Associate Professor Jim Hanan

Principal Research Fellow

Centre for Plant Science
Queensland Alliance for Agriculture and Food Innovation
j.hanan@uq.edu.au
+61 7 336 51858

Overview

I undertake multi-disciplinary collaborative research developing mathematical, computational and visualisation approaches and techniques that facilitate the research and education in animal and plant systems.

My major research theme is development of mathematical, computer graphics and simulation approaches and techniques that facilitate the study of genetics, physiology, morphogenesis and ecology at the scale of cells, individual plants and insects and their components. These developments in computational biology are being used to increase our understanding of the dynamics of morphogenesis, and as a tool in applied research and education.

Qualifications

  • PhD, University of Regina
  • Master of Science, University of Regina
  • BSc (Hons), University of Manitoba

Publications

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Grants

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Publications

Featured Publications

Book Chapter

Journal Article

Conference Publication

  • Wang, Ming, Cribb, Bronwen, Auzmendi, Inigo and Hanan, Jim (2015). Spatially explicit individual-based modelling of insect- plant interactions: effects of level of detail in Queensland fruit fly models. In: T. Weber, M. J. McPhee and R. S. Anderssen, MODSIM2015, 21st International Congress on Modelling and Simulation. Modelling and Simulation Society of Australia and New Zealand. International Congress on Modelling and Simulation, Gold Coast, QLD, Australia, (375-381). 29 November to 4 December 2015.

  • Moeiniyan Bagheri, Shahrzad, Smith, Graeme and Hanan, Jim (2015). Using Z in the development and maintenance of computational models of real-world systems. In: Carlos Canal and Akram Idani, Software Engineering and Formal Methods: SEFM 2014 Collocated Workshops: HOFM, SAFOME, OpenCert, MoKMaSD, WS-FMDS, Revised Selected Papers. 12th International Conference on Software Engineering and Formal Methods, Grenoble, France, (36-53). 1 - 2 September 2014. doi:10.1007/978-3-319-15201-1_3

  • White, Neil A. and Hanan, Jim (2013). A self-organising model of Macadamia with application to pruning in orchards. In: Risto Sievänen, Eero Nikinmaa, Christophe Godin, Anna Lintunen and Pekka Nygren, Proceedings of the 7th International Conference on Functional-Structural Plant Models. 7th International Conference on Functional-Structural Plant Models (FSPM 2013), Saariselkä, Finland, (287-287). 9-14 June 2013.

  • Hanan, Jim (2013). Functional-structural modelling with L-systems: where from and where to. In: Risto Sievänen, Eero Nikinmaa, Christophe Godin, Anna Lintunen and Pekka Nygren, Proceedings of the 7th International Conference on Functional-Structural Plant Models. 7th International Conference on Functional-Structural Plant Models (FSPM 2013), Saariselkä, Finland, (1-2). 9-14 June 2013.

  • Toh, Ruey, Dhileepan, Kunjithapatham, Shivas, Roger G., Adki, Steve W. and Hanan, Jim (2013). Modeling parthenium weed early canopy architecture in response to environmental factors and the impacts on biological control activity of the summer rust. In: Risto Sievänen, Eero Nikinmaa, Christophe Godin, Anna Lintunen and Pekka Nygren, Proceedings of the 7th International Conference on Functional-Structural Plant Models. 7th International Conference on Functional-Structural Plant Models (FSPM 2013), Saariselkä, Finland, (363-365). 9-14 June 2013.

  • Hanan, Jim (2012). Functional structural plant modelling: Applications beyond the plant. In: Yan Guo, Yves Dumont and Mengzhen Kang, 2012 IEEE 4th International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications : Proceedings : PMA 2012. 4th International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, PMA 2012, Shanghai, Peoples R China, (1-4). 31 October - 3 November 2012. doi:10.1109/PMA.2012.6524803

  • Hanan, Jim, Belward, John, Williams, Barbara A., Shelat, Kinnari and Gidley, Michael J. (2012). Linking in vitro and in vivo models of digestion: a computational modelling approach. In: Food Structures, Digestion and Health Conference 2012, Palmerston North, New Zealand, (). 7-9 March 2012.

