Markus graduated from the Vienna University of Technology in Technical Physics in 1995 and was awarded his Doctorate in 1999 after which he worked as postdoctoral research associate and then Assistant Professor at the Department of Radiodiagnostics, Medical University Vienna (AT). From 2004 he worked as Senior Researcher at the Donders Institute for Brain, Cognition and Behaviour (Radboud University Nijmegen, NL) and at the Erwin L. Hahn Institute for Magnetic Resonance Imaging (University Essen-Duisburg, DE). In 2014 he relocated to the University of Queensland to head the Ultra-high Field Human MR Research program at the Centre for Advanced Imaging and was awarded an ARC Future Fellowship. In 2019 he joined the School of Information Technology and Electrical Engineering as Full Professor MR Physics and Medical Imaging and has been appointed as Director for the National Imaging Facility – Queensland Node.
Markus has made significant scientific contributions in the fields of Cognitive Neuroscience, Neuroimaging, and MR methods at (ultra-)high field and key contributions to MRI scanner software packages, which are used in MR labs worldwide. Markus’ main interest is to improve our understanding of brain function and disfunction in cognition, neurodegenerative diseases, and cancer by developing new medical imaging techniques. With a focus on human neuroimaging using magnetic resonance imaging (MRI) at high and ultra-high magnetic field strength, he achieved fast, high resolution mapping of magnetic susceptibility related anatomical and functional information in vivo, including characterisation of blood oxygenation, iron storage in tissue, haemorrhage and calcifications. Recent achievements include the development of accurate detection of layer specific functional activation in the human brain, decoding of brain activity and ultra-fast MRI. His research interests are in the fields of MR method development including applications in neuroimaging and neurological diseases such as dementia and cancer, as well as cardiac MR.
Journal Article: A cortical vascular model for examining the specificity of the laminar BOLD signal
Markuerkiaga, Irati, Barth, Markus and Norris, David G. (2016). A cortical vascular model for examining the specificity of the laminar BOLD signal. NeuroImage, 132, 491-498. doi: 10.1016/j.neuroimage.2016.02.073
Journal Article: Pulsed arterial spin labelling at ultra-high field with a B1 +-optimised adiabatic labelling pulse
Zimmer, Fabian, O'Brien, Kieran, Bollmann, Steffen, Pfeuffer, Josef, Heberlein, Keith and Barth, Markus (2016). Pulsed arterial spin labelling at ultra-high field with a B1 +-optimised adiabatic labelling pulse. Magnetic Resonance Materials in Physics, Biology and Medicine, 29 (3), 463-473. doi: 10.1007/s10334-016-0555-2
Journal Article: Simultaneous multislice (SMS) imaging techniques
Barth, Markus, Breuer, Felix, Koopmans, Peter J., Norris, David G. and Poser, Benedikt A. (2015). Simultaneous multislice (SMS) imaging techniques. Magnetic Resonance in Medicine, 75 (1), 63-81. doi: 10.1002/mrm.25897
Journal Article: Fast quantitative susceptibility mapping using 3D EPI and total generalized variation
Langkammer, Christian, Bredies, Kristian, Poser, Benedikt A, Barth, Markus, Reishofer, Gernot, Fan, Audrey Peiwen, Bilgic, Berkin, Fazekas, Franz, Mainero, Caterina and Ropele, Stefan (2015). Fast quantitative susceptibility mapping using 3D EPI and total generalized variation. NeuroImage, 111, 622-630. doi: 10.1016/j.neuroimage.2015.02.041
Journal Article: A study-specific fMRI normalization approach that operates directly on high resolution functional EPI data at 7 Tesla
Grabner, Günther, Poser, Benedikt A., Fujimoto, Kyoko, Polimeni, Jonathan R., Wald, Lawrence L., Trattnig, Siegfried, Toni, Ivan and Barth, Markus (2014). A study-specific fMRI normalization approach that operates directly on high resolution functional EPI data at 7 Tesla. Neuroimage, 100, 710-714. doi: 10.1016/j.neuroimage.2014.06.045
Journal Article: Linear reconstruction of perceived images from human brain activity
Schoenmakers, Sanne, Barth, Markus, Heske, Tom and van Gerven, Marcel (2013). Linear reconstruction of perceived images from human brain activity. NeuroImage, 83, 951-961. doi: 10.1016/j.neuroimage.2013.07.043
Journal Article: Generalized inverse imaging (GIN): Ultrafast fMRI with physiological noise correction
Boyacioglu, Rasim and Barth, Markus (2013). Generalized inverse imaging (GIN): Ultrafast fMRI with physiological noise correction. Magnetic Resonance in Medicine, 70 (4), 962-971. doi: 10.1002/mrm.24528
Journal Article: Memory stabilization with targeted reactivation during human slow-wave sleep
van Dongen, Eelco V., Takashima, Atsuko, Barth, Markus, Zapp, Jascha, Schad, Lothar R., Paller, Ken A. and Fernandez, Guillén (2012). Memory stabilization with targeted reactivation during human slow-wave sleep. Proceedings of the National Academy of Sciences of the United States of America, 109 (26), 10575-10580. doi: 10.1073/pnas.1201072109
Journal Article: Power independent of number of slices (PINS) radiofrequency pulses for low-power simultaneous multislice excitation
Norris, David G., Koopmans, Peter J., Boyacioglu, Rasim and Barth, Markus (2011). Power independent of number of slices (PINS) radiofrequency pulses for low-power simultaneous multislice excitation. Magnetic Resonance in Medicine, 66 (5), 1234-1240. doi: 10.1002/mrm.23152
Journal Article: Layer-specific BOLD activation in human V1
Koopmans, Peter J., Barth, Markus and Norris, David G. (2010). Layer-specific BOLD activation in human V1. Human Brain Mapping, 31 (9), 1297-1304. doi: 10.1002/hbm.20936
Journal Article: Three dimensional echo-planar imaging at 7 Tesla
Poser, B. A., Koopmans, P. J., Witzel, T., Wald, L. L. and Barth, M. (2010). Three dimensional echo-planar imaging at 7 Tesla. NeuroImage, 51 (1), 261-266. doi: 10.1016/j.neuroimage.2010.01.108
Robust, valid and interpretable deep learning for quantitative imaging
(2022–2025) ARC Linkage Projects
Linking human brain structure to function with ultra-high resolution fMRI
(2020–2023) ARC Discovery Projects
National Imaging Facility Queensland Node (RICF Funds)
(2019–2023) Queensland Government Department of Environment and Science
Development of a framework for quality assurance and quality control for magnetic resonance and molecular imaging modalities
Doctor Philosophy
Validation of Quantitative Susceptibility Mapping (QSM) in Magnetic Resonance Imaging
Doctor Philosophy
Improving functional MRI through Modelling and Imaging Microvascular Dynamics
(2023) Doctor Philosophy
A cortical vascular model for examining the specificity of the laminar BOLD signal
Markuerkiaga, Irati, Barth, Markus and Norris, David G. (2016). A cortical vascular model for examining the specificity of the laminar BOLD signal. NeuroImage, 132, 491-498. doi: 10.1016/j.neuroimage.2016.02.073
Pulsed arterial spin labelling at ultra-high field with a B1 +-optimised adiabatic labelling pulse
Zimmer, Fabian, O'Brien, Kieran, Bollmann, Steffen, Pfeuffer, Josef, Heberlein, Keith and Barth, Markus (2016). Pulsed arterial spin labelling at ultra-high field with a B1 +-optimised adiabatic labelling pulse. Magnetic Resonance Materials in Physics, Biology and Medicine, 29 (3), 463-473. doi: 10.1007/s10334-016-0555-2
Simultaneous multislice (SMS) imaging techniques
Barth, Markus, Breuer, Felix, Koopmans, Peter J., Norris, David G. and Poser, Benedikt A. (2015). Simultaneous multislice (SMS) imaging techniques. Magnetic Resonance in Medicine, 75 (1), 63-81. doi: 10.1002/mrm.25897
Fast quantitative susceptibility mapping using 3D EPI and total generalized variation
Langkammer, Christian, Bredies, Kristian, Poser, Benedikt A, Barth, Markus, Reishofer, Gernot, Fan, Audrey Peiwen, Bilgic, Berkin, Fazekas, Franz, Mainero, Caterina and Ropele, Stefan (2015). Fast quantitative susceptibility mapping using 3D EPI and total generalized variation. NeuroImage, 111, 622-630. doi: 10.1016/j.neuroimage.2015.02.041
Grabner, Günther, Poser, Benedikt A., Fujimoto, Kyoko, Polimeni, Jonathan R., Wald, Lawrence L., Trattnig, Siegfried, Toni, Ivan and Barth, Markus (2014). A study-specific fMRI normalization approach that operates directly on high resolution functional EPI data at 7 Tesla. Neuroimage, 100, 710-714. doi: 10.1016/j.neuroimage.2014.06.045
Linear reconstruction of perceived images from human brain activity
Schoenmakers, Sanne, Barth, Markus, Heske, Tom and van Gerven, Marcel (2013). Linear reconstruction of perceived images from human brain activity. NeuroImage, 83, 951-961. doi: 10.1016/j.neuroimage.2013.07.043
Generalized inverse imaging (GIN): Ultrafast fMRI with physiological noise correction
Boyacioglu, Rasim and Barth, Markus (2013). Generalized inverse imaging (GIN): Ultrafast fMRI with physiological noise correction. Magnetic Resonance in Medicine, 70 (4), 962-971. doi: 10.1002/mrm.24528
Memory stabilization with targeted reactivation during human slow-wave sleep
van Dongen, Eelco V., Takashima, Atsuko, Barth, Markus, Zapp, Jascha, Schad, Lothar R., Paller, Ken A. and Fernandez, Guillén (2012). Memory stabilization with targeted reactivation during human slow-wave sleep. Proceedings of the National Academy of Sciences of the United States of America, 109 (26), 10575-10580. doi: 10.1073/pnas.1201072109
Norris, David G., Koopmans, Peter J., Boyacioglu, Rasim and Barth, Markus (2011). Power independent of number of slices (PINS) radiofrequency pulses for low-power simultaneous multislice excitation. Magnetic Resonance in Medicine, 66 (5), 1234-1240. doi: 10.1002/mrm.23152
Layer-specific BOLD activation in human V1
Koopmans, Peter J., Barth, Markus and Norris, David G. (2010). Layer-specific BOLD activation in human V1. Human Brain Mapping, 31 (9), 1297-1304. doi: 10.1002/hbm.20936
Three dimensional echo-planar imaging at 7 Tesla
Poser, B. A., Koopmans, P. J., Witzel, T., Wald, L. L. and Barth, M. (2010). Three dimensional echo-planar imaging at 7 Tesla. NeuroImage, 51 (1), 261-266. doi: 10.1016/j.neuroimage.2010.01.108
Automatic vein segmentation and lesion detection: From SWI-MIPs to MR Venograms
Barnes, Samuel, Barth, Markus and Koopmans, Peter (2011). Automatic vein segmentation and lesion detection: From SWI-MIPs to MR Venograms. Susceptibility Weighted Imaging in MRI: Basic Concepts and Clinical Applications. (pp. 605-618) edited by E. Mark Haacke and Jürgen R. Reichenbach. Hoboken, New Jersey: Wiley-Blackwell. doi: 10.1002/9780470905203.ch32
Functional susceptibility weighted magnetic resonance imaging
Barth, Markus and Rowe, Daniel B. (2011). Functional susceptibility weighted magnetic resonance imaging. Susceptibility Weighted Imaging in MRI: Basic Concepts and Clinical Applications. (pp. 561-576) edited by E. Mark Haacke and Jürgen R. Reichenbach. Hoboken, New Jersey: Wiley-Blackwell. doi: 10.1002/9780470905203.ch30
Beisteiner, Roland and Barth, Markus (2005). Probleme und Lösungsmöglichkeiten bei Patientenuntersuchungen mit funktioneller Magnetresonanztomographie (fMRT). Funktionelle Bildgebung in Psychiatrie und Psychotherapie – Methodische Grundlagen und Klinische Anwendungen. (pp. 74-88) edited by Henrik Walter. Stuttgart: Schattauer Verlag.
