The University of Queensland

Do root exudates exert more influence on rhizosphere bacterial community structure than other rhizodeposits?

Hirsch, Penny R., Miller, Anthony J. and Dennis, Paul G. (2013). Do root exudates exert more influence on rhizosphere bacterial community structure than other rhizodeposits?. Molecular Microbial Ecology of the Rhizosphere. (pp. 229-242) edited by Frans J. de Bruijn. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1002/9781118297674.ch22

Rhizosphere Metatranscriptomics: Challenges and Opportunities

Carvalhais, Lilia C., Dennis, Paul G., Tyson, Gene W. and Schenk, Peer M. (2013). Rhizosphere Metatranscriptomics: Challenges and Opportunities. Molecular Microbial Ecology of the Rhizosphere. (pp. 1137-1144) edited by Frans J. de Bruijn. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1002/9781118297674.ch109

14C pulse labelling and allocation imaging

Dennis, Paul and Jones, Davey (2006). 14C pulse labelling and allocation imaging. Handbook of methods used in rhizosphere research. (pp. 336-337) edited by Günter Neumann. Birmensdorf, Switzerland: Swiss Federal Research Institute WSL.

Non-destructive micro-scale sampling of bacteria from a root surface using a tungsten rod with a standardised sampling area controlled by a micromanipulator

Dennis, Paul, Miller, Anthony and Hirsch, Penny (2006). Non-destructive micro-scale sampling of bacteria from a root surface using a tungsten rod with a standardised sampling area controlled by a micromanipulator. Handbook of methods used in rhizosphere research. (pp. 384-385) edited by Peter Schweiger and Roger Finlay. Birmensdorf, Switzerland: Swiss Federal Research Institute WSL.

Visualisation of rhizosphere bacterial colonisation patterns

Dennis, Paul, Miller, Anthony and Hirsch, Penny (2006). Visualisation of rhizosphere bacterial colonisation patterns. Handbook of methods used in rhizosphere research. (pp. 386-387) edited by Peter Schweiger and Roger Finlay. Birmensdorf, Switzerland: Swiss Federal Research Institute WSL.

Effects of grazing and fire management on rangeland soil and biocrust microbiomes

Vega-Cofre, Maria V., Williams, Wendy, Song, Young, Schmidt, Susanne and Dennis, Paul G. (2023). Effects of grazing and fire management on rangeland soil and biocrust microbiomes. Ecological Indicators, 148 110094, 1-8. doi: 10.1016/j.ecolind.2023.110094

Maternal diet modulates the infant microbiome and intestinal Flt3L necessary for dendritic cell development and immunity to respiratory infection

Sikder, Md. Al Amin, Rashid, Ridwan B., Ahmed, Tufael, Sebina, Ismail, Howard, Daniel R., Ullah, Md. Ashik, Rahman, Muhammed Mahfuzur, Lynch, Jason P., Curren, Bodie, Werder, Rhiannon B., Simpson, Jennifer, Bissell, Alec, Morrison, Mark, Walpole, Carina, Radford, Kristen J., Kumar, Vinod, Woodruff, Trent M., Ying, Tan Hui, Ali, Ayesha, Kaiko, Gerard E., Upham, John W., Hoelzle, Robert D., Cuív, Páraic Ó., Holt, Patrick G., Dennis, Paul G. and Phipps, Simon (2023). Maternal diet modulates the infant microbiome and intestinal Flt3L necessary for dendritic cell development and immunity to respiratory infection. Immunity, 56 (5), 1098-1114.e10. doi: 10.1016/j.immuni.2023.03.002

Soil carbon, nitrogen, and biotic properties after long-term no-till and nitrogen fertilization in a subtropical Vertisol

Zhang, Yaqi, Bhattacharyya, Ranjan, Finn, Damien, Birt, Henry W.G., Dennis, Paul G., Dalal, Ram C., Jones, Andrew R., Meyer, Gregor, Dayananda, Buddhi, Wang, Peng, Menzies, Neal W. and Kopittke, Peter M. (2023). Soil carbon, nitrogen, and biotic properties after long-term no-till and nitrogen fertilization in a subtropical Vertisol. Soil and Tillage Research, 227 105614, 1-11. doi: 10.1016/j.still.2022.105614

The Effects of Atrazine, Diuron, Fluazifop-P-butyl, Haloxyfop-P-methyl, and Pendimethalin on Soil Microbial Activity and Diversity

Dennis, Paul G., Kukulies, Tegan, Forstner, Christian, Plisson, Fabien, Eaglesham, Geoff and Pattison, Anthony B. (2023). The Effects of Atrazine, Diuron, Fluazifop-P-butyl, Haloxyfop-P-methyl, and Pendimethalin on Soil Microbial Activity and Diversity. Applied Microbiology, 3 (1), 79-89. doi: 10.3390/applmicrobiol3010007

Probiotic Bifidobacterium longum subsp. longum protects against cigarette smoke-induced inflammation in mice

Budden, Kurtis F., Gellatly, Shaan L., Vaughan, Annalicia, Amorim, Nadia, Horvat, Jay C., Hansbro, Nicole G., Wood, David L. A., Hugenholtz, Philip, Dennis, Paul G., Wark, Peter A. B. and Hansbro, Philip M. (2022). Probiotic Bifidobacterium longum subsp. longum protects against cigarette smoke-induced inflammation in mice. International Journal of Molecular Sciences, 24 (1) 252, 1-12. doi: 10.3390/ijms24010252

Effect of Toxic Phthalate-Based Plasticizer on the Biodegradability of Polyhydroxyalkanoate

Chan, Clement Matthew, Lyons, Rebecca, Dennis, Paul G., Lant, Paul, Pratt, Steven and Laycock, Bronwyn (2022). Effect of Toxic Phthalate-Based Plasticizer on the Biodegradability of Polyhydroxyalkanoate. Environmental Science & Technology, 56 (24), 17732-17742. doi: 10.1021/acs.est.2c06583

The core bacterial microbiome of banana (Musa spp.)

Birt, Henry W. G., Pattison, Anthony B., Skarshewski, Adam, Daniells, Jeff, Raghavendra, Anil and Dennis, Paul G. (2022). The core bacterial microbiome of banana (Musa spp.). Environmental Microbiomes, 17 (1) 46. doi: 10.1186/s40793-022-00442-0

Draft genome sequences of Dickeya species associated with soft rot diseases in pineapple (Ananas comosus) and banana (Musa spp.)

