Schooth, Lauren F., Ahmed, Ahmed Sid, Kang, Seungha, Shah, Ayesha, Fairlie, Thomas, Teh, Jing Jie, Lim, Yenkai, Hoedt, Emily C., Talley, Nicholas J., Keely, Simon, Holtmann, Gerald J. and Morrison, Mark (2022). Strain-level functional and phenotypic resolution of the duodenal mucosa-associated microbiota in functional dyspepsia and healthy control subjects via a novel ex vivo combination of microbe culture and metagenomic sequencing. American Gastroenterological Association Conference 2022, Chicago, IL United States, 6-9 May 2022. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(22)61208-3
Journal Article: The salivary metatranscriptome as an accurate diagnostic indicator of oral cancer
Banavar, Guruduth, Ogundijo, Oyetunji, Toma, Ryan, Rajagopal, Sathyapriya, Lim, Yen Kai, Tang, Kai, Camacho, Francine, Torres, Pedro J., Gline, Stephanie, Parks, Matthew, Kenny, Liz, Perlina, Ally, Tily, Hal, Dimitrova, Nevenka, Amar, Salomon, Vuyisich, Momchilo and Punyadeera, Chamindie (2021). The salivary metatranscriptome as an accurate diagnostic indicator of oral cancer. npj Genomic Medicine, 6 (1) 105, 105. doi: 10.1038/s41525-021-00257-x
Journal Article: Chemoradiation therapy changes oral microbiome and metabolomic profiles in patients with oral cavity cancer and oropharyngeal cancer
Lim, Yenkai, Tang, Kai Dun, Karpe, Avinash V., Beale, David J., Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2021). Chemoradiation therapy changes oral microbiome and metabolomic profiles in patients with oral cavity cancer and oropharyngeal cancer. Head and Neck, 43 (5), 1521-1534. doi: 10.1002/hed.26619
Current trends and management in head and neck cancers
Kulasinghe, Arutha, Lim, Yenkai, Perry, Chris F. L. and Punyadeera, Chamindie (2015). Current trends and management in head and neck cancers. Head and neck cancer: epidemiology, management, and treatment outcomes. (pp. 41-74) edited by Madison R. Hall. New York, NY United States: Nova Science Publishers.
The salivary metatranscriptome as an accurate diagnostic indicator of oral cancer
Banavar, Guruduth, Ogundijo, Oyetunji, Toma, Ryan, Rajagopal, Sathyapriya, Lim, Yen Kai, Tang, Kai, Camacho, Francine, Torres, Pedro J., Gline, Stephanie, Parks, Matthew, Kenny, Liz, Perlina, Ally, Tily, Hal, Dimitrova, Nevenka, Amar, Salomon, Vuyisich, Momchilo and Punyadeera, Chamindie (2021). The salivary metatranscriptome as an accurate diagnostic indicator of oral cancer. npj Genomic Medicine, 6 (1) 105, 105. doi: 10.1038/s41525-021-00257-x
Lim, Yenkai, Tang, Kai Dun, Karpe, Avinash V., Beale, David J., Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2021). Chemoradiation therapy changes oral microbiome and metabolomic profiles in patients with oral cavity cancer and oropharyngeal cancer. Head and Neck, 43 (5), 1521-1534. doi: 10.1002/hed.26619
Kulasinghe, Arutha, Lim, Yenkai, Kapeleris, Joanna, Warkiani, Majid, O'Byrne, Ken and Punyadeera, Chamindie (2020). The use of three-dimensional DNA fluorescent in situ hybridization (3D DNA FISH) for the detection of Anaplastic Lymphoma Kinase (ALK) in Non-Small Cell Lung Cancer (NSCLC) circulating tumor cells. Cells, 9 (6) 1465. doi: 10.3390/cells9061465
Chronic high-fat diet induces early Barrett’s esophagus in mice through lipidome remodeling
Molendijk, Jeffrey, Nguyen, Thi-My-Tam, Brown, Ian, Mohamed, Ahmed, Lim, Yenkai, Barclay, Johanna, Hodson, Mark P., Hennessy, Thomas P., Krause, Lutz, Morrison, Mark and Hill, Michelle M. (2020). Chronic high-fat diet induces early Barrett’s esophagus in mice through lipidome remodeling. Biomolecules, 10 (5) 776, 776. doi: 10.3390/biom10050776
Lim, Yenkai, Fukuma, Naoki, Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2018). The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers. Frontiers in Cellular and Infection Microbiology, 8 (AUG) 267, 267. doi: 10.3389/fcimb.2018.00267