  • Williams, B. A., Shelat, K., Hanan, J., Dhital, S. and Gidley, M. J. (2011). An in vitro technique to model digestive behavior of feeds containing soluble fibers. In: 12th International Symposium on Digestive Physiology in Pigs, Keystone, CO, United States, (130-131). 29 May - 1 June 2012.

  • Toh, R., Hanan, J., Dhileepan, K., Shivas, R. G. and Adkins, S. W. (2011). Simulation of parthenium weed canopy under changing climate using L-systems. In: F. Chan, D. Marinova and R. S. Anderssen, MODSIM2011, 19th International Congress on Modelling and Simulation: Proceedings. 19th International Congress on Modelling and Simulation (MODSIM2011), Perth, Australia, (1009-1015). 12-16 December 2011.

  • Cieslak, M., Seleznyova, A.N. and Hanan, J. (2010). A functional-structural kiwifruit vine model. In: B. Li, M. Jaeger and Y. Guo, The Third International Symposium on Plant Growth Modeling Simulation, Visualization and Applications. Plant Growth Modelling and Applications 2009, Beijing, China, (206-213). 9-13 November, 2009. doi:10.1109/PMA.2009.13

  • Han, L., Gresshoff, P. M. and Hanan, J. (2010). Modelling root development with signalling control: A case study based on legume autoregulation of nodulation. In: Plant Growth Modeling and Applications, Proceedings of PMA09. 3rd International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, PMA09, Beijiing, China, (134-141). Nov. 09-13, 2009. doi:10.1109/PMA.2009.40

  • Stolk, Jacob and Hanan, Jim (2009). Emergent models in a multi-level biochemical network regulating pea flowering. In: Interfacing modelling and simulation with mathematical and computational sciences : 18th IMACS World Congress, MODSIM09. IMACS World Congress/Modelling and Simulation Society-of-Australia-and-New-Zealand (MSSANZ)/18th MODSIM09 Biennial Conference on Modelling and Simulation, Cairns, Australia, (810-816). 13-17 July 2009.

  • Birch, Colin J., Thornby, David, Adkins, Steve, Andrieu, Bruno and Hanan, Jim (2008). Architectural modeling of maize under water stress. In: E. Humpreys and K. O'Keeffe, Maize Association of Australia: 6th Triennial Conference and Proceedings. Maize Association of Australia 6th Triennial Conference, Griffith, NSW, Austrlia, (335-341). 21-23 February 2006. doi:10.1071/EA06105

  • Renton, M., Thornby, D. and Hanan, J. (2007). Canonical modelling. In: J. Vos, L. F. M. Marcelis, P. H. B. DeVisser, P. C. Struik and J. B. Evers, Functional-Structural Plant Modelling in Crop Production. Workshop on Functional-Structural Plant Modelling in Crop Production, Wageningen, Netherlands, (151-164). 5-8 March 2006.

  • Han, L., Gresshoff, P. M. and Hanan, J. (2007). Computational approaches for studying signaling mechanisms behind legume autoregulation of nodulation. In: Proceedings of the Bioinformatics Australia Conference, 2007. Bioinformatics Australia 2007, Brisbane, Australia, (). 23-24 October, 2007.

  • Hanan, J., Beveridge, C. A. and Nichols, K. C. (2007). Computational models for inquiry learning in biology. In: Proceedings of the CSIRO Transformational Biology Workshop. CSIRO Transformational Biology Workshop, Black Mountain, Australia, (5-6). 18-20 June, 2007.

