottenga, JJ, Henders, AK, Campbell, MJ, Wallace, L, Frazer, IH, Heath, AC, de Geus, EJC, Nyholt, DR, Visscher, PM, Penninx, BW, Boomsma, DI, Martin, NG, Montgomery, GW and Whitfield, JB (2009) Common variants in TMPRSS6 are associated with iron status and erythrocyte volume. Nature Genetics, 41 11: 1173-1175. doi:10.1038/ng.456

  • Goddard, Michael E., Wray, Naomi R., Verbyla, Klara and Visscher, Peter M. (2009) Estimating Effects and Making Predictions from Genome-Wide Marker Data. Statistical Science, 24 4: 517-529. doi:10.1214/09-STS306

  • Visscher, Peter M. and Montgomery, Grant W. (2009) Genome-wide Association Studies and Human Disease From Trickle to Flood. Jama-Journal of the American Medical Association, 302 18: 2028-2029.

  • Nagamine, Yoshitaka, Pong-Wong, Ricardo, Visscher, Peter M. and Haley, Chris S. (2009) Detection of multiple quantitative trait loci and their pleiotropic effects in outbred pig populations. Genetics Selection Evolution, 41 . doi:10.1186/1297-9686-41-44

  • Manolio, T.A., Collins, F.S., Cox, N.J., Goldstein, D.B., Hindorff, L.A., Hunter, D.J., McCarthy, M.I., Ramos, E.M., Cardon, L.R., Chakravarti, A., Cho, J.H., Guttmacher, A.E., Kong, A., Kruglyak, L., Mardis, E., Rotimi,C.N., Slatkin, M., Valle, D., Whittemore, A.S., Boehnke, M., Clarke, A.G., Eichler, E.E., Gibson, G.C., Haines, J.L., Mackay, T.F.C., McCarroll, S.A. and Visscher, P.M. (2009) Finding the missing heritability of complex diseases. Nature, 461 7265: 747-753. doi:10.1038/nature08494

  • Jamie E. Craig, Alex W. Hewitt, Amy E. McMellon, Anjali K. Henders, Lingjun Ma, Leanne Wallace, Shiwani Sharma, Kathryn P. Burdon, Peter M. Visscher, Grant W. Montgomery and Stuart MacGregor (2009) Rapid inexpensive genome-wide association using pooled whole blood. Genome Research, 19 11: 2075-2080. doi:10.1101/gr.094680.109

  • Visscher, Peter M. and Hill, William G. (2009) The Limits of Individual Identification from Sample Allele Frequencies: Theory and Statistical Analysis. Plos Genetics, 5 10: . doi:10.1371/journal.pgen.1000628

  • E. M. Byrne, A. F. McRae, D. L. Duffy, Z. Z. Zhao, N. G. Martin, J. B. Whitfield, P. M. Visscher and G. W. Montgomery (2009) Family-based mitochondrial association study of traits related to type 2 diabetes and the metabolic syndrome in adolescents. Diabetologia, 52 11: 2359-2368. doi:10.1007/s00125-009-1510-9

  • Byrne, EM, McRae, AF, Duffy, DL, Zhao, ZZ, Martin, NG, Wright, MJ, Montgomery, GW and Visscher, PM (2009) Association Study of Common Mitochondrial Variants and Cognitive Ability. BEHAVIOR GENETICS, 39 5: 504-512. doi:10.1007/s10519-009-9276-x

  • Matthew C. Keller, Allan F. McRae, Julie M. McGaughran, Peter M. Visscher, Nicholas G. Martin and Grant W. Montgomery (2009) Non-pathological paternal isodisomy of chromosome 2 detected from a genome-wide SNP scan.. American Journal of Medical Genetics. Part A, 149A 8: 1823-1826. doi:10.1002/ajmg.a.32973

  • Brian P. McEvoy, Grant W. Montgomery, Allan F. McRae, Samuli Ripatti, Markus Perola, Tim D. Spector, Lynn Cherkas, Kourosh R. Ahmadi, Dorret Boomsma, Gonneke Willemsen, Jouke J. Hottenga, Nancy L. Pedersen, Patrik K.E. Magnusson, Kirsten Ohm Kyvik, Kaare Christensen, Jaakko Kaprio, Kauko Heikkilä, Aarno Palotie, Elisabeth Widen, Juha Muilu, Ann-Christine Syvänen, Ulrika Liljedahl, Orla Hardiman, Simon Cronin, Leena Peltonen, Nicholas G. Martin and Peter M. Visscher (2009) Geographical structure and differential natural selection among North European populations. Genome Research, 19 5: 804-814. doi:10.1101/gr.083394.108

  • Calvin, Catherine, Fernandes, Cres, Smith, Pauline, Visscher, Peter M. and Deary, Ian J. (2009) Is there still a cognitive cost of being a twin in the UK?. Intelligence, 37 3: 243-248. doi:10.1016/j.intell.2008.12.005

  • Allison, David B., Visscher, Peter M., Rosa, Guilherme J. M. and Amos, Christopher I. (2009) Statistical genetics & statistical genomics: Where biology, epistemology, statistics, and computation collide. Computational Statistics & Data Analysis, 53 5: 1531-1534. doi:10.1016/j.csda.2009.01.005

  • Luciano, Michelle, Gow, Alan J., Harris, Sarah E., Hayward, Caroline, Allerhand, Mike, Starr, John M., Visscher, Peter M. and Deary, Ian J. (2009) Cognitive Ability at Age 11 and 70 Years, Information Processing Speed, and APOE Variation: The Lothian Birth Cohort 1936 Study. Psychology and Aging, 24 1: 129-138. doi:10.1037/a0014780

  • Houlihan, L. M., Harris, S. E., Luciano, M., Gow, A. J., Starr, J. M., Visscher, P. M. and Deary, I. J. (2009) Replication study of candidate genes for cognitive abilities: the Lothian Birth Cohort 1936. Genes Brain and Behavior, 8 2: 238-247. doi:10.1111/j.1601-183X.2008.00470.x

  • M. Luciano, F. Miyajima, P. A. Lind, T. C. Bates, M. Horan, S. E. Harris, M. J. Wright, W. E. Ollier, C. Hayward, N. Pendleton, A. J. Gow, P. M. Visscher, J. M. Starr, I. J. Deary, N. G. Martin and A. Payton (2009) Variation in the dysbindin gene and normal cognitive function in three independent population samples. Genes, Brain and Behavior, 8 2: 218-227. doi:10.1111/j.1601-183X.2008.00462.x

  • Chenoweth, SF and Visscher, PM (2009) Association Mapping in Outbred Populations: Power and Efficiency When Genotyping Parents and Phenotyping Progeny. Genetics, 181 2: 755-765. doi:10.1534/genetics.108.099218

  • Benyamin, Beben, Visscher, Peter M. and McRae, Allan F. (2009) Family-based genome-wide association studies. Pharmacogenomics, 10 2: 181-190. doi:10.2217/14622416.10.2.181

  • Hayes, B. J., Visscher, P. M. and Goddard, M. E. (2009) Increased accuracy of artificial selection by using the realized relationship matrix. Genetics Research, 91 1: 47-60. doi:10.1017/S0016672308009981

  • Zachary A Kaminsky, Thomas Tang, Sun-Chong Wang, Carolyn Ptak, Gabriel H T Oh, Albert H C Wong, Laura A Feldcamp, Carl Virtanen, Jonas Halfvarson, Curt Tysk, Allan F McRae, Peter M Visscher, Grant W Montgomery, Irving I Gottesman, Nicholas G Martin and Art Petronis (2009) DNA methylation profiles in monozygotic and dizygotic twins. Nature Genetics, 41 2: 240-245. doi:10.1038/ng.286

  • Beben Benyamin, Allan F. McRae, Gu Zhu, Scott Gordon, Anjali K. Henders, Aarno Palotie, Leena Peltonen, Nicholas G. Martin, Grant W. Montgomery, John B. Whitfield and Peter M. Visscher (2009) Variants in TF and HFE Explain 40% of Genetic Variation in Serum-Transferrin Levels. American Journal of Human Genetics, 84 1: 60-65. doi:10.1016/j.ajhg.2008.11.011