Lim, Yenkai and Punyadeera, Chamindie (2018). A pilot study to investigate the feasibility of transporting saliva samples at room temperature with MAWI Cell Stabilization buffer. Cogent Biology, 4 (1). doi: 10.1080/23312025.2018.1470895
Lim, Yenkai, Totsika, Makrina, Morrison, Mark and Punyadeera, Chamindie (2017). The saliva microbiome profiles are minimally affected by collection method or DNA extraction protocols. Scientific Reports, 7 (1) 8523, 8523. doi: 10.1038/s41598-017-07885-3
A pilot study into the association between oral health status and human papillomavirus-16 infection
Sun, Charles Xiaohang, Bennett, Nigel, Tran, Peter, Tang, Kai Dun, Lim, Yenkai, Frazer, Ian, Samaranayake, Lakshman and Punyadeera, Chamindie (2017). A pilot study into the association between oral health status and human papillomavirus-16 infection. Diagnostics, 7 (1) 11, 11. doi: 10.3390/diagnostics7010011
Oral microbiome: a new biomarker reservoir for oral and oropharyngeal cancers
Lim, Yenkai, Totsika, Makrina, Morrison, Mark and Punyadeera, Chamindie (2017). Oral microbiome: a new biomarker reservoir for oral and oropharyngeal cancers. Theranostics, 7 (17), 4313-4321. doi: 10.7150/thno.21804
Salivary DNA methylation panel to diagnose HPV-positive and HPV-negative head and neck cancers
Lim, Yenkai, Wan, Yunxia, Vagenas, Dimitrios, Ovchinnikov, Dmitry A., Perry, Chris F. L., Davis, Melissa J. and Punyadeera, Chamindie (2016). Salivary DNA methylation panel to diagnose HPV-positive and HPV-negative head and neck cancers. BMC Cancer, 16 (1) 749, 1-12. doi: 10.1186/s12885-016-2785-0
Chai, Ryan C., Lim, Yenkai, Frazer, Ian H., Wan, Yunxia, Perry, Christopher, Jones, Lee, Lambie, Duncan and Punyadeera, Chamindie (2016). A pilot study to compare the detection of HPV-16 biomarkers in salivary oral rinses with tumour p16(INK4a) expression in head and neck squamous cell carcinoma patients. Bmc Cancer, 16 (1) 178, 178. doi: 10.1186/s12885-016-2217-1
Salivary epigenetic biomarkers in head and neck squamous cell carcinomas
Lim, Yenkai, Sun, Charles Xiaohang, Tran, Peter and Punyadeera, Chamindie (2016). Salivary epigenetic biomarkers in head and neck squamous cell carcinomas. Biomarkers in Medicine, 10 (3), 301-313. doi: 10.2217/bmm.16.2
Schooth, Lauren F., Ahmed, Ahmed Sid, Kang, Seungha, Shah, Ayesha, Fairlie, Thomas, Teh, Jing Jie, Lim, Yenkai, Hoedt, Emily C., Talley, Nicholas J., Keely, Simon, Holtmann, Gerald J. and Morrison, Mark (2022). Strain-level functional and phenotypic resolution of the duodenal mucosa-associated microbiota in functional dyspepsia and healthy control subjects via a novel ex vivo combination of microbe culture and metagenomic sequencing. American Gastroenterological Association Conference 2022, Chicago, IL United States, 6-9 May 2022. Philadelphia, PA United States: Elsevier. doi: 10.1016/s0016-5085(22)61208-3
Oral microbiome biomarker panel to detect oral and oropharyngeal cancers in a clinical setting
Lim, Yenkai, Fukuma, Naoki, Totsika, Makrina, Kenny, Liz, Morrison, Mark and Punyadeera, Chamindie (2018). Oral microbiome biomarker panel to detect oral and oropharyngeal cancers in a clinical setting. Annual Meeting of the American-Association-for-Cancer-Research (AACR), Chicago, IL United States, 14-18 April 2018. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.AM2018-577
Lim, Yenkai (2021). Culture studies and genomic characterization of Soho Flordis International (SFI) Research Australia probiotic bacterial strains (Phase-II). N/A: N/A.
Lim, Yenkai (2020). Culture studies and genomic characterization of Soho Flordis International (SFI) Research Australia probiotic bacterial strains (Phase-I). N/A: N/A.