  • Han, Liqi, Gresshoff, Peter M. and Hanan, Jim (2007). Computational models for studying signaling control mechanisms behind legume autoregulation of nodulation. In: Abstracts of Complex '07: 8th Asia-Pacific Complex Systems Conference. 8th Asia-Pacific Complex Systems Conference, Gold Coast, Australia, (45-46). 2-7 July, 2007.

  • Dorr, G., Noller, B. N., Woods, N., Hewitt, A. J., Hanan, J. S., Adkins, S. W. and Ricci, P. F. (2007). Development of a Decision-Making Tool to Minimize Environmental and Public Health Risk of Pesticide Application. In: Ivan R. Kennedy, Keith R. Solomon, Shirley J. Gee, Angus N. Crossan, Shuo Wang and Francisco Sanchez-Bayo, ACS SYMPOSIUM SERIES: Rational Environmental management of Agrochemicals: Risk Assessment, Monitoring, and Remedial Action. International Chemical Congress of Pacific Basin Societies (PACIFICHEM 2005), Honolulu, HI, (53-65). 15-20 Dec 2005.

  • Stolk, H. and Hanan, J. S. (2007). Discovering genetic regulatory network models in Pisum sativum. In: L. Oxley and D. Kulasiri, Proceedings of the MODSIM 2007 International Congress on Modelling and Simulation. MODSIM 2007: International Congress on Modelling and Simulation, Christchurch, New Zealand, (1999-2005). 10-13 December 2007.

  • Dun, E., Hanan, J. and Beveridge, C. A. (2007). Hypothesis-driven computational modelling of the shoot branching control network in pea. In: Proceedings of the CSIRO Transformational Biology Workshop. CSIRO Transformational Biology Workshop, Black Mountain, Australia, (3-4). 18-20 June, 2007.

  • Gaur, S., Adkins, S. W., Dorr, G. and Hanan, J. (2007). Interaction of crops, weeds and the environment: 3D architectural modeling and visualization for improved integrated weed management. In: B. Marambe, U. R. Sangkkara, W. M. De Costa and A. S. K. Abeysekara, Proceedings of the 21st Asian Pacific Weed Science Society (APWSS) Conference. 21st Asian Pacific Weed Science Society (APWSS) Conference, Colombo, Sri Lanka, (8-13). 2-6 October 2007.

  • Dorr, Gary J., Hanan, Jim, Hewitt, Andrew J., Adkins, Steve and Noller, Barry N. (2007). Modeling the Interaction of Plant Architecture and Spray Techniques. In: 2007 ASABE Annual International Meeting, Minneapolis, Minnesota, (1-10). 17-20 June, 2007.

  • Dorr, S., Adkins, S., Hanan, J., O'Donnell, C., Hewitt, A. and Noller, B. (2007). Optimisation of herbicide deposition and retention using computer modeling validated through wind tunnel studies. In: B. Marambe, U. R. Sangkkara, W. M. De Costa and A. S. K. Abeysekara, Proceedings of the 21st Asian Pacific Weed Science Society (APWSS) Conference. 21st Asian Pacific Weed Science Society (APWSS) Conference, Colombo, Sri Lanka, (82-87). 2-6 October 2007.

  • Stolk, H. J., Hanan, J. and Zalucki, M. P. (2007). Subpopulation agents emerge from individual agents in metapopulation simulations. In: MODSIM07 International Congress on Modelling and Simulation "Land, Water and Environmental Management : Integrated Systems for Sustainability". International Congress on Modelling and Simulation (MODSIM07), Christchurch New Zealand, (46-52). 10-13 December 2007.

  • Stolk, H. J., Hanan, J. and Zalucki, M. P. (2007). Subpopulation agents emerge from individual agents in metapopulation simulations. In: Oxley, L. and Kulasiri, D., Natural Resources and Biodiversity Management. International Congress on Modelling and Simulation Land, Water & Environmental Management: Integrated Systems for Sustainability, Christchurch, New Zealand, (46-52). 10-13 December 2007.

