Dr Andrew Janke

Senior Research Fellow

Centre for Advanced Imaging
andrew.janke@uq.edu.au
+61 7 336 53392

Overview

Qualifications

  • Doctor of Philosophy, The University of Queensland
  • Bachelor of Science (Honours), The University of Queensland

Publications

View all Publications

Supervision

  • Doctor Philosophy

  • (2015) Doctor Philosophy

  • Doctor Philosophy

View all Supervision

Publications

Book Chapter

  • Ullmann, Jeremy F.P. and Janke, Andrew L. (2017). Neuroimaging phenotypes in zebrafish. In The Rights and Wrongs of Zebrafish: Behavioral Phenotyping of Zebrafish (pp. 273-289) Cham, Switzerland: Springer International Publishing. doi:10.1007/978-3-319-33774-6_13

Journal Article

Conference Publication

  • Janke, Andrew and Kingston-Ducrot, Sandrine (2018). Slides for a 2018 ANDS webinar entitled "Research Data Storage and sharing: a UQ journey". In: Kingston-Ducrot, Sandrine, ANDS webinar. ANDS Webinar, Brisbane, (). 9 June 2018. doi:10.14264/uql.2018.393

  • J. Munk, N. Jacobsen, M. Plocharski, L. R. Østergaard, M. Barth, A. Janke and S. Bollmann (2017). Contrast Matching of Ultra-High Resolution Minimum Deformation Averaged MRI Models to Facilitate Computation of a Multi-Modal Model of the Human Brain. In: Proc. Intl. Soc. Mag. Reson. Med.. ISMRM, Honolulu, (). 22-27 April 2017.

  • Bollmann, Steffen, Andrew Janke and Markus Barth (2017). Deep Mapping: Using deep convolutional neural networks to estimate quantitative T1 maps trained on a 7 T minimum deformation average model. In: Proc. Intl. Soc. Mag. Reson. Med. 25. ISMRM, Honolulu, (). 22-27 April 2017.

  • Saskia Bollmann, Steffen Bollmann, Alex Puckett, Andrew Janke and Markus Barth (2017). Non-Linear Realignment Using Minimum Deformation Averaging for Single-Subject FMRI at Ultra-High Field. In: Proc. Intl. Soc. Mag. Reson. Med. 25. ISMRM, Honolulu, (). 22-27 April 2017.

  • Cowin, Gary, Leong, Lilly, Mardon, Karine, Janke, Andrew, Vegh, Viktor and Brereton, Ian (2015). Simultaneous MRI-PET bladder imaging of 18F-FDG and Gd-Magnevist. In: Australian Society for Molecular Imaging, Melbourne, Australia, (). December 2015.

  • Nguyen, Hoang Anh, Abramson, David, Kiporous, Timoleon, Janke, Andrew and Galloway, Graham (2015). WorkWays: Interacting with scientific workflows. In: Proceedings of GCE 2014: 9th Gateway Computing Environments Workshop, held in conjunction with SC 2014: The International Conference for High Performance Computing, Networking, Storage and Analysis. 9th Gateway Computing Environments Workshop, GCE 2014, New Orleans, LA, USA, (21-24). November 21, 2014. doi:10.1109/GCE.2014.6

  • Roy, Pallab Kanti, Bhuiyan, Alauddin, Janke, Andrew, Desmond, Patricia M., Wong, Tien Yin, Storey, Elsdon, Abhayaratna, Walter P. and Ramamohanarao, Kotagiri (2014). Automated segmentation of white matter lesions using global neighbourhood given contrast feature-based random forest and markov random field. In: Proceedings - 2014 IEEE International Conference on Healthcare Informatics, ICHI 2014. 2014 2nd IEEE International Conference on Healthcare Informatics, ICHI 2014, Verona, Italy, (). 15 - 17 September 2014. doi:10.1109/ICHI.2014.75

  • Ward, Stephanie, Storey, Elsdon, Hamilton, Garun, Naughton, Matthew, O'Donoghue, Fergal, Kawasaki, Ryo, Janke, Andrew, Wong, Tien and Woods, Robyn (2014). The study of neurocognitive outcomes, radiological and retinal effects of aspirin in sleep apnoea - 'SNORE-ASA' - Study rationale, design and methods. In: Australian and New Zealand Society for Geriatric Medicine Annual Scientific Meeting, Melbourne, Australia, (66-67). 28–30 May 2014. doi:10.1111/ajag.12179