Young, Anthony J., Birt, Henry W. G., Vaghefi, Niloofar, Hoelzle, Robert D. and Dennis, Paul G. (2022). Draft genome sequences of Dickeya species associated with soft rot diseases in pineapple (Ananas comosus) and banana (Musa spp.). Microbiology Resource Announcements, 11 (11), e0071622. doi: 10.1128/mra.00716-22

Draft genome sequences of Robbsia andropogonis isolated from Sorghum bicolor exhibiting bacterial leaf stripe in Australia

Young, Anthony J., Birt, Henry W. G., Hoelzle, Robert D. and Dennis, Paul G. (2022). Draft genome sequences of Robbsia andropogonis isolated from Sorghum bicolor exhibiting bacterial leaf stripe in Australia. Microbiology Resource Announcements, 11 (10) e0024722, e0024722. doi: 10.1128/mra.00247-22

Nitrogen fertilizer rate but not form affects the severity of Fusarium wilt in banana

Orr, Ryan, Dennis, Paul G., Wong, Yide, Browne, Daniel J., Cooper, Martha, Birt, Henry W. G., Lapis-Gaza, Hazel R., Pattison, Anthony B. and Nelson, Paul N. (2022). Nitrogen fertilizer rate but not form affects the severity of Fusarium wilt in banana. Frontiers in Plant Science, 13 907819. doi: 10.3389/fpls.2022.907819

Cropping system diversification influences soil microbial diversity in subtropical dryland farming systems

Williams, Alwyn, Birt, Henry W. G., Raghavendra, Anil and Dennis, Paul G. (2022). Cropping system diversification influences soil microbial diversity in subtropical dryland farming systems. Microbial Ecology, 85 (4), 1-12. doi: 10.1007/s00248-022-02074-w

Manipulating exudate composition from root apices shapes the microbiome throughout the root system

Kawasaki, Akitomo, Dennis, Paul G., Forstner, Christian, Raghavendra, Anil K.H., Mathesius, Ulrike, Richardson, Alan E., Delhaize, Emmanuel, Gilliham, Matthew, Watt, Michelle and Ryan, Peter R. (2021). Manipulating exudate composition from root apices shapes the microbiome throughout the root system. Plant Physiology, 187 (4), 2279-2295. doi: 10.1093/plphys/kiab337

Simple solution to preserve plant samples for microbiome analyses

Carvalhais, Lilia C., Dennis, Paul G., Poudel, Amrit, Birt, Henry W. G., Bhuiyan, Shamsul A., Card, Stuart D. and Joyce, Priya A. (2021). Simple solution to preserve plant samples for microbiome analyses. Molecular Ecology Resources, 22 (3), 1055-1064. doi: 10.1111/1755-0998.13538

Plant-produced bacteriocins inhibit plant pathogens and confer disease resistance in tomato

Mirzaee, Hooman, Neira Peralta, Noelia L., Carvalhais, Lilia C., Dennis, Paul G. and Schenk, Peer M. (2021). Plant-produced bacteriocins inhibit plant pathogens and confer disease resistance in tomato. New Biotechnology, 63, 54-61. doi: 10.1016/j.nbt.2021.03.003

Soil organic carbon is significantly associated with the pore geometry, microbial diversity and enzyme activity of the macro-aggregates under different land uses

Bhattacharyya, Ranjan, Rabbi, Sheikh M.F., Zhang, Yaqi, Young, Iain M., Jones, Andrew R., Dennis, Paul G., Menzies, Neal W., Kopittke, Peter M. and Dalal, Ram C. (2021). Soil organic carbon is significantly associated with the pore geometry, microbial diversity and enzyme activity of the macro-aggregates under different land uses. Science of the Total Environment, 778 146286, 1-10. doi: 10.1016/j.scitotenv.2021.146286

Long-term changes in land use influence phosphorus concentrations, speciation, and cycling within subtropical soils

Zhang, Yaqi, Finn, Damien, Bhattacharyya, Ranjan, Dennis, Paul G., Doolette, Ashlea L., Smernik, Ronald J., Dalal, Ram C., Meyer, Gregor, Lombi, Enzo, Klysubun, Wantana, Jones, Andrew R., Wang, Peng, Menzies, Neal W. and Kopittke, Peter M. (2021). Long-term changes in land use influence phosphorus concentrations, speciation, and cycling within subtropical soils. Geoderma, 393 115010, 1-13. doi: 10.1016/j.geoderma.2021.115010

The microbiomes on the roots of wheat (Triticum aestivum L.) and rice (Oryza sativa L.) exhibit significant differences in structure between root types and along root axes

Kawasaki, Akitomo, Dennis, Paul G., Forstner, Christian, Raghavendra, Anil K. H., Richardson, Alan E., Watt, Michelle, Mathesius, Ulrike, Gilliham, Matthew and Ryan, Peter R. (2021). The microbiomes on the roots of wheat (Triticum aestivum L.) and rice (Oryza sativa L.) exhibit significant differences in structure between root types and along root axes. Functional Plant Biology, 48 (9), 871-888. doi: 10.1071/FP20351

Drivers of bacterial diversity along a natural transect from freshwater to saline subtropical wetlands

Chuvochina, Maria, Adame, Maria Fernanda, Guyot, Adrien, Lovelock, Catherine, Lockington, David, Gamboa-Cutz, Julieta N. and Dennis, Paul G. (2021). Drivers of bacterial diversity along a natural transect from freshwater to saline subtropical wetlands. Science of the Total Environment, 759 143455, 1-8. doi: 10.1016/j.scitotenv.2020.143455

Regional diversity of maritime Antarctic soil fungi and predicted responses of guilds and growth forms to climate change

Newsham, Kevin K., Davey, Marie L., Hopkins, David W. and Dennis, Paul G. (2021). Regional diversity of maritime Antarctic soil fungi and predicted responses of guilds and growth forms to climate change. Frontiers in Microbiology, 11 615659. doi: 10.3389/fmicb.2020.615659

Preface

Carvalhais, Lilia C. and Dennis, Paul G. (2021). Preface. Methods in Molecular Biology, 2232, v-vi. doi: 10.4337/9781784714802.00005

Wastewater treatment processing of silver nanoparticles strongly influences their effects on soil microbial diversity

Forstner, Christian, Orton, Thomas G., Wang, Peng, Kopittke, Peter M. and Dennis, Paul G. (2020). Wastewater treatment processing of silver nanoparticles strongly influences their effects on soil microbial diversity. Environmental Science and Technology, 54 (21) acs.est.0c01312, 13538-13547. doi: 10.1021/acs.est.0c01312

Significant effects on soil microbial communities were not detected after strategic tillage following 44 years of conventional or no-tillage management

Rincon-Florez, Vivian A., Carvalhais, Lilia C., Dang, Yash P., Crawford, Mark H., Schenk, Peer M. and Dennis, Paul G. (2020). Significant effects on soil microbial communities were not detected after strategic tillage following 44 years of conventional or no-tillage management. Pedobiologia, 80 150640, 150640. doi: 10.1016/j.pedobi.2020.150640