  • Han, Liqi, Gresshoff, Peter M. and Hanan, Jim (2007). Virtual soybean—a computational model for studying autoregulation of nodulation. In: Proceedings of the FSPM07. FSPM07: 5th International Workshop on Functional Structural Plant Models, Napier, New Zealand, (12-1-12-5). 4-9 November, 2007.

  • Hosseini Cici, S. Z., Adkins, S W and Hanan, J S (2006). 3D modelling of cicer arietinum architecture and phenology: relating phenotype to genotype. In: Handbook & Abstracts 3rd International Conference on Legume Genomics & Genetics. Genes to Crops, Brisbane Convention & Exhibition Centre, (81-81). 9-13 April 2006.

  • Dorr, G. J., Noller, B N, Hewitt, A J, Hanan, J S and Adkins, S W (2006). A decision-making tool to minimise environmental and public health risk of pesticide application. In: Towards a Healthier Queensland through Research and Innovation. 6th Annual Health and Medical Research conference of Queensland, Hilton Hotel, Brisbane, (59-59). 23-24 November 2006.

  • Hosseini Cici, S. Z., Adkins, S. W., Sindel, M. and Hanan, J. S. (2006). Canopy interference of chickpea with sowthistle - model development. In: C. Preston, J. H. Wats and N. D. Crossman, 15th Australian Weeds Conference: Papers and Proceedings. Managing Weeds in a Changing Climate, Adelaide Convention Centre, SA, (426-427). 24-28 September, 2006.

  • Hosseini Cici, S. Z., Hanan, J. S., Sindel, M. and Adkins, S. W. (2006). Phenotypic plasticity of sowthistle and its offspring in response to light availability. In: C. Preston, J. H. Watts and N. D. Crossman, 15th Australian Weeds Conference Proceedings: managing weeds in a changing climate. 15th Australian Weeds Conference: Managing Weeds in a Changing Climate, Adelaide Convention Centre, SA, (172-175). 24-28 September 2006.

  • Dorr, G. J., Hanan, J. S., Woods, N., Kleinmeulman, P. A., Adkins, S. W. and Noller, B. N. (2006). Simulating spray deposition on plant canopies within a wind tunnel. In: L. Alexander, S. Cooper, J. Cross, R. Glass, B. Magri, T. Robinson, D. Stock, B. Tayor, P. Walklate and J. van de Zande, Aspects of Applied Biology: International Advances in Pesticide Application 2006. International Advances in Pesticide Application 2006 conference, Robinson Collee, Cambridge, England, (395-403). 9-11 January, 2006.

  • Duczmal, Katherine, Robinson, Peter and Hanan, Jim (2005). Agent-based virtual insects. In: Robert Bridle, Simon Thornton and Arun Vishwanath, Proceedings of the Australian Undergraduate Students’ Computing Conference 2005. Proceedings of the Australian Undergraduate Students’ Computing Conference 2005, Canberra, Australia, (1-8). 28-29 November, 2005.

  • Loch, B. I., Belward, J. A. and Hanan, J. S. (2005). Application of Surface Fitting Techniques for the Representation of Leaf Surfaces. In: Modsim 2005: International Congress On Modelling and Simulation: Advances and Applications for Management and Decision Making. International Congress on Modelling and Simulation (MODSIM05), Melbourne Australia, (1272-1278). Dec 12-15, 2005.

  • Loch, B.I., Belward, J.A. and Hanan, J.S. (2005). Application of Surface Fitting Techniques for the Representation of Leaf Surfaces. In: Andre Zerger and Robert M. Argent, International Congress on Modelling and Simulation Advances and Applications for Management and Decision Making. MODSIM05, University of Melbourne, (1272-1278). 12-15 December 2005.

  • Dorr, G. J., Hanan, J., Woods, N., Adkins, S., Kleinmeulman, P., Ricci, P. and Noller, B. (2005). Combining Spray Drift and Plant Architecture Modeling to Minimise Environmental and Public Health Risk of Pesticide Application. In: Modsim 2005: International Congress On Modelling and Simulation: Advances and Applications for Management and Decision Making. International Congress on Modelling and Simulation (MODSIM05), Melbourne Australia, (279-285). Dec 12-15, 2005.