Bachrata, Beata, Bollmann, Steffen, Jin, Jin, Tourell, Monique, Dal-Bianco, Assunta, Trattnig, Siegfried, Barth, Markus, Ropele, Stefan, Enzinger, Christian and Robinson, Simon Daniel (2023). Super-resolution QSM in little or No Additional Time for Imaging (NATIve) using 2D EPI imaging in 3 orthogonal planes. NeuroImage, 283 120419, 120419. doi: 10.1016/j.neuroimage.2023.120419
Robinson, Simon Daniel, Bachrata, Beata, Eckstein, Korbinian, Bollmann, Saskia, Bollmann, Steffen, Hodono, Shota, Cloos, Martijn, Tourell, Monique, Jin, Jin, O'Brien, Kieran, Reutens, David C., Trattnig, Siegfried, Enzinger, Christian and Barth, Markus (2023). Improved dynamic distortion correction for fMRI using single‐echo EPI and a readout‐reversed first image (REFILL). Human Brain Mapping, 44 (15), 5095-5112. doi: 10.1002/hbm.26440
Altered brain connectivity in Long Covid during cognitive exertion: a pilot study
Barnden, Leighton, Thapaliya, Kiran, Eaton-Fitch, Natalie, Barth, Markus and Marshall-Gradisnik, Sonya (2023). Altered brain connectivity in Long Covid during cognitive exertion: a pilot study. Frontiers in Neuroscience, 17 1182607. doi: 10.3389/fnins.2023.1182607
HumanBrainAtlas: an in vivo MRI dataset for detailed segmentations
Schira, Mark M., Isherwood, Zoey J., Kassem, Mustafa S., Barth, Markus, Shaw, Thomas B., Roberts, Michelle M. and Paxinos, George (2023). HumanBrainAtlas: an in vivo MRI dataset for detailed segmentations. Brain Structure and Function, 228 (8), 1-15. doi: 10.1007/s00429-023-02653-8
Thapaliya, Kiran, Marshall-Gradisnik, Sonya, Barth, Markus, Eaton-Fitch, Natalie and Barnden, Leighton (2023). Brainstem volume changes in myalgic encephalomyelitis/chronic fatigue syndrome and long COVID patients. Frontiers in Neuroscience, 17 1125208, 1-10. doi: 10.3389/fnins.2023.1125208
Cognolato, Francesco, O’Brien, Kieran, Jin, Jin, Robinson, Simon, Laun, Frederik B., Barth, Markus and Bollmann, Steffen (2023). NeXtQSM—A complete deep learning pipeline for data-consistent Quantitative Susceptibility Mapping trained with hybrid data. Medical Image Analysis, 84 102700, 102700. doi: 10.1016/j.media.2022.102700
Lower hypothalamic volume with lower BMI is associated with shorter survival in patients with ALS
Chang, Jeryn, Shaw, Thomas B., Holdom, Cory J., McCombe, Pamela A., Henderson, Robert D., Fripp, Jurgen, Barth, Markus, Guo, Christine C., Ngo, Shyuan T. and Steyn, Frederik J. (2022). Lower hypothalamic volume with lower BMI is associated with shorter survival in patients with ALS. European Journal of Neurology, 30 (1), 57-68. doi: 10.1111/ene.15589
Modelling the depth‐dependent VASO and BOLD responses in human primary visual cortex
Akbari, Atena, Bollmann, Saskia, Ali, Tonima S. and Barth, Markus (2022). Modelling the depth‐dependent VASO and BOLD responses in human primary visual cortex. Human Brain Mapping, 44 (2), 710-726. doi: 10.1002/hbm.26094
Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T
Chang, Jeryn, Steyn, Frederik, Ngo, Shyuan, Henderson, Robert, Guo, Christine, Bollmann, Steffen, Fripp, Jurgen, Barth, Markus and Shaw, Thomas (2022). Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. Journal of Open Source Software, 7 (76), 4368. doi: 10.21105/joss.04368
New acquisition techniques and their prospects for the achievable resolution of fMRI
Bollmann, Saskia and Barth, Markus (2021). New acquisition techniques and their prospects for the achievable resolution of fMRI. Progress in Neurobiology, 207 101936, 1-15. doi: 10.1016/j.pneurobio.2020.101936
QSMxT: Robust masking and artifact reduction for quantitative susceptibility mapping
Stewart, Ashley Wilton, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Widhalm, Georg, Hangel, Gilbert, Walls, Angela, Goodwin, Jonathan, Eckstein, Korbinian, Tourell, Monique, Morgan, Catherine, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2021). QSMxT: Robust masking and artifact reduction for quantitative susceptibility mapping. Magnetic Resonance in Medicine, 87 (3), 1289-1300. doi: 10.1002/mrm.29048
Cohen-Adad, Julien, Alonso-Ortiz, Eva, Abramovic, Mihael, Arneitz, Carina, Atcheson, Nicole, Barlow, Laura, Barry, Robert L., Barth, Markus, Battiston, Marco, Büchel, Christian, Budde, Matthew, Callot, Virginie, Combes, Anna J. E., De Leener, Benjamin, Descoteaux, Maxime, de Sousa, Paulo Loureiro, Dostál, Marek, Doyon, Julien, Dvorak, Adam, Eippert, Falk, Epperson, Karla R., Epperson, Kevin S., Freund, Patrick, Finsterbusch, Jürgen, Foias, Alexandru, Fratini, Michela, Fukunaga, Issei, Gandini Wheeler-Kingshott, Claudia A. M., Germani, Giancarlo ... Xu, Junqian (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8 (1) 251, 251. doi: 10.1038/s41597-021-01044-0
Cohen-Adad, Julien, Alonso-Ortiz, Eva, Abramovic, Mihael, Arneitz, Carina, Atcheson, Nicole, Barlow, Laura, Barry, Robert L., Barth, Markus, Battiston, Marco, Büchel, Christian, Budde, Matthew, Callot, Virginie, Combes, Anna J. E., De Leener, Benjamin, Descoteaux, Maxime, de Sousa, Paulo Loureiro, Dostál, Marek, Doyon, Julien, Dvorak, Adam, Eippert, Falk, Epperson, Karla R., Epperson, Kevin S., Freund, Patrick, Finsterbusch, Jürgen, Foias, Alexandru, Fratini, Michela, Fukunaga, Issei, Gandini Wheeler-Kingshott, Claudia A. M., Germani, Giancarlo ... Xu, Junqian (2021). Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8 (1) 242, 242. doi: 10.1038/s41597-021-01026-2
Generic acquisition protocol for quantitative MRI of the spinal cord
Cohen-Adad, Julien, Alonso-Ortiz, Eva, Abramovic, Mihael, Arneitz, Carina, Atcheson, Nicole, Barlow, Laura, Barry, Robert L., Barth, Markus, Battiston, Marco, Büchel, Christian, Budde, Matthew, Callot, Virginie, Combes, Anna J. E., De Leener, Benjamin, Descoteaux, Maxime, de Sousa, Paulo Loureiro, Dostál, Marek, Doyon, Julien, Dvorak, Adam, Eippert, Falk, Epperson, Karla R., Epperson, Kevin S., Freund, Patrick, Finsterbusch, Jürgen, Foias, Alexandru, Fratini, Michela, Fukunaga, Issei, Wheeler-Kingshott, Claudia A. M. Gandini, Germani, Giancarlo ... Xu, Junqian (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature Protocols, 16 (10), 4611-4632. doi: 10.1038/s41596-021-00588-0
Cohen-Adad, Julien, Alonso-Ortiz, Eva, Abramovic, Mihael, Arneitz, Carina, Atcheson, Nicole, Barlow, Laura, Barry, Robert L., Barth, Markus, Battiston, Marco, Büchel, Christian, Budde, Matthew, Callot, Virginie, Combes, Anna J. E., De Leener, Benjamin, Descoteaux, Maxime, de Sousa, Paulo Loureiro, Dostál, Marek, Doyon, Julien, Dvorak, Adam, Eippert, Falk, Epperson, Karla R., Epperson, Kevin S., Freund, Patrick, Finsterbusch, Jürgen, Foias, Alexandru, Fratini, Michela, Fukunaga, Issei, Gandini Wheeler-Kingshott, Claudia A. M., Germani, Giancarlo ... Xu, Junqian (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8 (1) 219, 1-17. doi: 10.1038/s41597-021-00941-8
Eckstein, Korbinian, Bachrata, Beata, Hangel, Gilbert, Widhalm, Georg, Enzinger, Christian, Barth, Markus, Trattnig, Siegfried and Robinson, Simon Daniel (2021). Improved susceptibility weighted imaging at ultra-high field using bipolar multi-echo acquisition and optimized image processing: CLEAR-SWI. NeuroImage, 237 118175, 1-17. doi: 10.1016/j.neuroimage.2021.118175
Hamilton-Craig, Christian, Stäeb, Daniel, Al Najjar, Aiman, O’Brien, Kieran, Crawford, William, Fletcher, Sabine, Barth, Markus and Galloway, Graham (2021). 7-tesla functional cardiovascular MR using vectorcardiographic triggering—overcoming the magnetohydrodynamic effect. Tomography, 7 (3), 323-332. doi: 10.3390/tomography7030029
Abbasi‐Rad, Shahrokh, O’Brien, Kieran, Kelly, Samuel, Vegh, Viktor, Rodell, Anders, Tesiram, Yasvir, Jin, Jin, Barth, Markus and Bollmann, Steffen (2021). Improving FLAIR SAR efficiency at 7T by adaptive tailoring of adiabatic pulse power through deep learning estimation. Magnetic Resonance in Medicine, 85 (5), 2462-2476. doi: 10.1002/mrm.28590
Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI
Shaw, Thomas, York, Ashley, Ziaei, Maryam, Barth, Markus and Bollmann, Steffen (2020). Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI. NeuroImage, 218 116798, 116798. doi: 10.1016/j.neuroimage.2020.116798
Field strength influences on gradient recalled echo MRI signal compartment frequency shifts
Sood, Surabhi, Reutens, David C., Kadamangudi, Shrinath, Barth, Markus and Vegh, Viktor (2020). Field strength influences on gradient recalled echo MRI signal compartment frequency shifts. Magnetic Resonance Imaging, 70, 98-107. doi: 10.1016/j.mri.2020.04.018
Shaw, Thomas, York, Ashley, Barth, Markus and Bollmann, Steffen (2020). Towards optimising MRI characterisation of Tissue (TOMCAT) dataset including all Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) data. Data in Brief, 32 106043, 106043. doi: 10.1016/j.dib.2020.106043
Influence of 7T GRE-MRI signal compartment model choice on tissue parameters
Thapaliya, Kiran, Vegh, Viktor, Bollmann, Steffen and Barth, Markus (2020). Influence of 7T GRE-MRI signal compartment model choice on tissue parameters. Frontiers in Neuroscience, 14 271, 271. doi: 10.3389/fnins.2020.00271
Bayesian population receptive field modeling in human somatosensory cortex
Puckett, Alexander M., Bollmann, Saskia, Junday, Keerat, Barth, Markus and Cunnington, Ross (2020). Bayesian population receptive field modeling in human somatosensory cortex. NeuroImage, 208 116465, 116465. doi: 10.1016/j.neuroimage.2019.116465
Non-linear realignment improves hippocampus subfield segmentation reliability
Shaw, Thomas B., Bollmann, Steffen, Atcheson, Nicole T., Strike, Lachlan T., Guo, Christine, McMahon, Katie L., Fripp, Jurgen, Wright, Margaret J., Salvado, Olivier and Barth, Markus (2019). Non-linear realignment improves hippocampus subfield segmentation reliability. NeuroImage, 203 116206, 116206. doi: 10.1016/j.neuroimage.2019.116206
7T GRE-MRI signal compartments are sensitive to dysplastic tissue in focal epilepsy
Thapaliya, Kiran, Urriola, Javier, Barth, Markus, Reutens, David C., Bollmann, Steffen and Vegh, Viktor (2019). 7T GRE-MRI signal compartments are sensitive to dysplastic tissue in focal epilepsy. Magnetic Resonance Imaging, 61, 1-8. doi: 10.1016/j.mri.2019.05.011
DeepQSM - using deep learning to solve the dipole inversion for quantitative susceptibility mapping
Bollmann, Steffen, Rasmussen, Kasper Gade Bøtker, Kristensen, Mads, Blendal, Rasmus Guldhammer, Østergaard, Lasse Riis, Plocharski, Maciej, O'Brien, Kieran, Langkammer, Christian, Janke, Andrew and Barth, Markus (2019). DeepQSM - using deep learning to solve the dipole inversion for quantitative susceptibility mapping. NeuroImage, 195, 373-383. doi: 10.1016/j.neuroimage.2019.03.060
Destruel, Aurelien, Fuentes, Miguel, Weber, Ewald, O'Brien, Kieran, Jin, Jin, Liu, Feng, Barth, Markus and Crozier, Stuart (2019). A numerical and experimental study of RF shimming in the presence of hip prostheses using adaptive SAR at 3 T. Magnetic Resonance in Medicine, 81 (6), 3826-3839. doi: 10.1002/mrm.27688
Bollmann, Steffen, Kristensen, Matilde Holm, Larsen, Morten Skaarup, Olsen, Mathias Vassard, Pedersen, Mads Jozwiak, Østergaard, Lasse Riis, O’Brien, Kieran, Langkammer, Christian, Fazlollahi, Amir and Barth, Markus (2019). SHARQnet – Sophisticated harmonic artifact reduction in quantitative susceptibility mapping using a deep convolutional neural network. Zeitschrift für Medizinische Physik, 29 (2), 139-149. doi: 10.1016/j.zemedi.2019.01.001
Cardiac magnetic resonance imaging at 7 Tesla
Stäb, Daniel, Al Najjar, Aiman, O'Brien, Kieran, Strugnell, Wendy, Richer, Jonathan, Rieger, Jan, Niendorf, Thoralf and Barth, Markus (2019). Cardiac magnetic resonance imaging at 7 Tesla. Journal of Visualized Experiments, 2019 (143) e55853. doi: 10.3791/55853
Destruel, Aurelien, O'Brien, Kieran, Jin, Jin, Liu, Feng, Barth, Markus and Crozier, Stuart (2019). Adaptive SAR mass-averaging framework to improve predictions of local RF heating near a hip implant for parallel transmit at 7 T. Magnetic Resonance in Medicine, 81 (1), 615-627. doi: 10.1002/mrm.27379
Berkers, Ruud M. W. J., Ekman, Matthias, van Dongen, Eelco. V., Takashima, Atsuko, Barth, Markus, Paller, Ken. A. and Fernández, Guillén (2018). Cued reactivation during slow-wave sleep induces brain connectivity changes related to memory stabilization. Scientific Reports, 8 (1) 16958, 16958. doi: 10.1038/s41598-018-35287-6
Liu, Yilong, Lyu, Mengye, Barth, Markus, Yi, Zheyuan, Leong, Alex T. L., Chen, Fei, Feng, Yanqiu and Wu, Ed X. (2018). PEC-GRAPPA reconstruction of simultaneous multislice EPI with slice-dependent 2D Nyquist ghost correction. Magnetic Resonance in Medicine, 81 (3), 1924-1934. doi: 10.1002/mrm.27546
Lyu, Mengye, Barth, Markus, Xie, Victor B., Liu, Yilong, Ma, Xin, Feng, Yanqiu and Wu, Ed X. (2018). Robust SENSE reconstruction of simultaneous multislice EPI with low-rank enhanced coil sensitivity calibration and slice-dependent 2D Nyquist ghost correction. Magnetic Resonance in Medicine, 80 (4), 1376-1390. doi: 10.1002/mrm.27120
McCombe, Pamela A., Ngo, Shyuan T., Guo, Christine Cong, Fazlollahi, Amir, Bollmann, Saskia, Wang, Liting, Hu, Xintao, Barth, Markus, Salvado, Olivier, Davis, Mark, Ceslis, Amelia, Robinson, Gail, Henderson, Robert D. and Steyn, Frederik J. (2018). Patient with ALS with a novel TBK1 mutation, widespread brain involvement, behaviour changes and metabolic dysfunction. Journal of Neurology, Neurosurgery and Psychiatry, 90 (8), 952-954. doi: 10.1136/jnnp-2018-318823
Puckett, Alexander M., Bollmann, Saskia, Poser, Benedikt A., Palmer, Jake, Barth, Markus and Cunnington, Ross (2017). Using multi-echo simultaneous multi-slice (SMS) EPI to improve functional MRI of the subcortical nuclei of the basal ganglia at ultra-high field (7T). NeuroImage, 172, 886-895. doi: 10.1016/j.neuroimage.2017.12.005
Thapaliya, Kiran, Vegh, Viktor, Bollmann, Steffen and Barth, Markus (2017). Assessment of microstructural signal compartments across the corpus callosum using multi-echo gradient recalled echo at 7 T. NeuroImage, 182, 407-416. doi: 10.1016/j.neuroimage.2017.11.029
Puckett, Alex, Bollmann, Saskia, Barth, Markus and Cunnington, Ross (2017). Measuring the effects of attention to individual fingertips in somatosensory cortex using ultra-high field (7T) fMRI. NeuroImage, 161, 179-187. doi: 10.1016/j.neuroimage.2017.08.014
Serial correlations in single-subject fMRI with sub-second TR
Bollmann, Saskia, Puckett, Alexander M., Cunnington, Ross and Barth, Markus (2017). Serial correlations in single-subject fMRI with sub-second TR. NeuroImage, 166, 152-166. doi: 10.1016/j.neuroimage.2017.10.043
Bertleff, Marco, Domsch, Sebastian, Weingärtner, Sebastian, Zapp, Jascha, O'Brien, Kieran, Barth, Markus and Schad, Lothar R (2017). Diffusion parameter mapping with the combined intravoxel incoherent motion and kurtosis model using artificial neural networks at 3 T. NMR in biomedicine, 30 (12) e3833, 1-11. doi: 10.1002/nbm.3833
Bollmann, Steffen, Robinson, Simon Daniel, O'Brien, Kieran, Vegh, Viktor, Janke, Andrew, Marstaller, Lars, Reutens, David and Barth, Markus (2017). The challenge of bias-free coil combination for quantitative susceptibility mapping at ultra-high field. Magnetic Resonance in Medicine, 79 (1), 97-107. doi: 10.1002/mrm.26644
Sepehrband, Farshid, O'Brien, Kieran and Barth, Markus (2017). A time-efficient acquisition protocol for multipurpose diffusion-weighted microstructural imaging at 7 Tesla. Magnetic Resonance in Medicine, 78 (6), 2170-2184. doi: 10.1002/mrm.26608
Correcting dynamic distortions in 7T echo planar imaging using a jittered echo time sequence