Lean and keen: microbial activity in soils from the Maritime Antarctic

Hopkins, David W., Dennis, Paul G., Rushton, Steven P., Newsham, Kevin K. and O'Donnell, Tony G. (2020). Lean and keen: microbial activity in soils from the Maritime Antarctic. European Journal of Soil Science, 72 (1), 413-431. doi: 10.1111/ejss.12957

Successional dynamics of soil fungal diversity along a restoration chronosequence post-coal mining

Ngugi, Michael R., Fechner, Nigel, Neldner, Victor J. and Dennis, Paul G. (2019). Successional dynamics of soil fungal diversity along a restoration chronosequence post-coal mining. Restoration Ecology, 28 (3) rec.13112, 543-552. doi: 10.1111/rec.13112

Full-scale investigation of in-situ iron and alkalinity generation for efficient sulfide control

Pikaar, Ilje, Flugen, Markus, Lin, Hui-Wen, Salehin, Sirajus, Li, Jiuling, Donose, Bogdan C., Dennis, Paul G., Bethke, Lisa, Johnson, Ian, Rabaey, Korneel and Yuan, Zhiguo (2019). Full-scale investigation of in-situ iron and alkalinity generation for efficient sulfide control. Water Research, 167 115032, 115032. doi: 10.1016/j.watres.2019.115032

Soil chloride content influences the response of bacterial but not fungal diversity to silver nanoparticles entering soil via wastewater treatment processing

Forstner, Christian, Orton, Thomas G., Wang, Peng, Kopittke, Peter M. and Dennis, Paul G. (2019). Soil chloride content influences the response of bacterial but not fungal diversity to silver nanoparticles entering soil via wastewater treatment processing. Environmental Pollution, 255 (Pt 2) 113274, 113274. doi: 10.1016/j.envpol.2019.113274

Effects of commercial microbial biostimulants on soil and root microbial communities and sugarcane yield

Berg, Shelby, Dennis, Paul G., Paungfoo-Lonhienne, Chanyarat, Anderson, Jay, Robinson, Nicole, Brackin, Richard, Royle, Adam, DiBella, Lawrence and Schmidt, Susanne (2019). Effects of commercial microbial biostimulants on soil and root microbial communities and sugarcane yield. Biology and Fertility of Soils, 56 (4), 565-580. doi: 10.1007/s00374-019-01412-4

Effects of carbon nanotubes and derivatives of graphene oxide on soil bacterial diversity

Forstner, Christian, Orton, Thomas G., Wang, Peng, Kopittke, Peter M. and Dennis, Paul G. (2019). Effects of carbon nanotubes and derivatives of graphene oxide on soil bacterial diversity. Science of the Total Environment, 682, 356-363. doi: 10.1016/j.scitotenv.2019.05.162

Effects of graphene oxide and graphite on soil bacterial and fungal diversity

Forstner, Christian, Orton, Thomas G., Skarshewski, Adam, Wang, Peng, Kopittke, Peter M. and Dennis, Paul G. (2019). Effects of graphene oxide and graphite on soil bacterial and fungal diversity. Science of the Total Environment, 671, 140-148. doi: 10.1016/j.scitotenv.2019.03.360

Technologies for the selection, culture and metabolic profiling of unique rhizosphere microorganisms for natural product discovery

Gurusinghe, Saliya, Brooks, Tabin L., Barrow, Russell A., Zhu, Xiaocheng, Thotagamuwa, Agasthya, Dennis, Paul G., Gupta, Vadakattu V. S. R., Vanniasinkam, Thiru and Weston, Leslie A. (2019). Technologies for the selection, culture and metabolic profiling of unique rhizosphere microorganisms for natural product discovery. Molecules, 24 (10) 1955, 1955. doi: 10.3390/molecules24101955

Soil amendments with ethylene precursor alleviate negative impacts of salinity on soil microbial properties and productivity

Liu, Hongwei, Khan, Muhammad Yahya, Carvalhais, Lilia C., Delgado-Baquerizo, Manuel, Yan, Lijuan, Crawford, Mark, Dennis, Paul G., Singh, Brajesh and Schenk, Peer M. (2019). Soil amendments with ethylene precursor alleviate negative impacts of salinity on soil microbial properties and productivity. Scientific Reports, 9 (1) 6892, 6892. doi: 10.1038/s41598-019-43305-4

The ability of plants to produce strigolactones affects rhizosphere community composition of fungi but not bacteria

Carvalhais, Lilia C., Rincon-Florez, Vivian A., Brewer, Philip B., Beveridge, Christine A., Dennis, Paul G. and Schenk, Peer M. (2019). The ability of plants to produce strigolactones affects rhizosphere community composition of fungi but not bacteria. Rhizosphere, 9, 18-26. doi: 10.1016/j.rhisph.2018.10.002

Soil bacterial diversity is positively associated with air temperature in the maritime Antarctic

Dennis, Paul G., Newsham, Kevin K., Rushton, Steven P., O’Donnell, Anthony G. and Hopkins, David W. (2019). Soil bacterial diversity is positively associated with air temperature in the maritime Antarctic. Scientific Reports, 9 (1) 2686, 2686. doi: 10.1038/s41598-019-39521-7

Open-cut mining impacts on soil abiotic and bacterial community properties as shown by restoration chronosequence

Ngugi, Michael R., Dennis, Paul G., Neldner, Victor J., Doley, David, Fechner, Nigel and McElnea, Angus (2018). Open-cut mining impacts on soil abiotic and bacterial community properties as shown by restoration chronosequence. Restoration Ecology, 26 (5), 839-850. doi: 10.1111/rec.12631

Activation of the salicylic acid signalling pathway in wheat had no significant short-term impact on the diversity of root-associated microbiomes

Liu, Hongwei, Carvalhais, Lilia C., Schenk, Peer M. and Dennis, Paul G. (2018). Activation of the salicylic acid signalling pathway in wheat had no significant short-term impact on the diversity of root-associated microbiomes. Pedobiologia, 70, 6-11. doi: 10.1016/j.pedobi.2018.08.001

Ecological drivers of soil microbial diversity and soil biological networks in the Southern Hemisphere

Delgado-Baquerizo, Manuel, Reith, Frank, Dennis, Paul G., Hamonts, Kelly, Powell, Jeff R., Young, Andrew, Singh, Brajesh K. and Bissett, Andrew (2018). Ecological drivers of soil microbial diversity and soil biological networks in the Southern Hemisphere. Ecology, 99 (3), 583-596. doi: 10.1002/ecy.2137

The effects of glyphosate, glufosinate, paraquat and paraquat-diquat on soil microbial activity and bacterial, archaeal and nematode diversity

Dennis, Paul G., Kukulies, Tegan, Forstner, Christian, Orton, Thomas G. and Pattison, Anthony B (2018). The effects of glyphosate, glufosinate, paraquat and paraquat-diquat on soil microbial activity and bacterial, archaeal and nematode diversity. Scientific Reports, 8 (1) 2119, 2119. doi: 10.1038/s41598-018-20589-6