  • Knight, Helen M., Pickard, Benjamin S., Maclean, Alan, Malloy, Mary P., Soares, Dinesh C., McRae, Allan F., Condie, Alison, White, Angela, Hawkins, William, McGhee, Kevin, van Beck, Margaret, MacIntyre, Donald J., Starr, John M., Deary, Ian J., Visscher, Peter M., Porteous, David J., Cannon, Ronald E., St Clair, David, Muir, Walter J. and Blackwood, Douglas H. R. (2009) A cytogenetic abnormality and rare coding variants identify ABCA13 as a candidate gene in schizophrenia, bipolar disorder, and depression. American Journal of Human Genetics, 85 6: 833-846. doi:10.1016/j.ajhg.2009.11.003

  • Luciano, Michelle, Gow, Alan J., Taylor, Michelle D., Hayward, Caroline, Harris, Sarah E., Campbell, Harry, Porteous, David J., Starr, John M., Visscher, Peter M. and Deary, Ian J. (2009) Apolipoprotein E is not Related to Memory Abilities at 70 Years of Age. Behavior Genetics, 39 1: 6-14. doi:10.1007/s10519-008-9236-x

  • Evans, David M., Visscher, Peter M. and Wray, Naomi R. (2009) Harnessing the information contained within genome-wide association studies to improve individual prediction of complex disease risk. Human Molecular Genetics, 18 18: 3525-3531. doi:10.1093/hmg/ddp295

  • Sved, John A., McRae, Allan F. and Visscher, Peter M. (2008) Divergence between human populations estimated from linkage disequilibrium. American Journal of Human Genetics, 83 6: 737-743. doi:10.1016/j.ajhg.2008.10.019

  • Hasselbalch, Ann L., Benyamin, Beben, Visscher, Peter M., Heitmann, Berit L., Kyvik, Kirsten O. and Sorensen, Thorkild I. A. (2008) Common genetic components of obesity traits and serum leptin. Obesity, 16 12: 2723-2729. doi:10.1038/oby.2008.440

  • Webbink, Dinand, Posthuma, Danielle, Boomsma, Dorret I., de Geus, Eco J. C. and Visscher, Peter M. (2008) Do twins have lower cognitive ability than singletons?. Intelligence, 36 6: 539-547. doi:10.1016/j.intell.2007.12.002

  • Byrne, Enda M., Mcrae, Allan F., Zhao, Zhen-Zhen, Martin, Nicholas G., Montgomery, Grant W. and Visscher, Peter M. (2008) The use of common mitochondrial variants to detect and characterise population structure in the Australian population: Implications for genome-wide association studies. European Journal of Human Genetics, 16 11: 1396-1403. doi:10.1038/ejhg.2008.117

  • Anderson, Carl A., Zhu, Gu, Falchi, Mario, van den Berg, Stéphanie M., Treloar, Susan A., Spector, Timothy D., Martin, Nicholas G., Boomsma, Dorret I., Visscher, Peter M. and Montgomery, Grant W. (2008) A genome-wide linkage scan for age at menarche in three populations of European descent. Journal of Clinical Endocrinology and Metabolism., 93 10: 3965-3970. doi:10.1210/jc.2007-2568

  • Hur, Y-M, Kaprio, J., Iacono, W. G., Boomsma, D. I., McGgue, M., Silventoinen, K., Martin, N. G., Luciano, M., Visscher, P. M., Rose, R. J., He, M., Ando, J., Ooki, S., Nonaka, K., Lin, C. C. H., Lajunen, H. R., Cornes, B. K., Bartels, M., van Beijsterveldt, C. E. M., Cherny, S. S. and Mitchell, K. (2008) Genetic influences on the difference in variability of height, weight and body mass index between Caucasian and East Asian adolescent twins. International Journal of Obesity, 32 10: 1455-1467. doi:10.1038/ijo.2008.144

  • Lee, Sang Hong, van der Werf, Julius H. J., Hayes, Ben J., Goddard, Michael E. and Visscher, Peter M. (2008) Predicting unobserved phenotypes for complex traits from whole-genome SNP data. PLoS Genetics, 4 10: . doi:10.1371/journal.pgen.1000231

  • Macgregor, Stuart, Hottenga, Jouke-Jan, Lind, Penelope A., Suchiman, H. Eka D., Willemsen, Gonneke, Slagboom, P. Eline, Montgomery, Grant W., Martin, Nicholas G., Visscher, Peter M. and Boomsma, Dorret I. (2008) Vitamin D receptor gene polymorphisms have negligible effect on human height. Twin Research and Human Genetics, 11 5: 488-494. doi:10.1375/twin.11.5.488

  • Stone, Jennifer L., O'Donovan, Michael C., Gurling, Hugh, Kirov, George K., Blackwood, Douglas H. R., Corvin, Aiden, Craddock, Nick J., Gill, Michael, Hultman, Christina M., Lichtenstein, Paul, McQuillin, Andrew, Pato, Carlos N., Ruderfer, Douglas M., Owen, Michael J., St Clair, David, Sullivan, Patrick F., Sklar, Pamela, Purcell, Shaun M., Scolnick, E. M., Holmans, P. A., Georgieva, L., Nikolov, I., Norton, N., Williams, H., Williams, N. M., Toncheva, D., Milanova, V., Thelander, E. F., Morris, D. W., O'Dushlaine, C. T., Kenny, E., Waddington, J. L., Choudhury, K., Datta, S., Pimm, J., Thirumalai, S., Puri, V., Krasucki, R., Lawrence, J., Quested, D., Bass, N., Curtis, D., Crombie, C., Fraser, G., Kwan, S. L., Muir, W. J., McGhee, K. A., Pickard, B., Malloy, P., Maclean, A. W., Van Beck, M, Visscher, P. M., Macgregor, S., Pato, M. T., Medeiros, H., Middleton, F., Carvalho, C., Morley, C., Fanous, A., Conti, D., Knowles, J. A., Ferreira, C. P., Azevedo, M. H., McCarrol, S. A., Gates, C., Daly, M. J. and Sklar, P. (2008) Rare chromosomal deletions and duplications increase risk of schizophrenia. Nature, 455 7210: 237-241. doi:10.1038/nature07239

  • Keith, Jonathan M., McRae, Allan, Duffy, David, Mengersen, Kerrie and Visscher, Peter M. (2008) Calculation of IBD probabilities with dense SNP or sequence data. Genetic Epidemiology, 32 6: 513-519. doi:10.1002/gepi.20324

  • Oldmeadow, Chris, Wood, Ian, Mengersen, Kerrie, Visscher, Peter M., Martin, Nicholas G. and Duffy, David L. (2008) Investigation of the relationship between smoking and appendicitis in Australian twins. Annals of Epidemiology, 18 8: 631-636. doi:10.1016/j.annepidem.2008.04.004

  • Webbink, Dinand, Martin, Nicholas G. and Visscher, Peter M. (2008) Does teenage childbearing increase smoking, drinking and body size?. Journal of Health Economics, 27 4: 888-903. doi:10.1016/j.jhealeco.2008.02.005

  • Dolezal, M., Schwarzenbacher, H., Soller, M., Soelkner, J. and Visscher, P. M. (2008) Multiple-marker mapping for selective DNA pooling within large families. Journal of Dairy Science, 91 7: 2864-2873. doi:10.3168/jds.2007-0397

  • McRae, Allan F., Byrne, Enda M., Zhao, Zhen Zhen, Montgomery, Grant W. and Visscher, Peter M. (2008) Power and SNP tagging in whole mitochondrial genome association studies. Genome Research, 18 6: 911-917. doi:10.1101/gr.074872.107

  • Edmonds, Caroline J., Isaacs, Elizabeth B., Visscher, Peter M., Rogers, Mary, Lanigan, Julie, Singhal, Atul, Lucas, Alan, Gringras, Paul, Denton, Jane and Deary, Ian J. (2008) Inspection time and cognitive abilities in twins aged 7 to 17 years: Age-related changes, heritability and genetic covariance. Intelligence, 36 3: 210-225. doi:10.1016/j.intell.2007.05.004

  • Visscher, Peter M. (2008) Sizing up human height variation. Nature Genetics, 40 5: 489-490. doi:10.1038/ng0508-489

  • Anderson, Carl A., Maclean, Alan, Dunnigan, Matthew G., Pelosi, Anthony J., Murray, Valerie, Mckee, Irene, McDonald, George, Burt, David W., Morrice, David R., Muir, Walter J., Visscher, Peter M. and Blackwood, Douglas H. R. (2008) A genome-wide linkage study in families with major depression and co-morbid unexplained swelling. American Journal of Medical Genetics Part B-Neuropsychiatric Genetics, 147 3: 356-362. doi:10.1002/ajmg.b.30615

  • Benyamin, Beben, Perola, Markus, Cornes, Belinda K., Madden, Pamela A. F., Palotie, Aarno, Nyholt, Dale R., Montgomery, Grant W., Peltonen, Leena, Martin, Nicholas G. and Visscher, Peter M. (2008) Within-family outliers: segregating alleles or environmental effects? A linkage analysis of height from 5815 sibling pairs. European Journal of Human Genetics, 16 4: 516-524. doi:10.1038/sj.ejhg.5201992

  • Nagamine, Yoshitaka, Nirasawa, Keijiro, Takahashi, Hideaki, Sasaki, Osamu, Ishii, Kazuo, Minezawa, Mitsuru, Oda, Senichi, Visscher, Peter M. and Furukawa, Tsutomu (2008) Estimation of the time of divergence between Japanese Mishima island cattle and other cattle populations using microsatellite DNA markers. Journal of Heredity, 99 2: 202-207. doi:10.1093/jhered/esm129

  • Visscher, Peter M., Andrew, Toby and Nyholt, Dale R. (2008) Genome-wide association studies of quantitative traits with related individuals: little (power) lost but much to be gained. European Journal of Human Genetics, 16 3: 387-390. doi:10.1038/sj.ejhg.5201990

  • Hill, William G., Goddard, Michael E. and Visscher, Peter M. (2008) Data and theory point to mainly additive genetic variance for complex traits. PLoS Genetics, 4 2: . doi:10.1371/journal.pgen.1000008

  • Avendano, S., Visscher, P. M. and Villanueva, B. (2008) Response to selection from using identified genes and quadratic indices in two-traits breeding goals. Spanish Journal of Agricultural Research, 6 88-97. doi:10.5424/sjar/200806S1-377

  • Gratten, J., Wilson, A. J., McRae, A. F., Beraldi, D., Visscher, P. M., Pemberton, J. M. and Slate, J. (2008) A localized negative genetic correlation constrains microevolution of coat color in wild sheep. Science, 319 5861: 318-320. doi:10.1126/science.1151182

  • Wray, Naomi R., Middeldorp, Christel M., Birley, Andrew J., Gordon, Scott D., Sullivan, Patrick F., Visscher, Peter M., Nyholt, Dale R, Willemsen, Gonneke, de Geus, Eco J.C., Slagboom, P. Eline, Montgomery, Grant W., Martin, Nicholas G. and Boomsma, Dorret I. (2008) Genome-wide linkage analysis of multiple measures of neuroticism of 2 large cohorts from Australia and the Netherlands. Archives of General Psychiatry, 65 6: 649-658. doi:10.1001/archpsyc.65.6.649

  • Visscher, Peter, Hill, William G. and Wray, Naomi (2008) Heritability in the genomics era — concepts and misconceptions. Nature Reviews Genetics, 9 4: 255-266. doi:10.1038/nrg2322

  • Macgregor, Stuart, Zhao, Zhen Zhen, Henders, Anjali, Martin, Nicholas G., Montgomery, Grant W. and Visscher, Peter M. (2008) Highly cost-efficient genome-wide association studies using DNA pools and dense SNP arrays. Nucleic Acids Research, 36 6: . doi:10.1093/nar/gkm1060

  • Ayub, Muhammad, Irfan, Muhammad, Maclean, Alan, Naeem, Farooq, MacGregor, Stuart, Visscher, Peter M., Muir, Walter and Blackwood, Douglas (2008) Linkage analysis in a large family from Pakistan with depression and a high incidence of consanguineous marriages. Human Heredity, 66 3: 190-198. doi:10.1159/000135265

  • Wray, Naomi, Goddard, Michael E. and Visscher, Peter (2008) Prediction of individual genetic risk of complex disease. Current Opinion in Genetics and Development, 18 3: 257-263. doi:10.1016/j.gde.2008.07.006

  • Luciano, Michelle, Lind, Penelope A., Deary, Ian J., Payton, Antony, Posthuma, Danielle, Butcher, Lee M., Bochdanovits, Zoltan, Whalley, Lawrence J., Visscher, Peter M., Harris, Sarah E., Polderman, Tinca J. C., Davis, Oliver S. P., Wright, Margaret J., Starr, John M., de Geus, Eco J. C., Bates, Timothy C., Montgomery, Grant W., Boomsma, Dorret I., Martin, Nicholas G. and Plomin, Robert (2008) Testing replication of a 5-SNP set for general cognitive ability in six population samples. European Journal of Human Genetics, 16 11: 1388-1395. doi:10.1038/ejhg.2008.100

  • Thornblad, Tobias A., Elliott, Kate S., Jowett, Jeremy and Visscher, Peter M. (2007) Prioritization of positional candidate genes using multiple web-based software tools. Twin Research and Human Genetics, 10 6: 861-870. doi:10.1375/twin.10.6.861

  • Visscher, Peter M., Macgregor, Stuart, Benyamin, Beben, Zhu, Gu, Gordon, Scott, Medland, Sarah, Hill, William G., Hottenga, Jouke-Jan, Willemsen, Gonneke, Boomsma, Dorret I., Liu, Yao-Zhong, Deng, Hong-Wen, Montgomery, Grant W. and Martin, Nicholas G. (2007) Genome partitioning of genetic variation for height from 11,214 sibling pairs. American Journal of Human Genetics, 81 5: 1104-1110. doi:10.1086/522934

  • Visscher, Peter M. and Duffy, David L. (2007) The value of relatives with phenotypes but missing genotypes in association studies for quantitative traits (vol 30, pg 30, 2006). Genetic Epidemiology, 31 7: 801-801. doi:10.1002/gepi.20268

  • Benyamin, B., Sorensen, T. I. A., Schousboe, K., Fenger, M., Visscher, P. M. and Kyvik, K. O. (2007) Are there common genetic and environmental factors behind the endophenotypes associated with the metabolic syndrome?. Diabetologia, 50 9: 1880-1888. doi:10.1007/s00125-007-0758-1

  • Anderson, Carl A., Duffy, David L., Martin, Nicholas G. and Visscher, Peter M. (2007) Estimation of variance components for age at menarche in twin families. Behavior Genetics, 37 5: 668-677. doi:10.1007/s10519-007-9163-2

  • Webbink, Dinand, Hay, David and Visscher, Peter M. (2007) Does sharing the same class in school improve cognitive abilities of twins?. Twin Research and Human Genetics, 10 4: 573-580. doi:10.1375/twin.10.4.573

  • Perola, Markus, Sammalisto, Sampo, Hiekkalinna, Tero, Martin, Nick G., Visscher, Peter M., Montgomery, Grant W., Benyamin, Beben, Harris, Jennifer R., Boomsma, Dorret, Willemsen, Gonneke, Hottenga, Jouke-Jan, Christensen, Karre, Kyvik, Kirsten Ohm, Sorensen, Thorkild I., Pedersen, Nancy L., Magnusson, Patrik K., Spector, Tim D., Widen, Elisabeth, Silventoinen, Karri, Kaprio, Jaakko, Palotie, Aarno, Peltonen, Leena and GenomEUtwin Project (2007) Combined genome scans for body stature in 6,602 European twins: Evidence for common Caucasian loci. PLoS Genetics, 3 6: 1019-1028. doi:10.1371/journal.pgen.0030097