Dymerska, Barbara, Poser, Benedikt A., Bogner, Wolfgang, Visser, Eelke, Eckstein, Korbinian, Cardoso, Pedro, Barth, Markus, Trattnig, Siegfried and Robinson, Simon D. (2016). Correcting dynamic distortions in 7T echo planar imaging using a jittered echo time sequence. Magnetic Resonance in Medicine, 76 (5), 1388-1399. doi: 10.1002/mrm.26018
Stäb, Daniel, Bollmann, Steffen, Langkammer, Christian, Bredies, Kristian and Barth, Markus (2016). Accelerated mapping of magnetic susceptibility using 3D planes-on-a-paddlewheel (POP) EPI at ultra-high field strength. NMR in Biomedicine, 30 (4) e3620, e3620. doi: 10.1002/nbm.3620
ECG triggering in ultra-high-field cardiovascular MRI
Staeb, Daniel, Roessler, Juergen, O'Brien, Kieran, Hamilton-Craig, Christian and Barth, Markus (2016). ECG triggering in ultra-high-field cardiovascular MRI. Tomography, 2 (3), 167-174. doi: 10.18383/j.tom.2016.00193
A method for the dynamic correction of B0-related distortions in single-echo EPI at 7T
Dymerska, Barbara, Poser, Benedikt A., Barth, Markus, Trattnig, Siegfried and Robinson, Simon D. (2016). A method for the dynamic correction of B0-related distortions in single-echo EPI at 7T. NeuroImage, 168, 321-331. doi: 10.1016/j.neuroimage.2016.07.009
From ultrahigh to extreme field magnetic resonance: where physics, biology and medicine meet
Niendorf, Thoralf, Barth, Markus, Kober, Frank and Trattnig, Siegfried (2016). From ultrahigh to extreme field magnetic resonance: where physics, biology and medicine meet. Magnetic Resonance Materials in Physics Biology and Medicine, 29 (3), 309-311. doi: 10.1007/s10334-016-0564-1
Echo time-dependent quantitative susceptibility mapping contains information on tissue properties
Sood, Surabhi, Urriola, Javier, Reutens, David C., O'Brien, Kieran, Bollmann, Steffen, Barth, Markus and Vegh, Viktor (2016). Echo time-dependent quantitative susceptibility mapping contains information on tissue properties. Magnetic Resonance in Medicine, 77 (5), 1946-1958. doi: 10.1002/mrm.26281
A cortical vascular model for examining the specificity of the laminar BOLD signal
Markuerkiaga, Irati, Barth, Markus and Norris, David G. (2016). A cortical vascular model for examining the specificity of the laminar BOLD signal. NeuroImage, 132, 491-498. doi: 10.1016/j.neuroimage.2016.02.073
Pulsed arterial spin labelling at ultra-high field with a B1 +-optimised adiabatic labelling pulse
Zimmer, Fabian, O'Brien, Kieran, Bollmann, Steffen, Pfeuffer, Josef, Heberlein, Keith and Barth, Markus (2016). Pulsed arterial spin labelling at ultra-high field with a B1 +-optimised adiabatic labelling pulse. Magnetic Resonance Materials in Physics, Biology and Medicine, 29 (3), 463-473. doi: 10.1007/s10334-016-0555-2
Selective channel combination of MRI signal phase
Vegh, Viktor, O'Brien, Kieran, Barth, Markus and Reutens, David C. (2015). Selective channel combination of MRI signal phase. Magnetic Resonance in Medicine, 76 (5), 1469-1477. doi: 10.1002/mrm.26057
Boyacioglu, Rasim, Schul, Jenni, Koopmans, Peter J., Barth, Markus and Norris, David G. (2015). Improved sensitivity and specificity for resting state and task fMRI with multiband multi-echo EPI compared to multi-echo EPI at 7T. NeuroImage, 119, 352-361. doi: 10.1016/j.neuroimage.2015.06.089
Simultaneous multislice (SMS) imaging techniques
Barth, Markus, Breuer, Felix, Koopmans, Peter J., Norris, David G. and Poser, Benedikt A. (2015). Simultaneous multislice (SMS) imaging techniques. Magnetic Resonance in Medicine, 75 (1), 63-81. doi: 10.1002/mrm.25897
Fast quantitative susceptibility mapping using 3D EPI and total generalized variation
Langkammer, Christian, Bredies, Kristian, Poser, Benedikt A, Barth, Markus, Reishofer, Gernot, Fan, Audrey Peiwen, Bilgic, Berkin, Fazekas, Franz, Mainero, Caterina and Ropele, Stefan (2015). Fast quantitative susceptibility mapping using 3D EPI and total generalized variation. NeuroImage, 111, 622-630. doi: 10.1016/j.neuroimage.2015.02.041
Diffusion tensor characteristics of gyrencephaly using high resolution diffusion MRI in vivo at 7T
Kleinnijenhuis, Michiel, van Mourik, Tim, Norris, David G., Ruiter, Dirk J., van Cappellen van Walsum, Anne-Marie and Barth, Markus (2015). Diffusion tensor characteristics of gyrencephaly using high resolution diffusion MRI in vivo at 7T. NeuroImage, 109, 378-387. doi: 10.1016/j.neuroimage.2015.01.001
Combining phase images from array coils using a short echo time reference scan (COMPOSER)
Robinson, Simon Daniel, Dymerska, Barbara, Bogner, Wolfgang, Barth, Markus, Zaric, Olgica, Goluch, Sigrun, Grabner, Gunther, Deligianni, Xeni, Bieri, Oliver and Trattnig, Siegfried (2015). Combining phase images from array coils using a short echo time reference scan (COMPOSER). Magnetic Resonance in Medicine, 77 (1), 318-327. doi: 10.1002/mrm.26093
Grabner, Günther, Poser, Benedikt A., Fujimoto, Kyoko, Polimeni, Jonathan R., Wald, Lawrence L., Trattnig, Siegfried, Toni, Ivan and Barth, Markus (2014). A study-specific fMRI normalization approach that operates directly on high resolution functional EPI data at 7 Tesla. Neuroimage, 100, 710-714. doi: 10.1016/j.neuroimage.2014.06.045
Corrigendum: The quest for EEG power band correlation with ICA derived fMRI resting state networks
Meyer, Matthias C., Janssen, Ronald J., Van Oort, Erik S. B., Beckmann, Christian F. and Barth, Markus (2014). Corrigendum: The quest for EEG power band correlation with ICA derived fMRI resting state networks. Frontiers in Human Neuroscience, 8 (SEP) 539. doi: 10.3389/fnhum.2014.00539
Boyacioğlu, Rasim, Schulz, Jenni, Müller, Nils C. J., Koopmans, Peter J., Barth, Markus and Norris, David G. (2014). Whole brain, high resolution multiband spin-echo EPI fMRI at 7 T: a comparison with gradient-echo EPI using a color-word Stroop task. NeuroImage, 97, 142-150. doi: 10.1016/j.neuroimage.2014.04.011
BOLD fMRI signal characteristics of S1- and S2-SSFP at 7 Tesla
Goa, Pål E., Koopmans, Peter J., Poser, Benedikt A., Barth, Markus and Norris, David G. (2014). BOLD fMRI signal characteristics of S1- and S2-SSFP at 7 Tesla. Frontiers in Neuroscience, 8 (49) 49, 1-6. doi: 10.3389/fnins.2014.00049
Norris, David G., Boyacioglu, Rasim, Schulz, Jenni, Barth, Markus and Koopmans, Peter J. (2014). Application of PINS radiofrequency pulses to reduce power deposition in RARE/turbo spin echo imaging of the human head. Magnetic Resonance in Medicine, 71 (1), 44-49. doi: 10.1002/mrm.24991
Online decoding of object-based attention using real-time fMRI
Niazi A.M., van den Broek P.L.C., Klanke S., Barth M., Poel M., Desain P. and van Gerven M.A.J. (2014). Online decoding of object-based attention using real-time fMRI. European Journal of Neuroscience, 39 (2), 319-329. doi: 10.1111/ejn.12405
Linear reconstruction of perceived images from human brain activity
Schoenmakers, Sanne, Barth, Markus, Heske, Tom and van Gerven, Marcel (2013). Linear reconstruction of perceived images from human brain activity. NeuroImage, 83, 951-961. doi: 10.1016/j.neuroimage.2013.07.043
Layer-specific diffusion weighted imaging in human primary visual cortex invitro
Kleinnijenhuis, Michiel, Zerbi, Valerio, Kusters, Benno, Slump, Cornelis H., Barth, Markus and van Cappellen van Walsum, Anne-Marie (2013). Layer-specific diffusion weighted imaging in human primary visual cortex invitro. Cortex, 49 (9), 2569-2582. doi: 10.1016/j.cortex.2012.11.015
Goa P.E., Poser B.A. and Barth M. (2013). Modeling and suppression of respiration induced B0-fluctuations in non-balanced steady-state free precession sequences at 7 Tesla. Magnetic Resonance Materials in Physics, Biology and Medicine, 26 (4), 377-387. doi: 10.1007/s10334-012-0343-6
Koopmans P.J., Boyacioglu R., Barth M. and Norris D.G. (2013). Simultaneous multislice inversion contrast imaging using power independent of the number of slices (PINS) and delays alternating with nutation for tailored excitation (DANTE) radio frequency pulses. Magnetic Resonance in Medicine, 69 (6), 1670-1676. doi: 10.1002/mrm.24402