Plasmacytoid dendritic cells protect from viral bronchiolitis and asthma through semaphorin 4a-mediated T reg expansion

Lynch, Jason P., Werder, Rhiannon B., Loh, Zhixuan, Sikder, Md Al Amin, Curren, Bodie, Zhang, Vivian, Rogers, Matthew J. , Lane, Katie, Simpson, Jennifer, Mazzone, Stuart B., Spann, Kirsten, Hayball, John, Diener, Kerrilyn, Everard, Mark L., Blyth, Christopher C., Forstner, Christian, Dennis, Paul G., Murtaza, Nida, Morrison, Mark, Ó Cuív, Páraic, Zhang, Ping, Haque, Ashraful, Hill, Geoffrey R., Sly, Peter D., Upham, John W. and Phipps, Simon (2017). Plasmacytoid dendritic cells protect from viral bronchiolitis and asthma through semaphorin 4a-mediated T reg expansion. The Journal of Experimental Medicine, 215 (2), 537-557. doi: 10.1084/jem.20170298

Inner plant values: Diversity, colonization and benefits from endophytic bacteria

Liu, Hongwei, Carvalhais, Lilia C., Crawford, Mark, Singh, Eugenie, Dennis, Paul G., Pieterse, Corné M.J. and Schenk, Peer M. (2017). Inner plant values: Diversity, colonization and benefits from endophytic bacteria. Frontiers in Microbiology, 8 (DEC) 2552, 2552. doi: 10.3389/fmicb.2017.02552

Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence

Yeoh, Yun Kit, Dennis, Paul G., Paungfoo-Lonhienne, Chanyarat, Weber, Lui, Brackin, Richard, Ragan, Mark A., Schmidt, Susanne and Hugenholtz, Philip (2017). Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence. Nature Communications, 8 (1) 002628, 215. doi: 10.1038/s41467-017-00262-8

Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion

Shiffman, Miriam E, Soo, Rochelle M, Dennis, Paul G, Morrison, Mark, Tyson, Gene W and Hugenholtz, Philip (2017). Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion. PeerJ, 5, 1-32. doi: 10.7717/peerj.4075

Jasmonic acid signalling and the plant holobiont

Carvalhais, Lilia C., Schenk, Peer M. and Dennis, Paul G. (2017). Jasmonic acid signalling and the plant holobiont. Current Opinion in Microbiology, 37, 42-47. doi: 10.1016/j.mib.2017.03.009

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database (vol 5, 1, 2016)

Bissett, Andrew, Fitzgerald, Anna, Court, Leon, Meintjes, Thys, Mele, Pauline M., Reith, Frank, Dennis, Paul G., Breed, Martin F., Brown, Belinda, Brown, Mark V., Brugger, Joel, Byrne, Margaret, Caddy-Retalic, Stefan, Carmody, Bernie, Coates, David J., Correa, Carolina, Ferrari, Belinda C., Gupta, Vadakattu V. S. R., Hamonts, Kelly, Haslem, Asha, Hugenholtz, Philip, Karan, Mirko, Koval, Jason, Lowe, Andrew J., Macdonald, Stuart, McGrath, Leanne, Martin, David, Morgan, Matt, North, Kristin I. ... Young, Andrew (2017). Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database (vol 5, 1, 2016). Gigascience, 6 (5) gix021, 1-1. doi: 10.1093/gigascience/gix021

Microbial energy and matter transformation in agricultural soils

Finn, Damien, Kopittke, Peter M., Dennis, Paul G. and Dalal, Ram C. (2017). Microbial energy and matter transformation in agricultural soils. Soil Biology and Biochemistry, 111, 176-192. doi: 10.1016/j.soilbio.2017.04.010

Cross-comparison of human wastewater-associated molecular markers in relation to fecal indicator bacteria and enteric viruses in recreational beach waters

Hughes, B., Beale, D. J., Dennis, P. G., Cook, S. and Ahmed, W. (2017). Cross-comparison of human wastewater-associated molecular markers in relation to fecal indicator bacteria and enteric viruses in recreational beach waters. Applied and Environmental Microbiology, 83 (8) e00028-17. doi: 10.1128/AEM.00028-17

The nanostructure of microbially-reduced graphene oxide fosters thick and highly-performing electrochemically-active biofilms

Virdis, Bernardino and Dennis, Paul G. (2017). The nanostructure of microbially-reduced graphene oxide fosters thick and highly-performing electrochemically-active biofilms. Journal of Power Sources, 356, 556-565. doi: 10.1016/j.jpowsour.2017.02.086

The influence of the microbiome on early-life severe viral lower respiratory infections and asthma-food for thought?

Lynch, Jason P., Sikder, Al Amin, Curren, Bodie F., Werder, Rhiannon B., Simpson, Jennifer, Cuiv, Paraic O., Dennis, Paul G., Everard, Mark L. and Phipps, Simon (2017). The influence of the microbiome on early-life severe viral lower respiratory infections and asthma-food for thought?. Frontiers in Immunology, 8 (FEB) 156, 156. doi: 10.3389/fimmu.2017.00156

Effects of jasmonic acid signalling on the wheat microbiome differ between body sites

Liu, Hongwei, Carvalhais, Lilia C., Schenk, Peer M. and Dennis, Paul G. (2017). Effects of jasmonic acid signalling on the wheat microbiome differ between body sites. Scientific Reports, 7 (1) srep41766, 41766. doi: 10.1038/srep41766

Circular linkages between soil biodiversity, fertility and plant productivity are limited to topsoil at the continental scale

Delgado-Baquerizo, Manuel, Powell, Jeff R., Hamonts, Kelly, Reith, Frank, Mele, Pauline, Brown, Mark V., Dennis, Paul G., Ferrari, Belinda C., Fitzgerald, Anna, Young, Andrew, Singh, Brajesh K. and Bissett, Andrew (2017). Circular linkages between soil biodiversity, fertility and plant productivity are limited to topsoil at the continental scale. New Phytologist, 215 (3), 1186-1196. doi: 10.1111/nph.14634

Anode potential influences the structure and function of anodic electrode and electrolyte-associated microbiomes

Dennis, Paul G., Virdis, Bernardino, Vanwonterghem, Inka, Hassan, Alif, Hugenholtz, Phil, Tyson, Gene W. and Rabaey, Korneel (2016). Anode potential influences the structure and function of anodic electrode and electrolyte-associated microbiomes. Scientific Reports, 6 (1) 39114, 39114. doi: 10.1038/srep39114

Strategic tillage increased the relative abundance of Acidobacteria but did not impact on overall soil microbial properties of a 19-year no-till Solonetz

Liu, Hongwei, Carvalhais, Lilia C., Crawford, Mark, Dang, Yash P., Dennis, Paul G. and Schenk, Peer M. (2016). Strategic tillage increased the relative abundance of Acidobacteria but did not impact on overall soil microbial properties of a 19-year no-till Solonetz. Biology and Fertility of Soils, 52 (7), 1021-1035. doi: 10.1007/s00374-016-1138-0