  • Dorr, G. J., Hanan, J., Woods, N., Adkins, S., Kleinmeulman, P., Ricci, P. and Noller, B. (2005). Combining spray drift and plant architecture modeling to minimise environmental and public health risk of pesticide application. In: Andre Zerger and Robert M. Argent, MODSIM 2005 International Congress on Modelling and Simulation. MODSIM05 International Congress on Modelling and Simulation, Melbourne, Australia, (279-285). 12-15 December 2005.

  • Dorr, G. J., Noller, B., Hanan, J., Adkins, Stephen W., Woods, N., Hewitt, A. and Ricci, P. (2005). Development of a decision-making tool to minimise environmental and public health risk of pesticide application. In: Proceedings of the 2005 International Chemical Congress of Pacific Basin. 2005 International Chemical Congress of Pacific Basin, Honolulu, Hawaii, USA, (). 15-20 December, 2005.

  • Dorr, G. J., Noller, B. N., Hanan, J., Woods, N. and Adkins, S. W. (2005). Minimising environmental and public health risk from the application of pesticides through a better undersanding of the droplet canopy interface. In: 5th Annual Health and Medical Research Conference of Queensland. 5th Annual Health and Medical Research Conference of Queensland, Brisbane, Queensland, (227-227). 3-4 November, 2005.

  • Hanan, J., Thornby, D. and Adkins, S. (2005). Modelling Cotton Plant Development with L-systems: A template model for incorporating physiology. In: Modsim 2005: International Congress On Modelling and Simulation: Advances and Applications for Management and Decision Making. International Congress on Modelling and Simulation (MODSIM05), Melbourne Australia, (1243-1250). Dec 12-15, 2005.

  • Hanan, J., Thornby, D. and Adkins, S. (2005). Modelling cotton plant development with L-systems: A template model for incorporating physiology. In: Andre Zerger and Robert M. Argent, MODSIM 2005 International Congress on Modelling and Simulation. MODSIM05 International Congress on Modelling and Simulation, Melbourne, Australia, (1243-1250). 12-15 December 2005.

  • Watson, J. R., Hawkins, J. C., Bradley, D. R., Dassanayake, D., Wiles, J. H. and Hanan, J. S. (2005). Towards a network pattern language for complex systems. In: H.A. Abbass, T. Bossomaier and J. Wiles, Recent Advances in Artificial Life. Australian Conference on Artificial Life (ACAL'05), Sydney, Australia, (309-317). 5-9 December 2005.

  • Cici, S. Z. H., Sindel, B. M., Adkins, S. and Hanan, J. (2005). Using L-systems To Simulate Chickpea Cultivars And Their Shading Abilities. In: Modsim 2005: International Congress On Modelling and Simulation: Advances and Applications for Management and Decision Making. International Congress on Modelling and Simulation (MODSIM05), Melbourne Australia, (1230-1236). Dec 12-15, 2005.

  • Cici, S. Z. H., Sindel, B. M., Adkins, S. and Hanan, J. (2005). Using L-systems to simulate chickpea cultivars and their shading abilities. In: Andre Zerger and Robert M. Argent, MODSIM 2005 International Congress on Modelling and Simulation. MODSIM05 International Congress on Modelling and Simulation, Melbourne, Australia, (1230-1236). 12-15 December 2005.

  • Dorr, G. J., Woods, N., O'Donnell, C. C., Hanan, J., Noller, B. N. and Adkins, S. W. (2005). Wind Tunnel Spray Drift Measurements and Modeling. In: Science Week at QHSS 2005. Science Week at QHSS 2005, Brisbane, Queensland, (1-1). 15-19 August, 2005.