The quest for EEG power band correlation with ICA derived fMRI resting state networks
Meyer M.C., Janssen R.J., van Oort E.S.B., Beckmann C.F. and Barth M. (2013). The quest for EEG power band correlation with ICA derived fMRI resting state networks. Frontiers in Human Neuroscience, 7 (JUN), 315.1-315.9. doi: 10.3389/fnhum.2013.00315
An investigation of RSN frequency spectra using ultra-fast generalized inverse imaging (GIN)
Boyacioglu R., Beckmann C.F. and Barth M. (2013). An investigation of RSN frequency spectra using ultra-fast generalized inverse imaging (GIN). Frontiers in Human Neuroscience, 7 (APR 2013), 156.1-156.7. doi: 10.3389/fnhum.2013.00156
Meyer M.C., Van Oort E.S.B. and Barth M. (2013). Electrophysiological correlation patterns of resting state networks in single subjects: A combined EEG-fMRI study. Brain Topography, 26 (1), 98-109. doi: 10.1007/s10548-012-0235-0
Generalized inverse imaging (GIN): Ultrafast fMRI with physiological noise correction
Boyacioglu, Rasim and Barth, Markus (2013). Generalized inverse imaging (GIN): Ultrafast fMRI with physiological noise correction. Magnetic Resonance in Medicine, 70 (4), 962-971. doi: 10.1002/mrm.24528
Poser B.A., Barth M., Goa P.-E., Deng W. and Stenger V.A. (2013). Single-shot echo-planar imaging with Nyquist ghost compensation: Interleaved dual echo with acceleration (IDEA) echo-planar imaging (EPI). Magnetic Resonance in Medicine, 69 (1), 37-47. doi: 10.1002/mrm.24222
Sleep supports selective retention of associative memories based on relevance for future utilization
van Dongen, Eelco V, Thielen, Jan-Willem, Takashima, Atsuko, Barth, Markus and Fernandez, Guillen (2012). Sleep supports selective retention of associative memories based on relevance for future utilization. PLoS ONE, 7 (8) e43426, e43426.1-e43426.6. doi: 10.1371/journal.pone.0043426
Memory stabilization with targeted reactivation during human slow-wave sleep
van Dongen, Eelco V., Takashima, Atsuko, Barth, Markus, Zapp, Jascha, Schad, Lothar R., Paller, Ken A. and Fernandez, Guillén (2012). Memory stabilization with targeted reactivation during human slow-wave sleep. Proceedings of the National Academy of Sciences of the United States of America, 109 (26), 10575-10580. doi: 10.1073/pnas.1201072109
Kleinnijenhuis, Michael, Barth, Markus, Alexander, Daniel C., van Cappellen van Walsum, Anne-Marie and Norris, David G. (2012). Structure Tensor Informed Fiber Tractography (STIFT) by combining gradient echo MRI and diffusion weighted imaging. NeuroImage, 59 (4), 3941-3954. doi: 10.1016/j.neuroimage.2011.10.078
Visser, Eelke, Poser, Benedikt A., Barth, Markus and Zwiers, Marcel P. (2012). Reference-free unwarping of EPI data using dynamic off-resonance correction with multiecho acquisition (DOCMA). Magnetic Resonance in Medicine, 68 (4), 1247-1254. doi: 10.1002/mrm.24119
Whole brain, high resolution spin-echo resting state fMRI using PINS multiplexing at 7T
Koopmans, Peter J., Boyacioglu, Rasim, Barth, Markus and Norris, David G. (2012). Whole brain, high resolution spin-echo resting state fMRI using PINS multiplexing at 7T. NeuroImage, 62 (3), 1939-1946. doi: 10.1016/j.neuroimage.2012.05.080
van Dongen, Eelco V., Takashima, Atsuko, Barth, Markus and Fernandez, Guillén (2011). Functional connectivity during light sleep is correlated with memory performance for face-location associations. NeuroImage, 57 (1), 262-270. doi: 10.1016/j.neuroimage.2011.04.019
Multi-echo fMRI of the cortical laminae in humans at 7T
Koopmans, Peter J., Barth, Markus, Orzada, Stephan and Norris, David G. (2011). Multi-echo fMRI of the cortical laminae in humans at 7T. NeuroImage, 56 (3), 1276-1285. doi: 10.1016/j.neuroimage.2011.02.042
7 Tesla MRI of microbleeds and white matter lesions as seen in vascular dementia
Theysohn, Jens M., Kraff, Oliver, Maderwald, Stefan, Barth, Markus, Ladd, Susanne C., Forsting, Michael, Ladd, Mark E. and Gizewski, Elke R. (2011). 7 Tesla MRI of microbleeds and white matter lesions as seen in vascular dementia. Journal of Magnetic Resonance Imaging, 33 (4), 782-791. doi: 10.1002/jmri.22513
Advances in high-field bold fmri
Barth, Markus and Poser, Benedikt A. (2011). Advances in high-field bold fmri. Materials, 4 (11), 1941-1955. doi: 10.3390/ma4111941
Norris, David G., Koopmans, Peter J., Boyacioglu, Rasim and Barth, Markus (2011). Power independent of number of slices (PINS) radiofrequency pulses for low-power simultaneous multislice excitation. Magnetic Resonance in Medicine, 66 (5), 1234-1240. doi: 10.1002/mrm.23152
Grabner, Gunther, Haubenberger, Dietrich, Rath, Jakob, Beisteiner, Roland, Auff, Eduard, Trattnig, Siegfried and Barth, Markus (2010). A population-specific symmetric phase model to automatically analyze susceptibility-weighted imaging (SWI) phase shifts and phase symmetry in the human brain. Journal of Magnetic Resonance Imaging, 31 (1), 215-220. doi: 10.1002/jmri.22013
Filtered deconvolution of a simulated and an in vivo phase model of the human brain
Grabner, Gunther, Trattnig, Siegfried and Barth, Markus (2010). Filtered deconvolution of a simulated and an in vivo phase model of the human brain. Journal of Magnetic Resonance Imaging, 32 (2), 289-297. doi: 10.1002/jmri.22246
Layer-specific BOLD activation in human V1
Koopmans, Peter J., Barth, Markus and Norris, David G. (2010). Layer-specific BOLD activation in human V1. Human Brain Mapping, 31 (9), 1297-1304. doi: 10.1002/hbm.20936
Dammann,Philipp, Barth, Markus, Zhu, Yuan, Maderwald, Stefan, Schlamann, Marc, Ladd, Mark E. and Sure, Ulrich (2010). Susceptibility weighted magnetic resonance imaging of cerebral cavernous malformations: prospects, drawbacks, and first experience at ultra-high field strength (7-Tesla) magnetic resonance imaging.. Neurosurgical focus, 29 (3), 1-7. doi: 10.3171/2010.6.FOCUS10130
T2-weighted 3D fMRI using S2-SSFP at 7 tesla
Barth, Markus, Meyer, Heiko, Kannengiesser, Stephan A. R., Polimeni, Jonathan R., Wald, Lawrence L. and Norris, David G. (2010). T2-weighted 3D fMRI using S2-SSFP at 7 tesla. Magnetic Resonance in Medicine, 63 (4), 1015-1020. doi: 10.1002/mrm.22283
Three dimensional echo-planar imaging at 7 Tesla
Poser, B. A., Koopmans, P. J., Witzel, T., Wald, L. L. and Barth, M. (2010). Three dimensional echo-planar imaging at 7 Tesla. NeuroImage, 51 (1), 261-266. doi: 10.1016/j.neuroimage.2010.01.108
Phase unwrapping of MR images using ΦUN - A fast and robust region growing algorithm
Witoszynskyj, Stephan, Rauscher, Alexander, Reichenbach, Jürgen R. and Barth, Markus (2009). Phase unwrapping of MR images using ΦUN - A fast and robust region growing algorithm. Medical Image Analysis, 13 (2), 257-268. doi: 10.1016/j.media.2008.10.004
Rauscher, Alexander, Barth, Markus, Herrmann, Karl-Heinz, Witoszynskyj, Stephan, Deistung, Andreas and Reichenbach, Jüergen R. (2008). Improved elimination of phase effects from background field inhomogeneities for susceptibility weighted imaging at high magnetic field strengths. Magnetic Resonance Imaging, 26 (8), 1145-1151. doi: 10.1016/j.mri.2008.01.029
MR venography of the human brain using susceptibility weighted imaging at very high field strength
Koopmans, Peter J., Manniesing, Rashindra, Niessen, Wiro J., Viergever, Max A. and Barth, Markus (2008). MR venography of the human brain using susceptibility weighted imaging at very high field strength. Magnetic Resonance Materials in Physics, Biology and Medicine, 21 (1-2), 149-158. doi: 10.1007/s10334-007-0101-3
Stadler, Alfred, Jakob, Peter M., Griswold, Mark, Stiebellehner, Leopold, Barth, Markus and Bankier, Alexander A. (2008). T1 mapping of the entire lung parenchyma: Influence of respiratory phase and correlation to lung function test results in patients with diffuse lung disease. Magnetic Resonance in Medicine, 59 (1), 96-101. doi: 10.1002/mrm.21446