Silver nanoparticles entering soils via the wastewater-sludge-soil pathway pose low risk to plants but elevated Cl concentrations increase Ag bioavailability

Wang, Peng, Menzies, Neal W., Dennis, Paul G., Guo, Jianhua, Forstner, Christian, Sekine, Ryo, Lombi, Enzo, Kappen, Peter, Bertsch, Paul M. and Kopittke, Peter M. (2016). Silver nanoparticles entering soils via the wastewater-sludge-soil pathway pose low risk to plants but elevated Cl concentrations increase Ag bioavailability. Environmental Science and Technology, 50 (15), 8274-8281. doi: 10.1021/acs.est.6b01180

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database

Bissett, Andrew, Fitzgerald, Anna, Meintjes, Thys, Mele, Pauline M., Reith, Frank, Dennis, Paul G., Breed, Martin F., Brown, Belinda, Brown, Mark V., Brugger, Joel, Byrne, Margaret, Caddy-Retalic, Stefan, Carmody, Bernie, Coates, David J., Correa, Carolina, Ferrari, Belinda C., Gupta, Vadakattu V. S. R., Hamonts, Kelly, Haslem, Asha, Hugenholtz, Philip, Karan, Mirko, Koval, Jason, Lowe, Andrew J., Macdonald, Stuart, McGrath, Leanne, Martin, David, Morgan, Matt, North, Kristin I., Paungfoo-Lonhienne, Chanyarat ... Young, Andrew (2016). Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database. Gigascience, 5 (1) 21, 21.1-21.11. doi: 10.1186/s13742-016-0126-5

Comment on "graphene oxide regulates the bacterial community and exhibits property changes in soil" by J. Du, X. Hu and Q. Zhou,: RSC Advances, 2015, 5, 27009

Forstner, Christian, Wang, Peng, Kopittke, Peter M. and Dennis, Paul G. (2016). Comment on "graphene oxide regulates the bacterial community and exhibits property changes in soil" by J. Du, X. Hu and Q. Zhou,: RSC Advances, 2015, 5, 27009. RSC Advances, 6 (56), 51203-51204. doi: 10.1039/c5ra26329h

One-time strategic tillage does not cause major impacts on soil microbial properties in a no-till Calcisol

Liu, Hongwei, Carvalhais, Lilia C., Rincon-Florez, Vivian, Crawford, Mark, Dang, Yash P., Dennis, Paul G. and Schenk, Peer M. (2016). One-time strategic tillage does not cause major impacts on soil microbial properties in a no-till Calcisol. Soil and Tillage Research, 158, 91-99. doi: 10.1016/j.still.2015.12.007

Strategic tillage on a Grey Vertosol after fifteen years of no-till management had no short-term impact on soil properties and agronomic productivity

Liu, Hongwei, Crawford, Mark, Carvalhais, Lilia C., Dang, Yash P., Dennis, Paul G. and Schenk, Peer M. (2016). Strategic tillage on a Grey Vertosol after fifteen years of no-till management had no short-term impact on soil properties and agronomic productivity. Geoderma, 267, 146-155. doi: 10.1016/j.geoderma.2016.01.002

Gelifluction and thixotropy of maritime Antarctic soils: small-scale measurements with a rotational rheometer

Sun, Benhua, Dennis, Paul G., Newsham, Kevin K., Hopkins, David W. and Hallett, Paul D. (2016). Gelifluction and thixotropy of maritime Antarctic soils: small-scale measurements with a rotational rheometer. Permafrost and Periglacial Processes, 28 (1), 314-321. doi: 10.1002/ppp.1886

Relationship between soil fungal diversity and temperature in the maritime Antarctic

Newsham, Kevin K., Hopkins, David W., Carvalhais, Lilia C., Fretwell, Peter T., Rushton, Steven P., O'Donnell, Anthony G. and Dennis, Paul G. (2016). Relationship between soil fungal diversity and temperature in the maritime Antarctic. Nature Climate Change, 6 (2), 182-186. doi: 10.1038/nclimate2806

Linking jasmonic acid signaling, root exudates, and rhizosphere microbiomes

Carvalhais, Lilia C., Dennis, Paul G., Badri, Dayakar V., Kidd, Brendan N., Vivanco, Jorge M. and Schenk, Peer M. (2015). Linking jasmonic acid signaling, root exudates, and rhizosphere microbiomes. Molecular Plant-Microbe Interactions, 28 (9), 1049-1058. doi: 10.1094/MPMI-01-15-0016-R

The core root microbiome of sugarcanes cultivated under varying nitrogen fertiliser application.

Yeoh, Yun Kit, Paungfoo-Lonhienne, Chanyarat, Dennis, Paul G., Robinson, Nicole, Ragan, Mark A., Schmidt, Susanne and Hugenholtz, Philip (2015). The core root microbiome of sugarcanes cultivated under varying nitrogen fertiliser application.. Environmental Microbiology, 18 (5), 1338-1351. doi: 10.1111/1462-2920.12925

Development of bioelectrocatalytic activity stimulates mixed-culture reduction of glycerol in a bioelectrochemical system

Zhou, Mi, Freguia, Stefano, Dennis, Paul G., Keller, Jürg and Korneel Rabaey (2015). Development of bioelectrocatalytic activity stimulates mixed-culture reduction of glycerol in a bioelectrochemical system. Microbial Biotechnology, 8 (3), 483-489. doi: 10.1111/1751-7915.12240

Responses to increases in temperature of heterotrophic micro-organisms in soils from the maritime Antarctic

Laudicina, Vito Armando, Benhua, Sun, Dennis, Paul G, Badalucco, Luigi, Rushton, Steven P, Newsham, Kevin K, O'Donnell, Anthony G, Hartley, Iain P and Hopkins, David W (2015). Responses to increases in temperature of heterotrophic micro-organisms in soils from the maritime Antarctic. Polar Biology, 38 (8), 1153-1160. doi: 10.1007/s00300-015-1673-4

Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix

Pantos, Olga, Bongaerts, Pim, Dennis, Paul G., Tyson, Gene W. and Hoegh-Guldberg, OVe (2015). Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix. The ISME Journal, 9 (9), 1916-1927. doi: 10.1038/ismej.2015.3

Plant defence inducers rapidly influence the diversity of bacterial communities in a potting mix

Carvalhais, Lilia C., Dennis, Paul G. and Schenk, Peer M. (2014). Plant defence inducers rapidly influence the diversity of bacterial communities in a potting mix. Applied Soil Ecology, 84, 1-5. doi: 10.1016/j.apsoil.2014.06.011

Biogeochemical responses to nutrient, moisture and temperature manipulations of soil from Signy Island, South Orkney Islands in the Maritime Antarctic