  • Nguyen, Hien D., McLachlan, Geoffrey J., Janke, Andrew L., Cherbuin, Nicolas, Sachdev, Perminder and Anstey, Kaarin J. (2013). Spatial false discovery rate control for magnetic resonance imaging studies. In: Digital Image Computing: Techniques and Applications (DICTA), 2013 International Conference on. International Conference on Digital Image Computing: Techniques and Applications, DICTA 2013, Hobart, TAS, (290-297). 26 - 28 November 2013. doi:10.1109/DICTA.2013.6691531

  • Mortby, M., Janke, A. L., Sachdev, P., Anstey, K. J. and Cherbuin, N. (2012). Increased depressive symptoms are associated with larger gray and white matter regional volume. In: Charting new frontiers in aging. Abstracts of the Gerontological Society of America 65th Annual Scientific Meeting. 65th Annual Scientific Meeting “Charting New Frontiers in Aging”, San Diego, CA, United States, (319-319). 14-18 November 2012.

  • Ullmann, J. F. P., Janke, A. L., Watson, C., Kurniawan, N. D., Paxinos, G., Keller, M, Yang, Z., Richards, K., Egan, G., Petrou, S., Galloway, G. and Reutens, D. (2012). Probabilistic atlas of the C57BL/6J mouse cerebellum. In: ISMRM 20th Annual Meeting & Exhibition: Adapting MR in a Changing World. 20th Annual Meeting of the International Society for Magnetic Resonance in Medicine, Melbourme, VIC, Australia, (). 5-11 May 2012.

  • Maddess, Teddy, Ali, Eman, James, Andrew, Voicu, Cristian, Janke, Andrew and Lueck, Christian (2012). The application of pupillary response to sparse multifocal stimuli in monitoring multiple sclerosis patients. In: Neurology. 64th Annual Meeting of the American-Academy-of-Neurology (AAN), New Orleans, LA, United States, (P01.157.1-P01.157.2). 21-28 April 2012.

  • Fonov, Vladimir S., Janke, Andrew, Caramanos, Zografos, Arnold, Douglas L., Narayanan, Sridar, Pike, G. Bruce and Collins, D. Louis (2010). Improved Precision in the Measurement of Longitudinal Global and Regional Volumetric Changes via a Novel MRI Gradient Distortion Characterization and Correction Technique. In: Medical Imaging and Augmented Reality. 5th International Workshop on Medical Imaging and Augmented Reality, Beijing Peoples R China, (324-+). Sep 19-20, 2010.

  • A. Janke, A. Rodell and M. Budge (2009). ANDI – The Australian normative and dementia imaging collaborative network: Software tools for large databases. In: 2009 Alzheimer's Association's International Conference on Alzheimer's Disease (ICAD 2009), Vienna, Austria, (5e). 11-16 July 2009. doi:10.1016/j.jalz.2009.05.268

  • Coulthard, Alan, Wallace, Sean and Janke, Andrew (2006). A 3D reference magnetization transfer ratio model of the normal brain. In: Australasian Radiology. RANZCR, 57th Annual Scientific Meeting. RANZCR, 57th Annual Scientific Meeting, Christchurch, N.Z., (A37-A37). 26–29 October 2006. doi:10.1111/j.1440-1673.2006.01646.x

  • Coulthard, Alan, Butteriss, David and Janke, Andrew (2005). An age-related T2* signal hypointensity average model. In: David Ball, Australasian Radiology. 55th Annual Scientific Meeting of the Royal Australian and New Zealand College of Radiologists, Perth, Australia, (A10-A10). 21–24 October 2004. doi:10.1111/j.1440-1673.2005.01464.x

  • Rose, Stephen, Janke, Andrew, Griffin, Mark, Finnigan, Simon and Chalk, Jonathan (2005). Improved prediction of final infarct volume using bolus delay-corrected perfusion-weighted MRI: Implications for the ischemic penumbra. In: Internal Medicine Journal. Abstracts presented at the 2004 Annual Scientific Meeting of the Stroke Society of Australasia. 2004 Stroke Society of Australasia Annual Scientific Meeting, Hobart, Australia, (A4-A4). 13-15 October, 2004. doi:10.1111/j.1444-0903.2005.abstract_352.x