Barth, M. and Norris, D. G. (2007). Very high-resolution three-dimensional functional MRI of the human visual cortex with elimination of large venous vessels. NMR in Biomedicine, 20 (5), 477-484. doi: 10.1002/nbm.1158
Gartus, Andreas, Geissler, Alexander, Foki, Thomas, Tahamtan, Amir Reza, Pahs, Gerald, Barth, Markus, Pinker, Katja, Trattnig, Siegfried and Beisteiner, Roland (2007). Comparison of fMRI coregistration results between human experts and software solutions in patients and healthy subjects. European Radiology, 17 (6), 1634-1643. doi: 10.1007/s00330-006-0459-z
Contrast-to-noise ratio (CNR) as a quality parameter in fMRI
Geissler, Alexander, Gartus, Andreas, Foki, Thomas, Tahamtan, Amir Reza, Beisteiner, Roland and Barth, Markus (2007). Contrast-to-noise ratio (CNR) as a quality parameter in fMRI. Journal of Magnetic Resonance Imaging, 25 (6), 1263-1270. doi: 10.1002/jmri.20935
Noebauer-Huhmann, Iris-Melanie, Pinker, Katja, Barth, Markus, Mlynarik, Vladimir, Ba-Ssalamah, Ahmed, Saringer, Walter F., Weber, Michael, Benesch, Thomas, Witoszynskyj, Stephan, Rauscher, Alexander, Reichenbach, Juergen and Trattnig, Siegfried (2006). Contrast-enhanced, high-resolution, susceptibility-weighted magnetic resonance imaging of the brain: dose-dependent optimization at 3 Tesla and 1.5 Tesla in healthy volunteers. Investigative Radiology, 41 (3), 249-255. doi: 10.1097/01.rli.0000188360.24222.5e
Hamans, Bob C., Barth, Markus, Leenders, William P. and Heerschap, Arend (2006). Contrast Enhanced Susceptibility Weighted Imaging (CE-SWI) of the Mouse Brain Using Ultrasmall Superparamagnetic Ironoxide Particles (USPIO). Zeitschrift Fur Medizinische Physik, 16 (4), 269-274. doi: 10.1078/0939-3889-00325
Roessler, K., Donat, M., Lanzenberger, R., Novak, K., Geissler, A., Gartus, A., Tahamtan, A. R., Milakara, D., Czech, T., Barth, M., Knosp, E. and Beisteiner, R. (2005). Evaluation of preoperative high magnetic field motor functional MRI (3 Tesla) in glioma patients by navigated electrocortical stimulation and postoperative outcome. Journal of Neurology, Neurosurgery and Psychiatry, 76 (8), 1152-1157. doi: 10.1136/jnnp.2004.050286
Rauscher, Alexander, Sedlacik, Jan, Barth, Markus, Haacke, E. Mark and Reichenbach, Juergen R. (2005). Nonnvasive assessment of vascular architecture and function during modulated blood oxygenation using susceptibility weighted magnetic resonance imaging. Magnetic Resonance in Medicine, 54 (1), 87-95. doi: 10.1002/mrm.20520
T1 mapping of the entire lung parenchyma: influence of the respiratory phase in healthy individuals
Stadler, Alfred, Jakob, Peter M., Griswold, Mark, Barth, Markus and Bankier, Alexander A. (2005). T1 mapping of the entire lung parenchyma: influence of the respiratory phase in healthy individuals. Journal of Magnetic Resonance Imaging, 21 (6), 759-764. doi: 10.1002/jmri.20319
Magnetic susceptibility-weighted MR phase imaging of the human brain
Rauscher, A, Sedlacik, J, Barth, M, Mentzel, HJ and Reichenbach, JR (2005). Magnetic susceptibility-weighted MR phase imaging of the human brain. American Journal of Neuroradiology, 26 (4), 736-742.
FMRI reveals functional cortex in a case of inconclusive Wada testing
Lanzenberger, Rupert, Wiest, Gerald, Geissler, Alexander, Barth, Markus, Ringl, Helmut, Wober, Christian, Gartus, Andreas, Baumgartner, Christoph and Beisteiner, Roland (2005). FMRI reveals functional cortex in a case of inconclusive Wada testing. Clinical Neurology and Neurosurgery, 107 (2), 147-151. doi: 10.1016/j.clineuro.2004.06.006
Influence of fMRI smoothing procedures on replicability of fine scale motor localization
Geissler, Alexander, Lanzenberger, Rupert, Barth, Markus, Tahamtan, Amir Reza, Milakara, Denny, Gartus, Andreas and Beisteiner, Roland (2005). Influence of fMRI smoothing procedures on replicability of fine scale motor localization. NeuroImage, 24 (2), 323-331. doi: 10.1016/j.neuroimage.2004.08.042
Robust field map generation using a triple-echo acquisition
Windischberger, Christian, Robinson, Simon, Rauscher, Alexander, Barth, Markus and Moser, Ewald (2004). Robust field map generation using a triple-echo acquisition. Journal of Magnetic Resonance Imaging, 20 (4), 730-734. doi: 10.1002/jmri.20158
Wavelet-based multifractal analysis of fMRI time series
Shimizu, Yu, Barth, Markus, Windischberger, Christian, Moser, Ewald and Thurner, Stefan (2004). Wavelet-based multifractal analysis of fMRI time series. NeuroImage, 22 (3), 1195-1202. doi: 10.1016/j.neuroimage.2004.03.007
A quantitative comparison of functional MRI cluster analysis
Dimitriadou, Evgenia, Barth, Markus, Windischberger, Christian, Hornik, Kurt and Moser, Ewald (2004). A quantitative comparison of functional MRI cluster analysis. Artificial Intelligence in Medicine, 31 (1), 57-71. doi: 10.1016/j.artmed.2004.01.010
Kontrastmittelanwendung auf Hochfeld-(3 T-)MRT
Trattnig, S., Ba-Ssalamah, A., Nobauer-Huhmann, I. M., Barth, M., Pinker, K. and Mlynarik, V. (2004). Kontrastmittelanwendung auf Hochfeld-(3 T-)MRT. Der Radiologe, 44 (1), 56-64. doi: 10.1007/s00117-003-0964-x
Fuzzy cluster analysis of high-field functional MRI data
Windischberger, C, Barth, M, Lamm, C, Schroeder, L, Bauer, H, Gur, RC and Moser, E (2003). Fuzzy cluster analysis of high-field functional MRI data. Artificial Intelligence in Medicine, 29 (3), 203-223. doi: 10.1016/S0933-3657(02)00072-6
MR contrast agent at high-field MRI (3 Tesla)
Trattnig, Siegfried, Ba-Ssalamah, Ahmed, Noebauer-Huhmann, Iris-Melanie, Barth, Markus, Wolfsberger, Stefan, Pinker, Katja and Knosp, Engelbert (2003). MR contrast agent at high-field MRI (3 Tesla). Topics in Magnetic Resonance Imaging, 14 (5), 365-375. doi: 10.1097/00002142-200310000-00003
Automated unwrapping of MR phase images applied to BOLD MR-venography at 3 tesla
Rauscher, Alexander, Barth, Markus, Reichenbach, Jürgen R., Stollberger, Rudolf and Moser, Ewald (2003). Automated unwrapping of MR phase images applied to BOLD MR-venography at 3 tesla. Journal of Magnetic Resonance Imaging, 18 (2), 175-180. doi: 10.1002/jmri.10346
Scaling laws and persistence in human brain activity
Thurner, S, Windischberger, C, Moser, E, Walla, P and Barth, M (2003). Scaling laws and persistence in human brain activity. Physica A-Statistical Mechanics and its Applications, 326 (3-4), 511-521. doi: 10.1016/S0378-4371(03)00279-6
Barth, M, Nobauer-Huhmann, IM, Reichenbach, JR, Mlynarik, V, Schoggl, A, Matula, C and Trattnig, S (2003). High-resolution three-dimensional contrast-enhanced blood oxygenation level-dependent magnetic resonance venography of brain tumors at 3 Tesla: First clinical experience and comparison with 1.5 Tesla. Investigative Radiology, 38 (7), 409-414. doi: 10.1097/01.RLI.0000069790.98435.e7
Barth, Markus, Nöbauer-Huhmann, Iris-Melanie, Reichenbach, Jürgen R, Mlynárik, Vladimir, Schöggl, Andreas, Matula, Christian and Trattnig, Siegfried (2003). High-resolution three-dimensional contrast-enhanced blood oxygenation level-dependent magnetic resonance venography of brain tumors at 3 Tesla: first clinical experience and comparison with 1.5 Tesla. Investigative Radiology, 38 (7), 409-414. doi: 10.1097/01.RLI.0000069790.89435.e7
Comparison of multi-echo spiral and echo planar imaging in functional MRI
Klarhofer, M, Barth, M and Moser, E (2002). Comparison of multi-echo spiral and echo planar imaging in functional MRI. Magnetic Resonance Imaging, 20 (4), 359-364. doi: 10.1016/S0730-725X(02)00505-2
Magnetic resonance imaging contrast enhancement of brain tumors at 3 tesla versus 1.5 tesla
Nobauer-Huhmann, Iris Melanie, Ba-Ssalamah, Ahmed, Mlynarik, Vladimir, Barth, Markus, Schoggl, Alexander, Heimberger, Karl, Matula, Christian, Fog, Amura, Kaider, Alexandra and Trattnig, Siegfried (2002). Magnetic resonance imaging contrast enhancement of brain tumors at 3 tesla versus 1.5 tesla. Investigative Radiology, 37 (3), 114-119. doi: 10.1097/00004424-200203000-00003