  • Beraldi, Dario, McRae, Allan F., Gratten, Jacob, Slate, Jon, Visscher, Peter M. and Pemberton, Josephine M. (2007) Mapping quantitative trait loci underlying fitness-related traits in a free-living sheep population. Evolution, 61 6: 1403-1416. doi:10.1111/j.1558-5646.2007.00106.x

  • Gratten, J., Beraldi, D., Lowder, B. V., McRae, A. F., Visscher, P. M., Pemberton, J. M. and Slate, J. (2007) Compelling evidence that a single nucleotide substitution in TYRP1 is responsible for coat-colour polymorphism in a free-living population of Soay sheep. Proceedings of the Royal Society of London: Biological Sciences, 274 1610: 619-626. doi:10.1098/rspb.2006.3762

  • Gordon, Scott and Visscher, Peter M. (2007) Residual linkage: why do linkage peaks not disappear after an association study?. Human Genetics, 121 1: 77-82. doi:10.1007/s00439-006-0278-y

  • McRae, A. F., Matigian, N. A., Vadlamudi, L., Mulley, J. C., Mowry, B., Martin, N. G., Berkovic, S. F., Hayward, N. K. and Visscher, P. M. (2007) Replicated effects of sex and genotype on gene expression in human lymphoblastoid cell lines. Human Molecular Genetics, 16 4: 364-373. doi:10.1093/hmg/ddl456

  • Benyamin, Beben, Martin, Ian C. A., Cheung, Carol C., Buckley, Michael F., Thomson, Peter C., Visscher, Peter M. and Moran, Chris (2007) Bodyweight QTL on mouse chromosomes 4 and 11 by selective genotyping: regression v. maximum likelihood. Australian Journal of Experimental Agriculture, 47 6: 677-682. doi:10.1071/EA06123

  • Wood, I. A., Visscher, P. M. and Mengersen, K. L. (2007) Classification based upon gene expression data: bias and precision of error rates. Bioinformatics, 23 11: 1363-1370. doi:10.1093/bioinformatics/btm117

  • Wray, N. R., Birley, A. J., Sullivan, P. F., Visscher, P. M. and Martin, N. G. (2007) Genetic and phenotypic stability of measures of neuroticism over 22 years. Twin Research & Human Genetics, 10 5: 695-702. doi:10.1375/twin.10.5.695

  • Mcgee, TR (2007) Introduction to social research: Quantitative and qualitative approaches. Journal of Sociology, 43 3: 324-326. doi:10.1177/14407833070110030604

  • Wray, Naomi R., Goddard, Michael E. and Visscher, Peter M. (2007) Prediction of individual genetic risk to disease from genome-wide association studies. Genome Research, 17 10: 1520-1528. doi:10.1101/gr.6665407

  • Beraldi, Dario, McRae, Allan F., Gratten, Jacob, Slate, Jon, Visscher, Peter M., Pemberton, Josephine M. and Pilkington, Jill G. (2007) Quantitative trait loci (QTL) mapping of resistance to strongyles and coccidia in the free-living Soay sheep (Ovis aries). Journal of Parasitology, 37 1: 121-129. doi:10.1016/j.ijpara.2006.09.007

  • Tenesa, Albert, Navarro, Pau, Hayes, Ben J., Duffy, David L., Clarke, Geraldine M., Goddard, Mike E. and Visscher, Peter M. (2007) Recent human effective population size estimated from linkage disequilibrium. Genome Research, 17 4: 520-526. doi:10.1101/gr.6023607

  • Ivkovic, Vladimir, Vitart, Veronique, Rudan, Igor, Janicijevic, Branka, Smolej-Narancic, Nina, Skaric-Juric, Tatjana, Barbalic, Maja, Polasek, Ozren, Kolcic, Ivana, Biloglav, Zrinka, Visscher, Peter M., Hayward, Caroline, Hastie, Nicholas D., Anderson, Niall, Campbell, Harry, Wright, Alan F., Rudan, Pavao and Deary, Ian J. (2007) The Eysenck personality factors: Psychometric structure, reliability, heritability and phenotypic and genetic correlations with psychological distress in an isolated Croatian population. Personality and Individual Differences, 42 1: 123-133. doi:10.1016/j.paid.2006.06.025

  • Visscher, P. M. (2007) Variation of estimates of SNP and haplotype diversity and linkage disequilibrium in samples from the same population due to experimental and evolutionary sample size. Annals of Human Genetics, 71 119-126. doi:10.1111/j.1469-1809.2006.00305.x

  • Navarro, P., Visscher, P. M., Chatziplis, D., Koerhuis, A. N. M. and Haley, C. S. (2006) Genetic parameters for blood oxygen saturation, body weight and breast conformation in 4 meat-type chicken lines. British Poultry Science, 47 6: 659-670. doi:10.1080/00071660601042372

  • Navarro, P., Visscher, P. M., Chatziplis, D., Koerhuis, A. N. M. and Haley, C. S. (2006) Segregation analysis of blood oxygen saturation in broilers suggests a major gene influence on ascites. British Poultry Science, 47 6: 671-684. doi:10.1080/00071660601077931

  • Benyamin, Beben, Deary, Ian J. and Visscher, Peter M. (2006) Precision and bias of a normal finite mixture distribution model to analyze twin data when zygosity is unknown: simulations and application to IQ phenotypes on a large sample of twin pairs. Behavior Genetics, 36 6: 935-946. doi:10.1007/s10519-006-9086-3

  • Visscher, Peter M. (2006) A note on the asymptotic distribution of likelihood ratio tests to test variance components. Twin Research and Human Genetics, 9 4: 490-495. doi:10.1375/183242706778024928

  • Ferreira, Manuel A. R., Visscher, Peter M., Martin, Nicholas G. and Duffy, David L. (2006) A simple method to localise pleiotropic susceptibility loci using univariate linkage analyses of correlated traits. European Journal of Human Genetics, 14 8: 953-962. doi:10.1038/sj.ejhg.5201646

  • Visscher, Peter M. and Hill, William G. (2006) Estimation of recombination rate and detection of recombination hotspots from dense single-nucleotide polymorphism trio data. Genetics, 173 4: 2415-2417. doi:10.1534/genetics.106.056531

  • Webbink, Dinand, Roeleveld, Jaap and Visscher, Peter M. (2006) Identification of twin pairs from large population-based samples. Twin Research and Human Genetics, 9 4: 496-500. doi:10.1375/183242706778024892

  • Anderson, Carl A., McRae, Allan F. and Visscher, Peter M. (2006) A simple linear regression method for quantitative trait loci linkage analysis with censored observations. Genetics, 173 3: 1735-1745. doi:10.1534/genetics.106.055921

  • Beraldi, Dario, McRae, Allan F., Gratten, Jacob, Slate, Jon, Visscher, Peter M. and Pemberton, Josephine M. (2006) Development of a linkage map and mapping of phenotypic polymorphisms in a free-living population of Soay sheep (Ovis aries). Genetics, 173 3: 1521-1537. doi:10.1534/genetics.106.057141

  • Visscher, Peter M., Medland, Sarah E., Ferreira, Manuel A. R., Morley, Katherine I., Zhu, Gu, Cornes, Belinda K., Montgomery, Grant W. and Martin, Nicholas G. (2006) Assumption-free estimation of heritability from genome-wide identity-by-descent sharing between full siblings. Plos Genetics, 2 3: 316-325. doi:10.1371/journal.pgen.0020041

  • Macgregor, S, Knott, SA and Visscher, PM (2006) False disease region identification from identity-by-descent haplotype sharing in the presence of phenocopies. Twin Research and Human Genetics, 9 1: 9-16.

  • Macgregor, S, Visscher, PM and Montgomery, G (2006) Analysis of pooled DNA samples on high density arrays without prior knowledge of differential hybridization rates. Nucleic Acids Research, 34 7: . doi:10.1093/nar/gkl136

  • Macgregor, Stuart, Cornes, Belinda K., Martin, Nicholas G. and Visscher, Peter M. (2006) Bias, precision and heritability of self-reported and clinically measured height in Australian twins. Human Genetics, 120 4: 571-580. doi:10.1007/s00439-006-0240-z

  • Montgomery, Grant W., Zhu, Gu, Hottenga, Jouke J., Duffy, David L., Heath, Andrew C., Boomsma, Dorret I., Martin, Nicholas G. and Visscher, Peter M. (2006) HLA and Genomewide Allele Sharing in Dizygotic Twins. American Journal of Human Genetics, 79 6: 1052-1058. doi:10.1086/510136

  • Posthuma, D., Visscher, P. M., Willemsen, G., Zhu, G., Martin, N. G., Slagboom, P. E., de Geus, E. J. C. and Boomsma, D. I. (2006) Replicated linkage for eye color on 15q using comparative ratings of sibling pairs. Behavior Genetics, 36 1: 12-17. doi:10.1007/s10519-005-9007-x

  • Ferreira, MAR, O'Gorman, L, Le Souef, P, Burton, PR, Toelle, BG, Robertson, CF, Visscher, PM, Martin, NG and Duffy, DL (2005) Robust estimation of experimentwise P values applied to a genome scan of multiple asthma traits identifies a new region of significant linkage on chromosome 20q13. American Journal of Human Genetics, 77 6: 1075-1085. doi:10.1086/497997

  • Macgregor, S, Knott, SA, White, and Visscher, PM (2005) Quantitative trait locus analysis of longitudinal quantitative trait data in complex pedigrees. Genetics, 171 3: 1365-1376. doi:10.1534/genetics.105.043828

  • Benyamin, Beben, Wilson, Valerie, Whalley, Lawrence J., Visscher, Peter M. and Deary, Ian J. (2005) Large, consistent estimates of the heritability of cognitive ability in two entire populations of 11-year-old twins from Scottish mental surveys of 1932 and 1947. Behavior Genetics, 35 5: 525-534. doi:10.1007/s10519-005-3556-x

  • McRae, AF, Pemberton, JM and Visscher, PM (2005) Modeling linkage disequilibrium in natural populations: The example of the Soay sheep population of St. Kilda, Scotland. Genetics, 171 1: 251-258. doi:10.1534/genetics.105.040972

  • Navarro, P, Visscher, PM, Knott, SA, Burt, DW, Hocking, PM and Haley, CS (2005) Mapping of quantitative trait loci affecting organ weights and blood variables in a broiler layer cross. British Poultry Science, 46 4: 430-442. doi:10.1080/00071660500158055

  • Charlesworth, B, Keightley, P and Visscher, P (2005) Introduction: Population genetics, quantitative genetics and animal improvement: papers in honour of William (Bill) Hill. Philosophical Transactions of the Royal Society B-Biological Sciences, 360 1459: 1365-1366. doi:10.1098/rstb.2005.1678

  • Uimari, P, Kontkanen, O, Visscher, PM, Pirskanen, M, Fuentes, R and Salonen, JT (2005) Genome-wide linkage disequilibrium from 100,000 SNPs in the East Finland founder population. Twin Research and Human Genetics, 8 3: 185-197. doi:10.1375/1832427054253086

  • Wall, E, Visscher, PM, Hospital, F and Woolliams, JA (2005) Genomic contributions in livestock gene introgression programmes. Genetics Selection Evolution, 37 3: 291-313. doi:10.1051/gse:2005003

  • McRae, AF, Bishop, SC, Walling, GA, Wilson, AD and Visscher, PM (2005) Mapping of multiple quantitative trait loci for growth and carcass traits in a complex commercial sheep pedigree. Animal Science, 80 8: 135-141.

  • Tenesa, A, Visscher, PM, Carothers, AD and Knott, SA (2005) Mapping quantitative trait loci using linkage disequilibrium: Marker- versus trait-based methods. Behavior Genetics, 35 2: 219-228. doi:10.1007/s10519-004-0811-5

  • Montgomery, GW, Campbell, MJ, Dickson, P, Herbert, S, Siemering, K, Ewen-White, KR, Visscher, PM and Martin, NG (2005) Estimation of the rate of SNP genotyping errors from DNA extracted from different tissues. Twin Research and Human Genetics, 8 4: 346-352. doi:10.1375/1832427054936673

  • Macgregor, S, Visscher, PM, Knott, SA, Thomson, P, Porteous, DJ, Millar, JK, Devon, RS, Blackwood, D and Muir, WJ (2004) A genome scan and follow-up study identify a bipolar disorder susceptibility locus on chromosome 1q42. Molecular Psychiatry, 9 12: 1083-1090. doi:10.1038/sj.mp.4001544

  • Visscher, Peter M., Benyamin, Beben and White, Ian (2004) The use of linear mixed models to estimate variance components from data on twin pairs by maximum likelihood. Twin Research, 7 6: 670-674. doi:10.1375/1369052042663742

  • Visscher, PM (2004) Power of the classical twin design revisited. Twin Research, 7 5: 505-512. doi:10.1375/1369052042335250

  • Visscher, PM and Goddard, ME (2004) Prediction of the confidence interval of quantitative trait loci location. Behavior Genetics, 34 4: 477-482. doi:10.1023/B:BEGE.0000023652.93162.e8

  • Yu, XJ, Knott, SA and Visscher, PM (2004) Theoretical and empirical power of regression and maximum-likelihood methods to map quantitative trait loci in general pedigrees. American Journal of Human Genetics, 75 1: 17-26. doi:10.1086/421845

  • Deary, IJ, Whiteman, MC, Pattie, A, Starr, JM, Hayward, C, Wright, AF, Visscher, PM, Tynan, MC and Whalley, LJ (2004) Apolipoprotein E gene variability and cognitive functions at age 79: A follow-up of the Scottish Mental Survey of 1932. Psychology and Aging, 19 2: 367-371. doi:10.1037/0882-7974.19.2.367

  • Nsengimana, J, Baret, P, Haley, CS and Visscher, PM (2004) Linkage disequilibrium in the domesticated pig. Genetics, 166 3: 1395-1404. doi:10.1534/genetics.166.3.1395

  • Thomas, S, Porteous, D and Visscher, PM (2004) Power of direct vs. indirect haplotyping in association studies. Genetic Epidemiology, 26 2: 116-124. doi:10.1002/gepi.10300

  • Tenesa, A, Wright, AF, Knott, SA, Carothers, AD, Hayward, C, Angius, A, Persico, , Maestrale, G, Hastie, ND, Pirastu, M and Visscher, PM (2004) Extent of linkage disequilibrium in a Sardinian sub-isolate: sampling and methodological considerations. Human Molecular Genetics, 13 1: 25-33. doi:10.1093/hmg/ddh001

  • Nagamine, Y, Visscher, PM and Haley, CS (2004) QTL detection and allelic effects for growth and fat traits in outbred pig populations. Genetics Selection Evolution, 36 1: 83-96. doi:10.1051/gse:2003052

  • Schousboe, K, Visscher, PM, Erbas, B, Kyvik, KO, Hopper, JL, Henriksen, JE, Heitmann, BL and Sorensen, TIA (2004) Twin study of genetic and environmental influences on adult body size, shape, and composition. International Journal of Obesity, 28 1: 39-48. doi:10.1038/sj.ijo.0802524

  • Tenesa, A, Knott, SA, Carothers, AD and Visscher, PM (2003) Power of linkage disequilibrium mapping to detect a quantitative trait locus (QTL) in selected samples of unrelated individuals. Annals of Human Genetics, 67 557-566. doi:10.1046/j.1529-8817.2003.00058.x

  • Schousboe, K, Visscher, PM, Henriksen, JE, Hopper, JL, Sorensen, TIA and Kyvik, KO (2003) Twin study of genetic and environmental influences on glucose tolerance and indices of insulin sensitivity and secretion. Diabetologia, 46 9: 1276-1283. doi:10.1007/s00125-003-1165-x

  • Visscher, PM, Tynan, M, Whiteman, MC, Pattie, A, White, , Hayward, C, Wright, AF, Starr, JM, Whalley, LJ and Deary, IJ (2003) Lack of association between polymorphisms in angiotensin-converting-enzyme and methylenetetrahydrofolate reductase genes and normal cognitive ageing in humans. Neuroscience Letters, 347 3: 175-178. doi:10.1016/S0304-3940(03)00691-8

  • Hernandez-Sanchez, J, Visscher, P, Plastow, G and Haley, C (2003) Candidate gene analysis for quantitative traits using the transmission disequilibrium test: The example of the melanocortin 4-receptor in pigs. Genetics, 164 2: 637-644.