  • Finnigan, Simon, Rose, Stephen, Janke, Andrew and Chalk, Jonathan (2005). Quantitative EEG changes rapidly following plasminogen activator administration in acute ischemic stroke: A case study. In: Internal Medicine Journal. Abstracts presented at the 2004 Annual Scientific Meeting of the Stroke Society of Australasia. 2004 Stroke Society of Australasia Annual Scientific Meeting, Hobart, Australia, (A12-A12). 13-15 October, 2004. doi:10.1111/j.1444-0903.2005.abstract_352.x

  • Rose, Stephen, Janke, Andrew, Finnigan, Simon, Read, Stephen and Chalk, Jonathan (2005). Sodium MRI in acute stroke. In: Internal Medicine Journal. Abstracts presented at the 2004 Annual Scientific Meeting of the Stroke Society of Australasia. 2004 Stroke Society of Australasia Annual Scientific Meeting, Hobart, Australia, (A12-A12). 13-15 October, 2004. doi:10.1111/j.1444-0903.2005.abstract_352.x

  • Rose, S., Janke, A., Finnigan, S., Weber, E., Elder, E., McMahon, K. L., Galloway, G. J., Semple, J., Brown, J. and Chalk, Jonathan B. (2005). Sodium magnetic resonance imaging in acute stroke. In: Internal Medicine Journal. Proceedings of: 2004 Annual Scientific Meeting of the Stroke Society of Australasia. 2004 Annual Scientific Meeting of the Stroke Society of Australasia, Hobart, TAS, Australia, (A12-A12). 13-15 October 2004. doi:10.1111/j.1444-0903.2005.abstract_352.x

  • Janke, Andrew, Sánchez-Bornot, José M., Rose, Stephen, Finnigan, Simon, Cuspineda-Bravo, Elena R., Aubert-Vázquez, Eduardo, Valdés-Sosa, Pedro A. and Chalk, Jonathan (2005). Tomographic quantitative EEG mapping in acute stroke. In: Jeff Szer, Internal Medicine Journal. Abstracts presented at the 2004 Annual Scientific Meeting of the Stroke Society of Australasia. The Stroke Society of Australasia (SSA) 2004 Annual Scientific Meeting (ASM), Hobart, TAS, Australia, (A4-A4). 13-16 September 2004. doi:10.1111/j.1444-0903.2005.abstract_352.x

  • Finnigan, Simon, Rose, Stephen, Walsh, Michael, Griffin, Mark, Janke, Andrew, McMahon, Katie, Gillies, Rowan, Pettigrew, Catharine, Semple, James and Chalk, Jonathan B. (2004). Acute quantitative EEG correlates with 30 day outcome from ischemic cortical stroke. In: Internal Medicine Journal. Abstracts presented at the 2003 Annual Scientific Meeting of the Stroke Society oif Australasia. 14th Annual Scientific Meeting of the Stroke Society of Australasia, Sydney, NSW, Australia, (A2-A2). 17-19 September 2003. doi:10.1111/%28ISSN%291445-5994

  • Cuspineda-Bravo, Elena R., Sánchez-Bornot, José M., Valdés-Sosa, Pedro A., Aubert-Vázquez, Eduardo, Finnigan, Simon, Chalk, Jonathan, Rose, Stephen and Janke, Andrew (2004). Hyperacute stroke evolution mapped by individualized tomographic qEEG. In: NeuroImage. Proceedings of: Tenth Annual Meeting of the Organization for Human Brain Mapping. HBM'04: 10th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Budapest, Hungary, (e2525-e2526). 13-17 June 2004,. doi:10.1016/S1053-8119(05)70020-3

  • Thompson, PM, Hayashi, KM, de Zubicaray, G, Janke, AL, Rose, SE, Semple, J, Doddrell, DM, Cannon, TD and Toga, AW (2002). Detecting dynamic and genetic effects on brain structure using high-dimensional cortical pattern matching. In: 2002 Ieee International Symposium On Biomedical Imaging, Proceedings. IEEE International Symposium on Biomedical Imaging, Washington D.C., (473-476). Jul 07-10, 2002.

  • Prima, S., Ayache, N., Janke, A. L., Francis, S. J. and Arnold, D. L. (2002). Statistical analysis of longitudinal MRI data: Applications for detection of disease activity in MS. In: Takeyoshi Dohi and Ron Kikinis, Lecture Notes in Computer Science. Medical Image Computing and Computer-Assisted Intervention — MICCAI 2002 Proceedings, Part I. MICCAI 2002: Fifth International Conference on Medical Image Computing and Computer Assisted Intervention, Tokyo, Japan, (363-371). 24-28 September 2002. doi:10.1007/3-540-45786-0_45

  • Thompson, P. M., de Zubicaray, Greig, Janke, Andrew L., Rose, Stephen E., Dittmer, S., Semple, James, Gravano, D., Han, S., Herman, D., Hong, M. S., Mega, M. S., Cummings, J. L., Doddrell, David M. and Toga, A. W. (2001). Detecting dynamic (4D) profiles of degenerative rates in Alzheimer's disease patients, using high-resolution tensor mapping and a brain atlas encoding atrophic rates in a population. In: Paul Fletcher, Neuroimage. Proceedings of: Seventh annual meeting of the Organization for Human Brain Mapping. HBM2001: 7th Annual Meeting: Organization for Human Brain Mapping Conference, Brighton, U.K., (S849-S849). 10-14 June 2001. doi:10.1016/S1053-8119(01)92191-3

Other Outputs

  • Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017): GRE and QSM average 7T model. The University of Queensland. Dataset. doi:10.14264/uql.2017.178

  • Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017): MP2RAGE T1-weighted average 7T model. The University of Queensland. Dataset. doi:10.14264/uql.2017.266

  • Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017): Turbo Spin Echo average 7T model. The University of Queensland. Dataset. doi:10.14264/uql.2017.267

  • Egan, Gary F., Reutens, David, Galloway, Graham J., Watson, Charles, Andrew Janke, Kurniawan, Nyoman D. and Ullmann, Jeremy F. (2015): Average wild-type C57BL/6J mouse 3D MRI Basal Ganglia labels. The University of Queensland. Dataset. doi:10.14264/uql.2015.867

  • Egan, Gary F., Reutens, David, Bartlett, Perry F., Galloway, Graham J., Paxinos, George, Petrou, Steven, Watson, Charles, Keller, Marianne D., Andrew Janke and Kurniawan, Nyoman D. (2015): Average wild-type C57BL/6J mouse 3D MRI brain image. The University of Queensand. Dataset. doi:10.14264/uql.2015.864

  • Egan, Gary F., Reutens, David, Galloway, Graham J., Watson, Charles, Andrew Janke, Kurniawan, Nyoman D. and Ullmann, Jeremy F. (2015): Average wild-type C57BL/6J mouse 3D MRI cerebellum labels. The University of Queensand. Dataset. doi:10.14264/uql.2015.866

  • Egan, Gary F., Reutens, David, Galloway, Graham J., Watson, Charles, Andrew Janke, Kurniawan, Nyoman D. and Ullmann, Jeremy F. (2015): Average wild-type C57BL/6J mouse 3D MRI cortex labels. The University of Queensand. Dataset. doi:10.14264/uql.2015.865

  • Janke, Andrew (2015): Average wild-type C57BL/6J mouse 3D MRI non-symmetric brain image. Australian Mouse Brain Mapping Consortium. Dataset.

  • Egan, Gary F., Reutens, David, Bartlett, Perry F., Galloway, Graham J., Petrou, Steven, Watson, Charles, Keller, Marianne D., Andrew Janke, Kurniawan, Nyoman D. and Ullmann, Jeremy F. (2015): Average wild-type C57BL/6J mouse 3D MRI non-symmetric brain image. The University of Queensand. Dataset. doi:10.14264/uql.2015.863

  • Reutens, David and Janke, Andrew (2014): Normative MRI-based phenotypic models of morphological structure. The University of Queensland. Collection. doi:10.14264/uql.2017.85

  • Janke, Andrew, Kurniawan, Nyoman D., Ullmann, Jeremy F., Reutens, David, Galloway, Graham J. and Watson, Charles (2013): Average wild-type C57BL/6J mouse 3D MRI hippocampus labels. The University of Queensland. Dataset. doi:10.14264/uql.2015.868

  • Janke, Andrew Lindsay (2003). Cognition driven deformation modelling PhD Thesis, School of Information Technology and Electrical Engineering, The University of Queensland.

Grants (Administered at UQ)

PhD and MPhil Supervision

Current Supervision

Completed Supervision