Barth, Markus, Windischberger, Christian, Klarhofer, Markus and Moser, Ewald (2001). Characterization of BOLD activation in multi-echo fMRI data using fuzzy cluster analysis and a comparison with quantitative modeling. NMR in Biomedicine, 14 (7-8), 484-489. doi: 10.1002/nbm.737
High-resolution MR venography at 3.0 Tesla
Reichenbach J.R., Barth M., Haacke E.M., Klarhofer M., Kaiser W.A. and Moser E. (2000). High-resolution MR venography at 3.0 Tesla. Journal of Computer Assisted Tomography, 24 (6), 949-957. doi: 10.1097/00004728-200011000-00023
Beisteiner, Roland, Edward, Vinod, Langenberger, Karl, Barth, Markus, Windischberger, Christian, Erdler, Marcus, Cunnington, Ross and Moser, Ewald (1999). Event related FMRI with simulataneous high temporal and high spatial resolution and without relevant image distortion. NeuroImage, 9 (6 PART II)
Fuzzy clustering as a model-free analysis method in single-event fMRI
Windischberger, Christian, Barth, Markus, Beisteiner, Roland, Cunnington, Ross, Edward, Vinod, Erdler, Markus, Kaindl, Thomas and Moser, Ewald (1999). Fuzzy clustering as a model-free analysis method in single-event fMRI. NeuroImage, 9 (6 PART II)
Single-event functional MRI of supplementary and primary motor cortical areas
Cunnington, Ross, Windischberger, Christian, Barth, Marcus, Beisteiner, Roland, Edward, Vinod, Erdler, Marcus, Kaindl, Thomas and Moser, Ewald (1999). Single-event functional MRI of supplementary and primary motor cortical areas. NeuroImage, 9 (6 PART II)
Spiral imaging and fuzzy cluster analysis in single-trial fMRI
Barth, Markus, Windischberger, Christian and Moser, Ewald (1999). Spiral imaging and fuzzy cluster analysis in single-trial fMRI. NeuroImage, 9 (6 PART II)
Functional MRI of the human motor cortex using single-shot, multiple gradient-echo spiral imaging
Barth, M, Metzler, A, Klarhofer, M, Roll, S, Moser, E and Leibfritz, D (1999). Functional MRI of the human motor cortex using single-shot, multiple gradient-echo spiral imaging. Magnetic Resonance Imaging, 17 (9), 1239-1243. doi: 10.1016/S0730-725X(99)00087-9
High-resolution, multiple gradient-echo functional MRI at 1.5 T
Barth, M, Reichenbach, JR, Venkatesan, R, Moser, E and Haacke, EM (1999). High-resolution, multiple gradient-echo functional MRI at 1.5 T. Magnetic Resonance Imaging, 17 (3), 321-329. doi: 10.1016/S0730-725X(98)00191-X
Explorative signal processing in functional MR imaging
Moser, E, Baumgartner, R, Barth, M and Windischberger, C (1999). Explorative signal processing in functional MR imaging. International Journal of Imaging Systems and Technology, 10 (2), 166-176. doi: 10.1002/(SICI)1098-1098(1999)10:2<166::AID-IMA7>3.0.CO;2-F
256 by 256 single shot EPI at 3 Tesla
Windischberger, C., Barth, M. and Moser, E. (1998). 256 by 256 single shot EPI at 3 Tesla. NeuroImage, 7 (4 PART II), S580.
Is MEG superior to EPI FMRI in localizing neuronal activity?
Beisteiner, R., Windischberger, C., Edward, V., Kaindl, Th, Barth, M., Erdler, M. and Moser, E. (1998). Is MEG superior to EPI FMRI in localizing neuronal activity?. NeuroImage, 7 (4 PART II)
Proton NMR relaxation times of human blood samples at 1.5 T and implications for functional MRI
Barth, Markus. and Moser, Ewald. (1997). Proton NMR relaxation times of human blood samples at 1.5 T and implications for functional MRI. Cellular and Molecular Biology, 43 (5), 783-791.
Proton NMR relaxation times of human blood samples at 1.5 T and implications for functional MRI
Barth, Markus and Moser, Ewald (1997). Proton NMR relaxation times of human blood samples at 1.5 T and implications for functional MRI. Cellular and Molecular Biology, 43 (5), 783-91.
Magnetic resonance imaging on a low-field system (0.2 T): Comparison with a 1.0-T system
Trattnig S., Kontaxis G., Breitenseher M., Czerny Ch., Rand T., Turetschek K., Barth M. and Imhof H. (1997). Magnetic resonance imaging on a low-field system (0.2 T): Comparison with a 1.0-T system. Radiologe, 37 (10), 773-777. doi: 10.1007/s001170050281
Barth, M, Diemling, M and Moser, E (1997). Modulation of signal changes in gradient-recalled echo functional MRI with increasing echo time correlate with model calculations. Magnetic Resonance Imaging, 15 (7), 745-752. doi: 10.1016/S0730-725X(97)00043-X
Quantification of signal changes in gradient recalled echo FMRI
Diemling, M, Barth, M and Moser, E (1997). Quantification of signal changes in gradient recalled echo FMRI. Magnetic Resonance Imaging, 15 (7), 753-762. doi: 10.1016/S0730-725X(97)00030-1
Hooper, Padriac, Tourell, Monique, O'Brien, Kieran, Jin, Jin, Robinson, Simon and Barth, Markus (2023). Development of a Quantitative Susceptibility Mapping (QSM) phantom for validation of acquisition strategies and post-processing tools at 3 T. Concord, CA: ISMRM. doi: 10.58530/2022/1983
Jain, Naman, Bollmann, Saskia, Polimeni, Jonathan, Chuang, Kai-Hsiang and Barth, Markus (2023). Evaluating ultra-short echo time (UTE) cerebral blood volume (CBV)-based fMRI using an iron-oxide contrast agent in mouse visual cortex at 9.4T. ISMRT 31st Annual Meeting, London, United Kingdom, 7-12 May 2022. Concord, CA USA: ISMRM. doi: 10.58530/2022/2336
Evaluation of the REFILL dynamic distortion correction method for fMRI
Robinson, Simon, Bachrata, Beata, Eckstein, Korbinian, Dymerska, Barbara, Bollmann, Saskia, Bollmann, Steffen, Hodono, Shota, Cloos, Martijn, Tourell, Monique, Jin, Jin, O'Brien, Kieran, Reutens, David, Trattnig, Siegfried, Enzinger, Christian and Barth, Markus (2023). Evaluation of the REFILL dynamic distortion correction method for fMRI. Joint Annual Meeting ISMRM-ESMRMB ISMRT 31st Annual Meeting, London, United Kingdom, 7 - 12 May 2022. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2022/2807
Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T
Chang, Jeryn, Steyn, Frederik, Ngo, Shyuan, Henderson, Robert, Guo, Christine, Bollmann, Steffen, Fripp, Jurgen, Barth, Markus and Shaw, Thomas (2023). Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. Concord, CA: ISMRM. doi: 10.58530/2022/3808
Velocity selective arterial spin labelling using parallel transmission
Wu, Chia-Yin, Jin, Jin, Dixon, Carl, Maillet, Donald, Barth, Markus and Cloos, Martijn (2023). Velocity selective arterial spin labelling using parallel transmission. 2022 Joint Annual Meeting ISMRM-ESMRMB and ISMRT 31st Annual Meeting, London, United Kingdom, 7-12 May 2022. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2022/2936
Stewart, Ashley Wilton, Goodwin, Jonathan, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Barth, Markus and Bollmann, Stefan (2022). Quantitative susceptibility mapping as an alternative to CT for localizing gold intraprostatic fiducial markers. ISMRM 2022, London, United Kingdom, 7-12 May 2022. Concord, CA USA: International Society for Magnetic Resonance in Medicine.
QSMxT: a fully automated, quantitative susceptibility mapping pipeline
Stewart, Ashley, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Walls, Angela, Narayanan, Aswin, Barth, Markus and Bollman, Steffen (2021). QSMxT: a fully automated, quantitative susceptibility mapping pipeline. AusIron 2021, Brisbane, QLD Australia, 29 November 2021. Brisbane, QLD Australia: QIMR Berghofer Medical Research Institute.
QSM as an alternative to CT for localizing gold intraprostatic fiducial markers
Wilton Stewart, Ashley, Goodwin, Jonathan, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Barth, Markus and Bollmann, Steffen (2021). QSM as an alternative to CT for localizing gold intraprostatic fiducial markers. 3rd Annual Meeting of the ISMRM ANZ Chapter, 2021, Online, 22-23 November 2021. International Society for Magnetic Resonance in Medicine ANZ Chapter.