Sun, Benhua, Dennis, P. G., Laudicina, V. A., Ord, V. J., Rushton, S. P., O'Donnell, A. G., Newsham, K. K. and Hopkins, D. W. (2014). Biogeochemical responses to nutrient, moisture and temperature manipulations of soil from Signy Island, South Orkney Islands in the Maritime Antarctic. Antarctic Science, 26 (5), 513-520. doi: 10.1017/S0954102014000030

GroopM: an automated tool for the recovery of population genomes from related metagenomes

Imelfort, Michael, Parks, Donovan, Woodcroft, Ben J., Dennis, Paul, Hugenholtz, Philip and Tyson, Gene W. (2014). GroopM: an automated tool for the recovery of population genomes from related metagenomes. PeerJ, 2014 (1) e603, 1-16. doi: 10.7717/peerj.603

Deterministic processes guide long-term synchronised population dynamics in replicate anaerobic digesters

Vanwonterghem, Inka, Jensen, Paul D., Dennis, Paul G., Hugenholtz, Philip, Rabaey, Korneel and Tyson, Gene W. (2014). Deterministic processes guide long-term synchronised population dynamics in replicate anaerobic digesters. ISME Journal, Advance Online (10), 1-14. doi: 10.1038/ismej.2014.50

An expanded genomic representation of the phylum Cyanobacteria

Soo, Rochelle M., Skennerton, Connor T., Sekiguchi, Yuji, Imelfort, Michael, Paech, Samuel J., Dennis, Paul G., Steen, Jason A., Parks, Donovan H., Tyson, Gene W. and Hugenholtz, Philip (2014). An expanded genomic representation of the phylum Cyanobacteria. Genome Biology and Evolution, Advance Access (5), 1-42. doi: 10.1093/gbe/evu073

CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction

Angly, Florent E., Dennis, Paul G., Skarshewski, Adam, Vanwonterghem, Inka, Hugenholtz, Philip and Tyson, Gene W. (2014). CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction. Microbiome, 2 (11) 11, 11. doi: 10.1186/2049-2618-2-11

Microbial ecology and biogeochemistry of continental Antarctic soils

Cowan, Don A., Makhalanyane, Thulani P., Dennis, Paul G. and Hopkins, David W. (2014). Microbial ecology and biogeochemistry of continental Antarctic soils. Frontiers in Microbiology, 5 (APR) 154, 154. doi: 10.3389/fmicb.2014.00154

Microbial properties and nitrogen contents of arable soils under different tillage regimes

Sun, B., Roberts, D. M., Dennis, P. G., Caul, S., Daniell, T. J., Hallett, P. D. and Hopkins, D. W. (2014). Microbial properties and nitrogen contents of arable soils under different tillage regimes. Soil Use and Management, 30 (1), 152-159. doi: 10.1111/sum.12089

Drivers of microbial community composition in mesophilic and thermophilic temperature-phased anaerobic digestion pre-treatment reactors

Pervin, Hasina M., Dennis, Paul G., Lim, Hui J., Tyson, Gene W., Batstone, Damien J. and Bond, Philip L. (2013). Drivers of microbial community composition in mesophilic and thermophilic temperature-phased anaerobic digestion pre-treatment reactors. Water Research, 47 (19), 7098-7108. doi: 10.1016/j.watres.2013.07.053

Erratum to Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency [J. Plant Nutr. Soil Sci 174 (2011) 311]

Carvalhais, Lilia C., Dennis, Paul G., Fedoseyenko, Dmitri, Hajirezaei, Mohammad-Reza, Borriss, Rainer and von Wirén, Nicolaus (2013). Erratum to Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency [J. Plant Nutr. Soil Sci 174 (2011) 311]. Journal of Plant Nutrition and Soil Science, 176 (4), 641-641. doi: 10.1002/jpln.201390025

Coral reef invertebrate microbiomes correlate with the presence of photosymbionts

Bourne, David G, Dennis, Paul G., Uthicke, Sven, Soo, Rochelle M., Tyson, Gene W. and Webster, Nicole (2013). Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. Isme Journal, 7 (7), 1459-1459. doi: 10.1038/ismej.2013.71

Coral reef invertebrate microbiomes correlate with the presence of photosymbionts

Bourne, David G., Dennis, Paul G., Uthicke, Sven, Soo, Rochelle M., Tyson, Gene W. and Webster, Nicole (2013). Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. Isme Journal, 7 (7), 1452-1458. doi: 10.1038/ismej.2012.172

Dynamics of cathode-associated microbial communities and metabolite profiles in a glycerol-fed bioelectrochemical system

Dennis, Paul G., Harnisch, Falk, Yeoh, Yun Kit, Tyson, Gene W. and Rabaey, Korneel (2013). Dynamics of cathode-associated microbial communities and metabolite profiles in a glycerol-fed bioelectrochemical system. Applied and Environmental Microbiology, 79 (13), 4008-4014. doi: 10.1128/AEM.00569-13

Effects of surface charge and hydrophobicity on anodic biofilm formation, community composition, and current generation in bioelectrochemical systems

Guo, Kun, Freguia, Stefano, Dennis, Paul G., Chen, Xin, Donose, Bogdan C., Keller, Jurg, Gooding, J. Justin and Rabaey, Korneel (2013). Effects of surface charge and hydrophobicity on anodic biofilm formation, community composition, and current generation in bioelectrochemical systems. Environmental Science and Technology, 47 (13), 7563-7570. doi: 10.1021/es400901u

Linking plant nutritional status to plant-microbe interactions

Carvalhais, Lilia C., Dennis, Paul G., Fan, Ben, Fedoseyenko, Dmitri, Kierul, Kinga, Becker, Anke, von Wiren, Nicolaus and Borriss, Rainer (2013). Linking plant nutritional status to plant-microbe interactions. PLoS One, 8 (7) e68555, e68555.1-e68555.13. doi: 10.1371/journal.pone.0068555

Diverse populations of lake water bacteria exhibit chemotaxis towards inorganic nutrients

Dennis, Paul G., Seymour, Justin, Kumbun, Kimber and Tyson, Gene W. (2013). Diverse populations of lake water bacteria exhibit chemotaxis towards inorganic nutrients. ISME Journal, 7 (8), 1661-1664. doi: 10.1038/ismej.2013.47

Activation of the jasmonic acid plant defence pathway alters the composition of rhizosphere bacterial communities

Carvalhais, Lilia C., Dennis, Paul G., Badri, Dayakar V., Tyson, Gene W., Vivanco, Jorge M. and Schenk, Peer M. (2013). Activation of the jasmonic acid plant defence pathway alters the composition of rhizosphere bacterial communities. PLoS ONE, 8 (2) e56457, e56457. doi: 10.1371/journal.pone.0056457

Microbial responses to carbon and nitrogen supplementation in an Antarctic dry valley soil