  • Visscher, PM and Le Hellard, S (2003) Simple method to analyze SNP-based association studies using DNA pools. Genetic Epidemiology, 24 4: 291-296. doi:10.1002/gepi.10240

  • Hayes, Ben J., Visscher, Peter M., McPartlan, Helen C. and Goddard, Mike E. (2003) Novel multilocus measure of linkage disequilibrium to estimate past effective population size. Genome Research, 13 4: 635-643. doi:10.1101/gr.387103

  • Argente, MJ, Blasco, A, Ortega, JA, Haley, CS and Visscher, PM (2003) Analyses for the presence of a major gene affecting uterine capacity in unilaterally ovariectomized rabbits. Genetics, 163 3: 1061-1068.

  • Tenesa, A, Knott, SA, Ward, D, Smith, D, Williams, JL and Visscher, PM (2003) Estimation of linkage disequilibrium in a sample of the United Kingdom dairy cattle population using unphased genotypes. Journal of Animal Science, 81 3: 617-623.

  • Porteous, DJ, Evans, KL, Millar, JK, Pickard, BS, Thomson, PA, James, R, MacGregor, S, Wray, NR, Visscher, PM, Muir, WJ and Blackwood, DH (2003) Genetics of schizophrenia and bipolar affective disorder: Strategies to identify candidate. Cold Spring Harbor Symposia On Quantitative Biology, 68 383-394. doi:10.1101/sqb.2003.68.383

  • Macgregor, S, Visscher, PM, Knott, S, Porteous, D, Muir, W, Millar, K and Blackwood, D (2002) Is schizophrenia linked to chromosome 1q?. Science, 298 5602: 2277-2277.

  • Slate, J, Visscher, PM, MacGregor, S, Stevens, D, Tate, ML and Pemberton, JM (2002) A genome scan for quantitative trait loci in a wild population of red deer (Cervus elaphus). Genetics, 162 4: 1863-1873.

  • Nagamine, Y, Knott, SA, Visscher, PM and Haley, CS (2002) Simple deterministic identity-by-descent coefficients and estimation of QTL allelic effects in full and half sibs. Genetical Research, 80 3: 237-243. doi:10.1017/S0016672302005918

  • Visscher, PM, Woolliams, JA, Smith, D and Williams, JL (2002) Estimation of pedigree errors in the UK dairy population using microsatellite markers and the impact on selection. Journal of Dairy Science, 85 9: 2368-2375. doi:10.3168/jds.S0022-0302(02)74317-8

  • Yazdi, MH, Visscher, PM, Ducrocq, and Thompson, R (2002) Heritability, reliability of genetic evaluations and response to selection in proportional hazard models. Journal of Dairy Science, 85 6: 1563-1577.

  • Walling, GA, Haley, CS, Perez-Enciso, M, Thompson, R and Visscher, PM (2002) On the mapping of quantitative trait loci at marker and non-marker locations. Genetical Research, 79 1: 97-106. doi:10.1017/S0016672301005420

  • Villanueva, B, Verspoor, E and Visscher, PM (2002) Parental assignment in fish using microsatellite genetic markers with finite numbers of parents and offspring. Animal Genetics, 33 1: 33-41. doi:10.1046/j.1365-2052.2002.00804.x

  • Seaton, G, Haley, CS, Knott, SA, Kearsey, M and Visscher, PM (2002) QTL Express: mapping quantitative trait loci in of simple and complex pedigrees. Bioinformatics, 18 2: 339-340. doi:10.1093/bioinformatics/18.2.339

  • Balding, DJ, Carothers, AD, Marchini, JL, Cardon, LR, Vetta, A, Griffiths, B, Weir, BS, Hill, WG, Goldstein, D, Strimmer, K, Myers, S, Beaumont, MA, Glasbey, CA, Mayer, CD, Richardson, S, Marshall, C, Durrett, R, Nielsen, R, Visscher, PM, Knott, SA, Haley, CS, Ball, RD, Hackett, CA, Holmes, S, Husmeier, D, Jansen, RC, ter Braak, CJF, Maliepaard, CA, Boer, MP, Joyce, P, Li, N, Stephens, M, Marcoulides, GA, Drezner, Z, Mardia, K, McVean, G, Meng, XL, Ochs, MF, Pagel, M, Sha, N, Vannucci, M, Sillanpaa, MJ, Sisson, S, Yandell, BS, Jin, CF, Satagopan, JM, Gaffney, PJ, Zeng, ZB, Broman, KW, Speed, TP, Fearnhead, P, Donnelly, P, Larget, B, Simon, DL, Kadane, JB, Nicholson, G, Smith, AV, Jonsson, F, Gustafsson, O, Stefansson, K, Donnelly, P, Parmigiani, G, Garrett, ES, Anbazhagan, R and Gabrielson, E (2002) Discussion on the meeting on 'Statistical modelling and analysis of genetic data'. Journal of the Royal Statistical Society Series B-Statistical Methodology, 64 737-775.

  • Visscher, PM and Hopper, JL (2001) Power of regression and maximum likelihood methods to map QTL from sib-pair and DZ twin data. Annals of Human Genetics, 65 583-601. doi:10.1046/j.1469-1809.2001.6560583.x

  • Visscher, PM, Yazdi, MH, Jackson, AD, Schalling, M, Lindblad, K, Yuan, QP, Porteous, D, Muir, WJ and Blackwood, DHR (2001) Genetic survival analysis of age-at-onset of bipolar disorder: evidence for anticipation or cohort effect in families. Psychiatric Genetics, 11 3: 129-137. doi:10.1097/00041444-200109000-00004

  • Visscher, P and Haley, C (2001) True and false positive peaks in genomewide scans: The long and the short of it. Genetic Epidemiology, 20 4: 409-414. doi:10.1002/gepi.1010

  • Roughsedge, T, Brotherstone, S and Visscher, PM (2001) Bias and power in the estimation of a maternal family variance component in the presence of incomplete and incorrect pedigree information. Journal of Dairy Science, 84 4: 944-950.

  • Visscher, PM, Smith, D, Hall, SJG and Williams, JA (2001) A viable herd of genetically uniform cattle - Deleterious alleles seem to have been purged in a feral strain of inbred cows.. Nature, 409 6818: 303-303. doi:10.1038/35053160

  • George, AW, Visscher, PM and Haley, CS (2000) Mapping quantitative trait loci in complex pedigrees: A two-step variance component approach. Genetics, 156 4: 2081-2092.

  • Roughsedge, T, Visscher, PM and Brotherstone, S (2000) Effects of cow families on production traits in dairy cattle. Animal Science, 71 49-57.

  • Walling, G. A., Visscher, P. M., Andersson, L., Rothschild, M. F., Wang, L. Z., Moser, G., Groenen, M. A. M., Bidanel, J. P., Cepica, S., Archibald, A. L., Geldermann, H., de Koning, D. J., Milan, D. and Haley, C. S. (2000) Combined analyses of data from quantitative trait loci mapping studies: Chromosome 4 effects on porcine growth and fatness. Genetics, 155 3: 1369-1378.

  • Lubbers, R, Brotherstone, S, Ducrocq, VP and Visscher, PM (2000) A comparison of a linear and proportional hazards approach to analyse discrete longevity data in dairy cows. Animal Science, 70 197-206.

  • Visscher, P, Whittaker, J and Jansen, R (2000) Mapping multiple QTL of different effects: comparison of a simple sequential testing strategy and multiple QTL mapping. Molecular Breeding, 6 1: 11-24. doi:10.1023/A:1009612308004

  • Slate, J, Pemberton, JM and Visscher, PM (1999) Power to detect QTL in a free-living polygynous population. Heredity, 83 327-336. doi:10.1038/sj.hdy.6885830

  • Visscher, PM (1999) Speed congenics: accelerated genome recovery using genetic markers. Genetical Research, 74 1: 81-85. doi:10.1017/S0016672399003857

  • Roughsedge, T, Brotherstone, S and Visscher, PM (1999) Quantifying genetic contributions to a dairy cattle population using pedigree analysis. Livestock Production Science, 60 2-3: 359-369. doi:10.1016/S0301-6226(99)00106-2

  • Visscher, PM, Haley, CS, Heath, SC, Muir, WJ and Blackwood, DHR (1999) Detecting QTLs for uni- and bipolar disorder using a variance component method. Psychiatric Genetics, 9 2: 75-84. doi:10.1097/00041444-199906000-00005

  • Roughsedge, T, Brotherstone, S and Visscher, PM (1999) Estimation of variance of maternal lineage effects at the Langhill dairy herd. Animal Science, 68 79-86.

  • Visscher, PM and Haley, CS (1999) On the efficiency of marker-assisted introgression. Animal Science, 68 59-68.

  • Walling, GA, Archibald, AL, Cattermole, JA, Downing, AC, Finlayson, HA, Nicholson, D, Visscher, PM, Walker, CA and Haley, CS (1998) Mapping of quantitative trait loci on porcine chromosome 4. Animal Genetics, 29 6: 415-424. doi:10.1046/j.1365-2052.1998.296360.x

  • Lebreton, CH, Visscher, PM, Haley, CS, Semikhodskii, A and Quarrie, SA (1998) A nonparametric bootstrap method for testing close linkage vs. pleiotrophy of coincident quantitative trait loci. Genetics, 150 2: 931-943.

  • de Koning, DJ, Visscher, PM, Knott, SA and Haley, CS (1998) A strategy for QTL detection in half-sib populations. Animal Science, 67 257-268.

  • Baret, PV, Knott, SA and Visscher, PM (1998) On the use of linear regression and maximum likelihood for QTL mapping in half-sib designs. Genetical Research, 72 2: 149-158. doi:10.1017/S0016672398003450

  • Visscher, PM and Haley, CS (1998) Power of a chromosomal test to detect genetic variation using genetic markers. Heredity, 81 317-326. doi:10.1046/j.1365-2540.1998.00398.x

  • Haley, CS and Visscher, PM (1998) Strategies to utilize marker-quantitative trait loci associations. Journal of Dairy Science, 81 85-97.

  • Visscher, PM (1998) On the sampling variance of intraclass correlations and genetic correlations. Genetics, 149 3: 1605-1614.

  • Walling, GA, Visscher, PM and Haley, CS (1998) A comparison of bootstrap methods to construct confidence intervals in QTL mapping. Genetical Research, 71 2: 171-180. doi:10.1017/S0016672398003164

  • Lebreton, CM and Visscher, PM (1998) Empirical nonparametric bootstrap strategies in quantitative trait loci mapping: Conditioning on the genetic model. Genetics, 148 1: 525-535.

  • vanHeelsum, AM, Visscher, PM and Haley, CS (1997) Marker-assisted introgression using non-unique marker alleles .1. Selection on the presence of linked marker alleles. Animal Genetics, 28 3: 181-187.

  • vanHeelsum, AM, Haley, CS and Visscher, PM (1997) Marker-assisted introgression using non-unique marker alleles .2. Selection on probability of presence of the introgressed allele. Animal Genetics, 28 3: 188-194.

  • Visscher, PM, Haley, CS and Thompson, R (1996) Marker-assisted introgression in backcross breeding programs. Genetics, 144 4: 1923-1932.

  • Visscher, PM and Haley, CS (1996) Detection of putative quantitative trait loci in line crosses under infinitesimal genetic models. Theoretical and Applied Genetics, 93 5-6: 691-702. doi:10.1007/BF00224064

  • Visscher, PM, Haley, CS and Knott, SA (1996) Mapping QTLs for binary traits in backcross and F-2 populations. Genetical Research, 68 1: 55-63.

  • Whittaker, JC, Thompson, R and Visscher, PM (1996) On the mapping of QTL by regression of phenotype on marker-type. Heredity, 77 23-32. doi:10.1038/hdy.1996.104

  • Visscher, PM, Thompson, R and Haley, CS (1996) Confidence intervals in QTL mapping by bootstrapping. Genetics, 143 2: 1013-1020.

  • Bowman, PJ, Visscher, PM and Goddard, ME (1996) Customized selection indices for dairy bulls in Australia. Animal Science, 62 393-403.

  • Visscher, PM (1996) Proportion of the variation in genetic composition in backcrossing programs explained by genetic markers. Journal of Heredity, 87 2: 136-138.

  • Visscher, PM and Thompson, R (1995) Haplotype frequencies of linked loci in backcross populations derived from inbred lines. Heredity, 75 644-649. doi:10.1038/hdy.1995.184

  • VISSCHER, PM and GODDARD, ME (1995) GENETIC ANALYSES OF PROFIT FOR AUSTRALIAN DAIRY-CATTLE. Animal Science, 61 9-18.

  • VISSCHER, PM and GODDARD, ME (1995) GENETIC-PARAMETERS FOR MILK-YIELD, SURVIVAL WORKABILITY, AND TYPE TRAITS FOR AUSTRALIAN DAIRY-CATTLE. Journal of Dairy Science, 78 1: 205-220. doi:10.3168/jds.S0022-0302(95)76630-9

  • VISSCHER, PM, BOWMAN, PJ and GODDARD, ME (1994) BREEDING OBJECTIVES FOR PASTURE BASED DAIRY PRODUCTION SYSTEMS. Livestock Production Science, 40 2: 123-137. doi:10.1016/0301-6226(94)90042-6

  • VISSCHER, PM and THOMPSON, R (1992) COMPARISONS BETWEEN GENETIC VARIANCES ESTIMATED FROM DIFFERENT TYPES OF RELATIVES IN DAIRY-CATTLE. Animal Production, 55 315-320.

  • VISSCHER, PM and HILL, WG (1992) HETEROGENEITY OF VARIANCE AND DAIRY-CATTLE BREEDING. Animal Production, 55 321-329.

  • VISSCHER, PM (1992) POWER OF LIKELIHOOD RATIO TESTS FOR HETEROGENEITY OF INTRACLASS CORRELATION AND VARIANCE IN BALANCED HALF-SIB DESIGNS. Journal of Dairy Science, 75 5: 1320-1330. doi:10.3168/jds.S0022-0302(92)77883-7

  • VISSCHER, PM, THOMPSON, R and HILL, WG (1991) ESTIMATION OF GENETIC AND ENVIRONMENTAL VARIANCES FOR FAT YIELD IN INDIVIDUAL HERDS AND AN INVESTIGATION INTO HETEROGENEITY OF VARIANCE BETWEEN HERDS. Livestock Production Science, 28 4: 273-290. doi:10.1016/0301-6226(91)90010-N

  • VISSCHER, PM (1991) ON THE ESTIMATION OF VARIANCES WITHIN HERD-MEAN PRODUCTION GROUPS. Journal of Dairy Science, 74 6: 1987-1992.

Conference Publication

  • Posthuma, Danielle, Benyamin, Beben, de Leeuw, Christiaan, Sullivan, Patrick, van Bochoven, Arjen, Polderman, Tinca and Visscher, Peter (2017). Fifty Years of Twin Studies On Psychiatric Traits Show That for the Majority of Traits Genetic Variation Is Mostly Additive. In: 23rd Annual World Congress of Psychiatric Genetics (WCPG), Toronto Canada, (S285-S285). Oct 16-20, 2015.

  • Maier, Robert, Robinson, Matt, Wray, Naomi and Visscher, Peter (2016). Multivariate Genetic Risk Scores Can Increase Risk Prediction Accuracy for a wide Range of Traits. In: Annual Meeting of the International-Genetic-Epidemiology-Society, Toronto Canada, (651-651). 24-26 October 2016.

  • Beauchamp, Jonathan, Turley, Patrick, Fontana, Mark, Okbay, Aysu, Lee, James, Rietveld, Cornelius, de Vlaming, Ronald, Visscher, Peter, Esko, Tonu, Koellinger, Philipp, Cesarini, David and Benjamin, Daniel (2015). Pleiotropy with educational attainment: results based on a GWAS with 300,000 individuals. In: 45th Annual Meeting of the Behavior-Genetics-Association, San Diego, CA, United States, (643-643). 20 June 2015.

  • Rietveld, Cornelius, Koellinger, Philipp, Benjamin, Daniel, Cesarini, David, Davey-Smith, George, Davies, Gail, Deary, Ian, Johannesson, Magnus, Plomin, Robert, Posthuma, D. and Visscher, Peter (2013). Are SNPs associated with educational attainment also associated with cognitive function?. In: Behavior Genetics Association 43rd Annual Meeting Abstracts. 43rd Annual Meeting of the Behavior-Genetics-Association, Marseille France, (538-538). 28 June-02 July 2013. doi:10.1007/s10519-013-9623-9

  • Okada, Yukinori, Wu, Di, Terao, Chikashi, Ikari, Katsunori, Kochi, Yuta, Ohmura, Koichiro, Suzuki, Akari, Yamanaka, Hisashi, Denny, Joshua C., Greenberg, Jeffrey D., Graham, Robert R., Brown, Matthew A., Bae, Sang-Cheol, Worthington, Jane, Padyukov, Leonid, Klareskog, Lars, Gregersen, Peter K., Visscher, Peter M., Siminovitch, Katherine A. and Plenge, Robert M. (2013). Biological Insights From Genetics Of Rheumatoid Arthritis Contribute To Drug Discovery. In: Abstract Supplement 2013 Annual Meeting. 77th Annual Meeting of the American College of Rheumatology / 48th Annual Meeting of the Association of Rheumatology Health Professionals, San Diego CA, United States, (S723-S724). 25-30 October 2013. doi:10.1002/art.38216

  • Ebejer, Jane, Medland, Sarah, Martin, Nick G., Wright, Margaret, Montgomery, Grant, Powell, Joseph, Visscher, Peter and Duffy, David (2013). Clarification of varying genetic expression and structure within adolescent monozygotic and dizygotic twins discordant for high and low attention and activity. In: Behavior Genetics Association 43rd Annual Meeting Abstracts. 43rd Annual Meeting of the Behavior-Genetics-Association, Marseille France, (515-516). 28 June-02 July 2013. doi:10.1007/s10519-013-9623-9

  • Justice, Anne, North, Kari, Loos, Ruth, Vedantam, Sailaja, Day, Felix, Berndt, Sonja, Gustafsson, Stefan, Locke, Adam, Powell, Corey, Bratati, Kahali, Croteau-Chonka, Damien, Winkler, Thomas, Scherag, Andre, Barroso, Ines, Beckmann, Jacqui, Lindgren, Cecilia, Pers, Tune, Visscher, Peter, Willer, Cristen, Yang, Jian, Mohlke, Karen, Hirschorn, Joel, Ingelsson, Erik, Boehnke, Michael and Speliotes, Elizabeth (2013). Meta-analysis of Genetic Associations in up to 339,224 Individuals Identify 66 New Loci for Bmi, Confirming a Neuronal Contribution to Body Weight Regulation and Implicating Several Novel Pathways. In: Abstracts From the American Heart Association's Epidemiology and Prevention/Physical Activity, Nutrition and Metabolism 2013 Scientific Sessions. Scientific Sessions of the American-Heart-Association on Epidemiology and Prevention/Physical Activity, Nutrition and Metabolism, New Orleans La, (). 19 - 22 March 2013.

  • de Candia, Teresa, Lee, Hong, Yang, Jian, Browning, Brian, Gejman, Pablo, Levinson, Douglas, Hewitt, John, Visscher, Peter, Wray, Naomi and Keller, Matthew (2012). Additive genetic variation in risk to schizophrenia across African American and European American populations. In: Behavior Genetics. 42nd Annual Meeting of the Behavior-Genetics-Association, Edinburgh Scotland, (928-928). Jun 22-25, 2012.

  • Benjamin, Daniel, Cesarini, David, van der Loos, Matthijs, Dawes, Chris, Koellinger, Philipp, Magnusson, Patrik, Chabris, Chris, Conley, Dalton, Laibson, David, Johannesson, Magnus and Visscher, Peter (2012). The genetic architecture of economic and political preferences. In: Behavior Genetics Association 42nd Annual Meeting Abstracts. 42nd Annual Meeting of the Behavior Genetics Association, Edinburgh Scotland, (919-920). 22-25 June 2012.

  • Visscher, Peter M. (2009). Whole genome approaches to quantitative genetics. In: 3rd International Conference of Quantitative Genetics, Hangzhou Peoples R China, (351-358). Aug 18-24, 2007. doi:10.1007/s10709-008-9301-7

  • Benyamin, Beben, Deary, Ian J. and Visscher, Peter M. (2006). Precision and bias of a mixture distribution model to analyse twin data when zygosity is unknown: Simulations and application to IQ phenotypes on a large sample of twin pairs. In: Behavior Genetics. 36th Annual Meeting of the Behavior-Genetics-Association, Storrs, CT, United States, (955-955). 24 June 2006.

  • Kyvik, KO, Benyamin, B, Schousboe, K, Fenger, M, Sorensen, TIA and Visscher, P (2005). Multivariate genetic analyses of phenotypes related to the metabolic syndrome. In: Diabetologia. 41st Annual Meeting of the European-Association-for-the-Study-of-Diabetes, Athens Greece, (A139-A139). Sep 10-15, 2005.

  • Visscher, P, Pong-Wong, R, Whittemore, C and Haley, C (2000). Impact of biotechnology on (cross)breeding programmes in pigs. In: 49th EAAP Meeting, Warsaw Poland, (57-70). Aug, 1998. doi:10.1016/S0301-6226(99)00180-3

  • Visscher, PM, Mackinnon, M and Haley, CS (1997). Efficiency of marker assisted selection. In: Allerton II Conference on Genetic Analysis of Economically Important Traits in Livestock, Monticello Il, (99-106). Nov 06-09, 1996.

Grants (Administered at UQ)

PhD and MPhil Supervision

Current Supervision

  • Doctor Philosophy — Principal Advisor

    Other advisors:

  • Doctor Philosophy — Principal Advisor

  • Doctor Philosophy — Principal Advisor

    Other advisors:

  • Doctor Philosophy — Associate Advisor

    Other advisors:

  • Doctor Philosophy — Associate Advisor

    Other advisors:

  • Doctor Philosophy — Associate Advisor

  • Doctor Philosophy — Associate Advisor

    Other advisors:

Completed Supervision

Possible Research Projects

Note for students: The possible research projects listed on this page may not be comprehensive or up to date. Always feel free to contact the staff for more information, and also with your own research ideas.

  • We have several PhD projects are available in our research group. The projects are about quantitative genetic methods and application to large datasets to answer fundamental questions about the genetic basis of quantitative traits and disease in human populations. There are many traits that we study, including gene expression, gene methylation, height and body-mass-index, psychiatric disease and neurogenetic conditions.