  • Renton, M., Hanan, J. S. and Burrage, K. (2004). A canonical toolkit for modelling plant function. In: C. Godin and et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (226-230). 7-11 June, 2004.

  • Thornby, D. F. and Hanan, J. S. (2004). A modelling exploration of branch extension, defoliation responses, and carbohydrate physiology in cotton (Gossypium hirsutum L.). In: C. Godin and et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (319-322). 7-11 June, 2004.

  • Noller, B. N., Woods, N., Adkins, S. W. and Hanan, J. S. (2004). An experimental wind tunnel facility to study the exposure and effect of aerosols containing pesticides biota. In: Workshop on Contaminants and Ecological Risk Assessment. Contaminants and Ecological Risk Assessment, Adelaide, Australia, (19-19). 5-7 April, 2004.

  • Noller, B. N., Woods, N., Adkins, S. W. and Hanan, J. S. (2004). Application of an experimental wind tunnel facility to study the exposure and effect of aerosols containing pesticides on biota. In: Science - a smart state to be in. Interact 2004, Conrad Jupiters Gold Coast, Australia, (157-157). 4-8 July, 2004.

  • Morris, S., Ross, T., Cox, M., Renton, M., Hanan, J. and Beveridge, C. A. (2004). Auxin comes too little too late. In: 18th International Conference on Plant Growth Substances. IPGSA, Canberra, Australia, (102-102). September 2004.

  • Dorr, G. J., Hanan, J. S., Woods, N., Kleinmeulman, P. A., Adkins, S. W. and Noller, B. N. (2004). Combining spray drift and plant architecture modelling. In: C. Ramsay, A. Hewitt, H. Thistle, C. Hoffman, R. Wolf and T. Wolf, Proceedings of the International Conference on Pesticide Application for Drift Management. Intern'l Conf on Pesticide Application for Drift Management, Hawaii/ Hilton Waikoloa Village, (297-301). 27-29 October 2004.

  • Kleinmeulman, P. A., Dorr, G. J., Woods, N., Hewitt, A. J., Noller, B. N., Hanan, J. S. and Adkins, S. W. (2004). Comparing droplet size and velocity of different hydraulic nozzle spray plumes. In: C. Ramsay, A. Hewitt, H. Thistle, C. Hoffman, R. Wolf and T. Wolf, Proceedings of the International Conference on Pesticide Application for Drift Management. Intern'l Conf on Pesticide Application for Drift Management, Hawaii/Hilton Waikoloa Village, (282-282). 27-29 October 2004.

  • Hanan, J. S. and Wang, Y. (2004). Floradig: a configurable program for capturing plant architecture. In: C. Godin et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (407-411). 7-11 June, 2004.

  • Beveridge, Christine, Harding, Elizabeth, Renton, Michael, Bell, Paul, Parmenter, Kathy and Hanan, Jim (2004). Hypothesis driven modelling of long-distance signalling and plant development. In: C. Godin et al, Proceedings of the 4th International Workshop on Functional-Structural Plant Models (FSPM 04). 4th International Workshop on Functional-Structural Plant Models (FSPM 04), Montpellier, France, (390-390). 7-11 June, 2004.

  • Chelle, M., Hanan, J. S. and Autret, H. (2004). Lighting virtual crops: the CARIBU solution for open L-Systems. In: C. Godin et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (194-194). 7-11 June, 2004.

  • Dorr, G. J., Kleinmeulman, P. A., Noller, B. N., Woods, N., Hanan, J. S. and Adkins, S. W. (2004). Minimising environmental and public health risk of pesticide application through understanding the droplet-canopy interface. In: Proceedings 12th Australian Cotton Conference. Quality Cotton - A Living Industry, Gold Coast/Convention and Exhibition Centre, (14-14). 10-12 August 2004.

  • Dorr, G. J., Kleinmeulman, P. A., Noller, B. N., Woods, N., Hanan, J. S. and Adkins, S. W. (2004). Minimising environmental and public health risk of pesticide application through understanding the droplet-canopy interface. In: 4th Annual Queensland Health and Medical Scientific Meetings. 4th Annual Queensland Health and Medical Scientific Meeting, Brisbane/Convention and Exhibition Centre, (233-233). 30 November - 1 December 2004.

  • Hanan, J. S. (2004). Modelling cotton (Gossypium hirsutum L.) with L-systems: A template model for incorporating physiology. In: C. Godin et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (268-272). 7-11 June, 2004.

  • Dorr, G. J., Woods, N., Hewitt, A. J., Hanan, J. S., Kleinmeulman, P. A. and Adkins, S. W. (2004). Modelling wind tunnel drift measurements. In: C. Ramsay, A. Hewitt, H. Thistle, C. Hoffman, R. Wolf and T. Wolf, Proceedings of the International Conference on Pesticide Application for Drift Management. Intern'l Conf on Pesticide Application for Drift Management, Hawaii/Hilton Waikoloa Village, (378-379). 27-29 October 2004.

  • Hanan, J. S., Loch, B. I. and McAleer, T. D. (2004). Processing laser scanner plant data to extract structural information. In: C. Godin et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (9-12). 7-11 June, 2004.

  • Runqiang, B., Hanan, J. S. and Chiba, N. (2004). Statistical data directed evolution of L-system models for botanical trees. In: C. Godin et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (253-256). 7-11 June, 2004.

  • Hanan, J. S. and Auf Der Maur, S. (2004). Visual programming for building plant models. In: C. Godin et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (273-276). 7-11 June, 2004.

  • Loch, B. I., Belward, J. A. and Hanan, J. S. (2003). Boundary treatment for virtual leaf surfaces. In: S.N. Spencer, Graphite 2003. 1st International Conference on Computer Graphics & Interacting Techniques in Australasia & South East Asia, Melbourne, (261-262). 11-14 February 2003.

  • Stolk, Henk, Gates, Kevin and Hanan, Jim (2003). Discovery of Emergent Natural Laws by Hierarchical Multi-Agent Systems. In: J. Liu, B. Faltings, N. Zongh, R. Lu and T. Nishida, Proceedings of the International Conference on Intelligent Agent Technology. IEEE/WIC International Conference on Intelligent Agent Technology, Halifax, Canada, (75-82). October, 2003. doi:10.1109/IAT.2003.1241051

  • Hanan, J., Birch, C. J. and Vos, J. (2003). Modelling the Architecture of Plants: Some Concepts and Potential Applications. In: Birch, C. J. and Wilson, S. R., Versatile Maize -- Golden Opportunities : 5th Australian Maize Conference Proceedings, City Golf Club, Toowoomba, (100-111). 18-20 February, 2003.

  • Hanan, J. S., Birch, C. J. and Voss, J. (2003). Modelling the architecture of plants - some concepts and potential applications. In: C. J. Birch and S. R. Wilson, Versatile Maize - Golden Opportunities. Versatile Maize, Golden Opportunities - 5th Aust. Maize Conf., Toowoomba, Australia, (100-111). 18-20 February, 2003.

  • Adkins, S. W., Navie, S., Norton, G. and Hanan, J. S. (2003). New interactive software for weed science research and education. In: M.C. Casimero, J.D. Janiya and S.M. Pablico, Proceedings I: Nineteenth Asian-Pacific Weed Science Society Conference. Weed Science, Agricultural Sustainability and GMOs, Manila, (853-858). 17-21 March, 2003.

  • Gaur, S. K., Hanan, J. S. and Adkins, S. W. (2003). Plant-level responses of cotton and bladder ketmia. In: M.C. Casimero, J.D. Janiya and S.M. Pablico, Proceedings I: Nineteenth Asian-Pacific Weed Science Society Conference. Weed Science, Agricultural Sustainability and GMOs, Manilia, (496-502). 17-21 March, 2003.

  • Hanan, J. S., Renton, M. and Yorston, E. M. (2003). Simulating and visualizing spray deposition on plant canopies. In: S.N. Spencer, Graphite 2003. 1st International Conference on Computer Graphics & Interacting Techniques in Australasia & South East Asia, Melbourne, (259-260). 11-14 February 2003.

  • Renton, M., Hanan, J. S. and Kaitaniemi, P. (2003). The inside story: Including physiology in structural plant models. In: S.N. Spencer, Graphite 2003. 1st International Conference on Computer Graphics & Interacting Techniques in Australasia & South East Asia, Melbourne, (95-102). 11-14 February 2003.

  • Watson, James, Wiles, Janet and Hanan, Jim (2003). Towards More Relevant Evolutionary Models: Integrating an Artificial Genome With a Developmental Phenotype. In: H. Abbass and J. Wiles, Proceedings of the 1st Australian Conference on Artificial Life. The 1st Australian Conference on Artificial Life (ACAL 2003), Canberra, Australia, (288-298). 6-7 December, 2003.

  • Thornby, D. F., Renton, M. and Hanan, J. S. (2003). Using computational plant science tools to investigate morphological aspects of compensatory growth. In: LNCS2660 Computational Science - ICCS 2003. ICCS 2993, Melbourne, Australia & Petersburg, Russia, (708-717). 7-9 June & 21-25 July 2003. doi:10.1007/3-540-44864-0_73

  • Kumar, S. K., Hanan, J. S. and Adkins, S. W. (2002). Architectural responses of intra- and inter-species plant-plant interactions. In: H. Spafford Jacob, J. Dodd and J.H. Moore, 13th Australian Weeds Conference Paper & Proceedings. 13th Australian Weeds Conference, Perth, W.A./Sheraton Perth Hotel, (261-261). 8-13 September, 2002.

  • Runqiang, B., Chen, Y., Burrage, K., Hanan, J. S., Room, P. M. and Belward, J. A. (2002). Derivation of L-system models from measurements of biological branching structures using genetic algorithms. In: T. Hendtlass and M. Ali, Developments in Applied Artificial Intelligence, Proceedings. 15th International Conference on Industrial & Engineering Applications of Artificial Intelligence & Expert Systems, IEA/AIE 2002, Cairns, Australia, (514-524). 17-20 June, 2002.

  • Beveridge, C. A., Foo, E., Morris, S., Williams, J. S., Yorston, E. M., Hanan, J. S. and Rameau, C. (2002). Thinking laterally about long-distance signaling. In: ComBio 2002 Combined Conference Abstracts. ComBio 2002 Conference, Sydney Convention Centre, (PLE-TUE-07-PLE-TUE-07). 29 September-3 October, 2002.

  • Beveridge, C. A., Hanan, J. S. and Burrage, K. (2001). Integrative plant physiology: Dealing with plant development as the outcome of an integrated, coordinated and dynamic regulatory network. In: Molecular Genetics of Model Legumes Conference Proceedings. Molecular Genetics of Model Legumes - Impact for Legume Biolo, Golm, Germany, (68-68). 15th - 19th of September, 2001.

  • Room, P, Hanan, J and Clarke, T (1998). 3D dynamics, scientific visualisation, VR and PPM in entomology. In: Pest Management - Future Challenges, Vols 1 and 2, Proceedings. 6th Australasian Applied Entomological Research Conference, Brisbane Australia, (A279-A288). Sep 29-Oct 02, 1998.

Edited Outputs

Grants (Administered at UQ)

PhD and MPhil Supervision

Current Supervision

  • Doctor Philosophy — Principal Advisor

    Other advisors:

  • Doctor Philosophy — Principal Advisor

  • Doctor Philosophy — Principal Advisor

  • Doctor Philosophy — Associate Advisor

  • Doctor Philosophy — Principal Advisor

    Other advisors:

Completed Supervision