Dennis, P. G., Sparrow, A. D., Gregorich, E. G., Novis, P. M., Elberling, B., Greenfield, L. G. and Hopkins, D. W. (2013). Microbial responses to carbon and nitrogen supplementation in an Antarctic dry valley soil. Antarctic Science, 25 (1), 55-61. doi: 10.1017/S0954102012000855

Warming constrains bacterial community responses to nutrient inputs in a southern, but not northern, maritime Antarctic soil

Dennis, Paul G., Newsham, Kevin K., Rushton, Steven P., Ord, Victoria J., O'Donnell, Anthony G. and Hopkins, David W. (2013). Warming constrains bacterial community responses to nutrient inputs in a southern, but not northern, maritime Antarctic soil. Soil Biology and Biochemistry, 57, 248-255. doi: 10.1016/j.soilbio.2012.07.009

Spatial uniformity of microbial diversity in a continuous bioelectrochemical system

Dennis, Paul G., Guo, Kun, Imelfort, Michael, Jensen, Paul, Tyson, Gene W. and Rabaey, Korneel (2012). Spatial uniformity of microbial diversity in a continuous bioelectrochemical system. Bioresource Technology, 129 (10), 599-605. doi: 10.1016/j.biortech.2012.11.098

Application of metatranscriptomics to soil environments

Carvalhais, Lilia C., Dennis, Paul G., Tyson, Gene W. and Schenk, Peer M. (2012). Application of metatranscriptomics to soil environments. Journal of Microbiological Methods, 91 (2), 246-251. doi: 10.1016/j.mimet.2012.08.011

High-throughput amplicon sequencing reveals distinct communities within a corroding concrete sewer system

Cayford, Barry I., Dennis, Paul G., Keller, Jurg, Tyson, Gene W. and Bond, Philip L. (2012). High-throughput amplicon sequencing reveals distinct communities within a corroding concrete sewer system. Applied and Environmental Microbiology, 78 (19), 7160-7162. doi: 10.1128/AEM.01582-12

Soil fungal community composition does not alter along a latitudinal gradient through the maritime and sub-Antarctic

Dennis, Paul G., Rushton, Steven P., Newsham, Kevin K., Lauducina, Vito A., Ord, Victoria J., Daniell, Timothy J., O'Donnell, Anthony G. and Hopkins, David W. (2012). Soil fungal community composition does not alter along a latitudinal gradient through the maritime and sub-Antarctic. Fungal Ecology, 5 (4), 403-408. doi: 10.1016/j.funeco.2011.12.002

Key Biochemical Attributes to Assess Soil Ecosystem Sustainability

Laudicina, Vito Armando, Dennis, Paul C., Palazzolo, Eristanna and Badalucco, Luigi (2012). Key Biochemical Attributes to Assess Soil Ecosystem Sustainability. Environmental Protection Strategies for Sustainable Development, 193-227. doi: 10.1007/978-94-007-1591-2_6

Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency

Carvalhais, Lilia C., Dennis, Paul G., Fedoseyenko, Dmitri, Hajirezaei, Mohammad-Reza, Borriss, Rainer and von Wiren, Nicolaus (2011). Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency. Journal of Plant Nutrition and Soil Science, 174 (1), 3-11. doi: 10.1002/jpln.201000085

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

Dennis P.G., Miller A.J. and Hirsch P.R. (2010). Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?. FEMS Microbiology Ecology, 72 (3), 313-327. doi: 10.1111/j.1574-6941.2010.00860.x

Isotopic evidence for the provenance and turnover of organic carbon by soil microorganisms in the Antarctic dry valleys

Hopkins, D.W., Sparrow, A.D., Gregorich, E.G., Elberling, B., Novis, P., Fraser, F., Scrimgeour, C., Dennis, P.G., Meier-Augenstein, W. and Greenfield, L.G. (2009). Isotopic evidence for the provenance and turnover of organic carbon by soil microorganisms in the Antarctic dry valleys. Environmental Microbiology, 11 (3), 597-608. doi: 10.1111/j.1462-2920.2008.01830.x

Linking rhizoplane pH and bacterial density at the microhabitat scale

Dennis, Paul G., Hirsch, Penny R., Smith, Susan J., Taylor, Richard G., Valsami-Jones, Eugenia and Miller, Anthony J. (2009). Linking rhizoplane pH and bacterial density at the microhabitat scale. Journal of Microbiological Methods, 76 (1), 101-104. doi: 10.1016/j.mimet.2008.09.013

A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale

Dennis, Paul G., Miller, Anthony J., Clark, Ian M., Taylor, Richard G., Valsami-Jones, Eugenia and Hirsch, Penny R. (2008). A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale. Journal of Microbiological Methods, 75 (1), 12-18. doi: 10.1016/j.mimet.2008.04.013

Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation

Hopkins, D.W., Sparrow, A.D., Shillam, L.L., English, L.C., Dennis, P.G., Novis, P., Elberling, B., Gregorich, E.G. and Greenfield, L.G. (2008). Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation. Soil Biology and Biochemistry, 40 (9), 2130-2136. doi: 10.1016/j.soilbio.2008.03.022

Field evaluation of in situ remediation of a heavy metal contaminated soil using lime and red-mud

Gray. C. W., Dunham. S. J., Dennis. P. G., Zhao. F. J. and McGrath. S. P. (2006). Field evaluation of in situ remediation of a heavy metal contaminated soil using lime and red-mud. Environmental Pollution, 142 (3), 530-539. doi: 10.1016/j.envpol.2005.10.017

Organic acid behavior in soils - Misconceptions and knowledge gaps

Jones D.L., Dennis P.G., Owen A.G. and Van Hees P.A.W. (2003). Organic acid behavior in soils - Misconceptions and knowledge gaps. Plant and Soil, 248 (1-2), 31-41. doi: 10.1023/A:1022304332313

Association between dietary fibre, microbial metabolites and airway obstruction in COPD patients and murine models

Budden, K., Rehman, S. F., Shukla, S., Bowerman, K., Donovan, C., Gomez, H., Alemao, C., Wood, L., Dennis, P., Hugenholtz, P., Wark, P. and Hansbro, P. (2022). Association between dietary fibre, microbial metabolites and airway obstruction in COPD patients and murine models. ERS International Congress 2022, Barcelona, Spain, 4-6 September 2022. Sheffield, United Kingdom: European Respiratory Society. doi: 10.1183/13993003.congress-2022.3289

Diet influences COPD pathogenesis by regulating microbial metabolism

Budden, K., Rehman, Firdous S., Shukla, S., Bowerman, K., Donovan, C., Gomez, H., Sahu, P., Alemao, C., Holmes, A., Dennis, P., Hugenholtz, P., Wark, P. and Hansbro, P. (2020). Diet influences COPD pathogenesis by regulating microbial metabolism. TSANZSRS 2020 The Australia & New Zealand Society of Respiratory Science and The Thoracic Society of Australia and New Zealand (ANZSRS/TSANZ) Annual Scientific Meeting for Leaders in Lung Health & Respiratory Science, Melbourne, VIC Australia, 27–31 March 2020. Richmond, VIC Australia: Wiley-Blackwell.

Dietary fibre elevates SCFAS and protects against experimental COPD

Budden, K., Shukla, S., Rehman, Firdous S., Donvan, C., Bowerman, K., Dennis, P., Hugenholtz, P. and Hansbro, P. (2019). Dietary fibre elevates SCFAS and protects against experimental COPD. TSANZSRS 2019 The Australia & New Zealand Society of Respiratory Science and The Thoracic Society of Australia and New Zealand (ANZSRS/TSANZ) Annual Scientific Meeting, Gold Coast, QLD, Australia, 29 March–2 April 2019. Richmond, VIC, Australia : Wiley-Blackwell Publishing Asia. doi: 10.1111/resp.13492

The Role of the Gastrointestinal Microbiome in Lung Cancer Pathogenesis

Budden, Kurtis, Shukla, Shakti, Rehman, Saima Firdous, Sahu, Priyanka, Donovan, Chantal, Bowerman, Kate L., Dennis, Paul G., Hugenholtz, Philip and Hansbro, Philip M. (2019). The Role of the Gastrointestinal Microbiome in Lung Cancer Pathogenesis. 2019 Hunter Cancer Research Symposium, Newcastle, NSW Australia, 8 November 2019. Chichester, West Sussex United Kingdom: Wiley-Blackwell.

Identification of disease suppressive banana plant and soil microbiomes

Dennis, P., Birt, H., Raghavendra, A., Waugh, G., Wang, H., Aitken, E., Gervacio, T., Orr, R., Nelson, P., Daniells, J. and Pattison, T. (2018). Identification of disease suppressive banana plant and soil microbiomes. International Congress of Plant Pathology (ICPP), Boston MA, United States, July 29 - August 3 2018. Saint Paul, MN, United States: American Phytopathological Society.

Manipulation of the soil microbial community to suppress soil-borne diseases of banana through soil management

Pattison, T., McBeath, A., East, D., Birt, H. and Dennis, P. (2018). Manipulation of the soil microbial community to suppress soil-borne diseases of banana through soil management. International Congress of Plant Pathology (ICPP), Boston MA, United States, July 29 - August 3 2018. Saint Paul, MN, United States: American Phytopathological Society.

Dietary fibre and microbial metabolites protect against cigarette smoke-induced lung pathology in mice

Budden, Kurtis, Gellatly, Shaan, Wood, David, Morrison, Mark, Cooper, Matthew, Dennis, Paul G., Hugenholtz, Philip and Hansbro, Philip (2017). Dietary fibre and microbial metabolites protect against cigarette smoke-induced lung pathology in mice. 22nd Congress of the Asian Pacific Society of Respirology, Sydney, Australia, 23–26 November 2017. Hoboken, NJ United States: Wiley.

Healthy gut microbiota ameliorates experimental chronic obstructive pulmonary disease

Gellatly, S., Dennis, P., Jarnicki, A., Lachner, N., Wood, D., Fricker, M., Budden, K., Liu, G., Keely, S., Morrison, M., Willner, D., Cooper, M., Hugenholtz, P. and Hansbro, P. (2016). Healthy gut microbiota ameliorates experimental chronic obstructive pulmonary disease. Annual Scientific Meeting of the Thoracic Society of Australia and New Zealand and the Australian and New Zealand Society of Respiratory Science 2014, Perth, WA, Australia, 1–6 April 2016. Hoboken, NJ United States: Wiley. doi: 10.1111/resp.12754_22

Semaphorin 4A-Dependent Treg Cell Expansion by Plasmacytoid Dc Confers Protection Against Severe Viral Bronchiolitis and Subsequent Asthma

Lynch, J. P., Werder, R., Rogers, M., Lane, K., Loh, Z., Diener, K., Colonna, M., Forstner, C., Dennis, P., Hayball, J., Hill, G., Haque, A., Spann, K., Mazzone, S., Uphaem, J. and Phipps, S. (2016). Semaphorin 4A-Dependent Treg Cell Expansion by Plasmacytoid Dc Confers Protection Against Severe Viral Bronchiolitis and Subsequent Asthma. 4th Annual Meeting of The International Cytokine and Interferon Society (ICIS), San Francisco, United States, 16-19 October 2016. London, United Kingdom: Academic Press. doi: 10.1016/j.cyto.2016.07.021

Microbial community composition and function associated with enhanced anaerobic digestion of organic biosolids.

Pervin, H.P., Hastie, M., Dennis, P.G., Jensen, P., Gorman, J., Tyson, G.W., Batstone, D. and Bond, P.L. (2013). Microbial community composition and function associated with enhanced anaerobic digestion of organic biosolids.. 2nd Water Research Conference, Singapore EXPO, Singapore, 20-23 January, 2013.

Microbial community dynamics correlate to reactor parameters and performance in a pre-treatment stage of temperature–phased anaerobic digestion.

Pervin, H.P., Dennis, P.G., Lim, H.J., Tyson, G.W., Batstone, D. and Bond, P.L. (2013). Microbial community dynamics correlate to reactor parameters and performance in a pre-treatment stage of temperature–phased anaerobic digestion.. 2nd Water Research Conference, Singapore International Convention and Exhibition Centre, 20-23 January 2013.

Determining ecosystem community and function important for enhanced anaerobic digestion of organic biosolids

Pervin, H. P., Hastie, M., Dennis, P. G., Gorman, J., Tyson, G. W., Batstone, D. and Bond, P. L. (2012). Determining ecosystem community and function important for enhanced anaerobic digestion of organic biosolids. Australian Society for Microbiology Annual Scientific Meeting (ASM2012), Brisbane, Australia, 1-4 July 2012.

Microbial communities involved in the corrosion of concrete sewer infrastructure

Cayford, Barry I., Dennis, Paul G., Tyson, Gene W. and Bond, Philip L. (2012). Microbial communities involved in the corrosion of concrete sewer infrastructure. 14th International Symposium on Microbial Ecology (ISME14), Copenhagan, Denmark, 19-24 August 2012.

Microbial corrosion of concrete sewer pipes

Cayford, B. I., Tyson, G. W., Dennis, P. G., Keller, J. and Bond, P .L. (2012). Microbial corrosion of concrete sewer pipes. Australian Society for Microbiology Annual Scientific Meeting (ASM2012), Brisbane, Australia, 1-4 July 2012.

How do rhizosphere bacteria interact with their environment at the microhabitat scale?

Dennis, Paul (2007). How do rhizosphere bacteria interact with their environment at the microhabitat scale?. PhD Thesis, -, University College London.