QSMxT:a fully automated, quantitative susceptibility mapping pipeline
Stewart, Ashley Wilton, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Walls, Angela, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2021). QSMxT:a fully automated, quantitative susceptibility mapping pipeline. 3rd Annual Meeting of the ISMRM ANZ Chapter, 2021, Online, 22-23 November. International Society for Magnetic Resonance in Medicine ANZ Chapter.
Hamilton-Craig, C., Staeb, D., O''brien, K., Galloway, G. and Barth, M. (2019). 7-Tesla Cardiac MRI with vector-ECG gating despite the magnetohydrodynamic effect in healthy volunteers. In: Unknown, Unknown, (326-326). Unknown.
7-Tesla Cardiac MRI for ventricular and valvular quantitation in healthy volunteers
Hamilton-Craig, C., Staeb, D., O'Brien, K., Galloway, G. and Barth, M. (2018). 7-Tesla Cardiac MRI for ventricular and valvular quantitation in healthy volunteers. European Society of Cardiology Congress (ESCC 2018), Munich, Germany, 25-29 August 2018. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/eurheartj/ehy565.1163
Thapaliya, Kiran, Barth, Markus, Bollmann, Steffen, Reutens, David and Vegh, Viktor (2018). 7T GRE-MRI frequency shifts obtained from signal compartments can differentiate normal from dysplastic tissue in focal epilepsy. ISMRM, Paris, France, 16-21 June 2018.
Echo time dependence in temporal frequency shift curves at 3T and 7T
Sood, Surabhi, Reutens, David, Kadamangudi, Shrinath, Barth, Markus and Vegh, Viktor (2018). Echo time dependence in temporal frequency shift curves at 3T and 7T. ISMRM, Paris, France, 16-21 June 2018.
Bollmann, Steffen, Kelly, Samuel, Vegh, Viktor, Rodell, Anders, Tesiram, Yas, Barth, Markus and O'Brien, Kieran (2018). Improving FLAIR SAR efficiency by predicting B1-maps at 7T from a standard localizer scan using deep convolutional neural networks. ISMRM, Paris, France, 17-21 June 2018.
Thapaliya, Kiran, Vegh, Viktor, Bollmann, Steffen and Barth, Markus (2018). Myelin water fraction across the corpus callosum using multi-echo gradient echo at 7T - influence of model settings and flip angle. ISMRM, Paris, France, 16-21 June 2018.
J. Munk, N. Jacobsen, M. Plocharski, L. R. Østergaard, M. Barth, A. Janke and S. Bollmann (2017). Contrast Matching of Ultra-High Resolution Minimum Deformation Averaged MRI Models to Facilitate Computation of a Multi-Modal Model of the Human Brain. ISMRM, Honolulu, 22-27 April 2017.
Bollmann, Steffen, Andrew Janke and Markus Barth (2017). Deep Mapping: Using deep convolutional neural networks to estimate quantitative T1 maps trained on a 7 T minimum deformation average model. ISMRM, Honolulu, 22-27 April 2017.
Saskia Bollmann, Steffen Bollmann, Alex Puckett, Andrew Janke and Markus Barth (2017). Non-Linear Realignment Using Minimum Deformation Averaging for Single-Subject FMRI at Ultra-High Field. ISMRM, Honolulu, 22-27 April 2017.
Kiran Thapaliya, S. Bollmann, V. Vegh and M. Barth (2017). Signal Compartments Mapped from Multi-Echo Gradient Recalled Echo Data Vary across the Corpus Callosum. ISMRM, Honolulu, 22-27 April 2017.
A 7T Human Brain Microstructure Atlas by Minimum Deformation Averaging at 300μm
Janke, Andrew L ., O'Brian, Kieran, Bollmann, Steffen, Kober, Tobias and Barth, Markus (2016). A 7T Human Brain Microstructure Atlas by Minimum Deformation Averaging at 300μm. International Society for Magnetic Resonance in Medicine, Singapore, 7-13 May 2016.
Contribution of cortical layer cytoarchitecture to quantitative susceptibility mapping
Sood, Surabhi, Urriola, Javier, Reutens, David C., Bollmann, Steffen, O'Brien, Kieran, Barth, Markus and Vegh, Viktor (2016). Contribution of cortical layer cytoarchitecture to quantitative susceptibility mapping. Organisation of the Human Brain Mapping, Geneva, Switzerland, 26-30 June, 2016.
Echo time based influences on quantitative susceptibility mapping
Sood, Surabhi, Urriola, Javier, Reutens, David C., Bollmann, Steffen, O'Brien, Kieran, Barth, Markus and Vegh, Viktor (2016). Echo time based influences on quantitative susceptibility mapping. International Symposium on Magnetic Resonance in Medicine, Singapore, May.
Selective combination of MRI phase images
Vegh, Viktor, O'Brien, Kieran, Reutens, David C., Bollmann, Steffen and Barth, Markus (2016). Selective combination of MRI phase images. International Symposium on Magnetic Resonance in Medicine, Singapore, 7-13 May, 2016.
When to perform channel combination in 7 Tesla quantitative susceptibility mapping?
Bollmann, Steffen, Zimmer, Fabian, O'Brien, Fabian, Vegh, Viktor and Barth, Markus (2015). When to perform channel combination in 7 Tesla quantitative susceptibility mapping?. Organization of the Human Brain Mapping, Hawaii Convention Centre, Honolulu, Hawaii, May.
Stewart, Ashley Wilton, Goodwin, Jonathan, Richardson, Matthew, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Barth, Markus and Bollmann, Steffen (2023). Deep-learning-enabled differentiation between intraprostatic gold fiducial markers and calcification in quantitative susceptibility mapping.
Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017). GRE and QSM average 7T model. The University of Queensland. (Dataset) doi: 10.14264/uql.2017.178
MP2RAGE T1-weighted average 7T model
Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017). MP2RAGE T1-weighted average 7T model. The University of Queensland. (Dataset) doi: 10.14264/uql.2017.266
Turbo Spin Echo average 7T model
Bollmann, Steffen, Janke, Andrew, Marstaller, Lars, Reutens, David, O'Brien, Kieran and Barth, Markus (2017). Turbo Spin Echo average 7T model. The University of Queensland. (Dataset) doi: 10.14264/uql.2017.267
Robust, valid and interpretable deep learning for quantitative imaging
(2022–2025) ARC Linkage Projects
Linking human brain structure to function with ultra-high resolution fMRI
(2020–2023) ARC Discovery Projects
National Imaging Facility Queensland Node (RICF Funds)
(2019–2023) Queensland Government Department of Environment and Science
ARC Training Centre for Innovation in Biomedical Imaging Technology
(2017–2024) ARC Industrial Transformation Training Centres
(2016–2023) NHMRC-NIH BRAIN Initiative Collaborative Research Grants
ACRF Facility for Molecular Imaging Agents in Cancer (AFMIAC)
(2015–2022) Australian Cancer Research Foundation
(2015–2022) ARC Future Fellowships
(2015–2019) Siemens Ltd
High-resolution brain imaging of basal ganglia function
(2015–2018) NHMRC Project Grant
(2014–2018) Siemens Ltd
Development of a framework for quality assurance and quality control for magnetic resonance and molecular imaging modalities
Doctor Philosophy — Principal Advisor
Other advisors:
Validation of Quantitative Susceptibility Mapping (QSM) in Magnetic Resonance Imaging
Doctor Philosophy — Principal Advisor
Other advisors:
Magnetic Resonance Spectroscopy in Patients with Motor Neuron Disease at 3T and 7T
Doctor Philosophy — Principal Advisor
Other advisors:
Development of a deep learning framework for multi-modal medical imaging
Doctor Philosophy — Principal Advisor
Other advisors:
Optimizing Radiofrequency Pulses for Parallel Transmit Systems at Ultra-High Field MRI
Doctor Philosophy — Principal Advisor
Other advisors:
Efficient Image Representations for Compressed Sensing MRI
Doctor Philosophy — Associate Advisor
Other advisors:
Additive manufacturing in the patient specific optimisation of intracavitary brachytherapy
Doctor Philosophy — Associate Advisor
Other advisors:
Improving functional MRI through Modelling and Imaging Microvascular Dynamics
(2023) Doctor Philosophy — Principal Advisor
Other advisors:
Modelling the Depth-dependent Functional Responses in Human Primary Visual and Motor Cortices
(2022) Doctor Philosophy — Principal Advisor
Other advisors:
Sequence Development to Improve Image Quality for T2- and Diffusion Weighted Imaging at 7T
(2021) Doctor Philosophy — Principal Advisor
Other advisors:
MR signal modelling approaches to characterise tissue microstructure in in-vivo human brain
(2020) Doctor Philosophy — Principal Advisor
Other advisors:
Evaluating Acquisition Techniques for Functional Magnetic Resonance Imaging at Ultra-High Field
(2018) Doctor Philosophy — Principal Advisor
Radiofrequency safety and shimming near metal hip prostheses at high and ultra-high field MRI
(2019) Doctor Philosophy — Joint Principal Advisor
Other advisors:
Automated Quantitative Susceptibility Mapping for Clinical Applications
(2023) Doctor Philosophy — Associate Advisor
Other advisors:
Solving Quantitative Susceptibility Mapping using Deep Learning
(2023) Master Philosophy — Associate Advisor
Other advisors:
(2021) Doctor Philosophy — Associate Advisor
Other advisors:
Measuring tissue variations in the human brain using quantitative MRI
(2019) Doctor Philosophy — Associate Advisor
Other advisors:
Neural correlates of visual function in agenesis of the corpus callosum
(2018) Doctor Philosophy — Associate Advisor
Other advisors: