The University of Queensland

Generation of loss-of-function mutants for wheat rust disease resistance gene cloning

Mago, Rohit, Till, Bradley, Periyannan, Sambasivam, Yu, Guotai, Wulff, Brande B. H. and Lagudah, Evans (2017). Generation of loss-of-function mutants for wheat rust disease resistance gene cloning. In Sambasivam Periyannan (Ed.), Wheat rust diseases: methods and protocols (pp. 199-205) New York, NY, United States: Humana Press. doi:10.1007/978-1-4939-7249-4_17

Isolation of wheat genomic DNA for gene mapping and cloning

Yu, Guotai, Hatta, Asyraf, Periyannan, Sambasivam, Lagudah, Evans and Wulff, Brande B. H. (2017). Isolation of wheat genomic DNA for gene mapping and cloning. In Sambasivam Periyannan (Ed.), Wheat rust diseases: methods and protocols (pp. 207-213) New York, NY, United States: Humana Press. doi:10.1007/978-1-4939-7249-4_18

Preface

Periyannan, Sambasivam (2017). Preface. Wheat rust diseases: methods and protocols. (pp. V-V) edited by Sambasivam Periyannan. New York, NY, United States: Humana Press. doi: 10.1007/978-1-4939-7249-4

A pathogen-induced putative NAC transcription factor mediates leaf rust resistance in barley

Chen, Chunhong, Jost, Matthias, Outram, Megan A., Friendship, Dorian, Chen, Jian, Wang, Aihua, Periyannan, Sambasivam, Bartoš, Jan, Holušová, Kateřina, Doležel, Jaroslav, Zhang, Peng, Bhatt, Dhara, Singh, Davinder, Lagudah, Evans, Park, Robert F. and Dracatos, Peter M. (2023). A pathogen-induced putative NAC transcription factor mediates leaf rust resistance in barley. Nature Communications, 14 (1) 5468. doi: 10.1038/s41467-023-41021-2

Editorial: Plant genetic and genomic resources for sustained crop improvement

Rangan, Parimalan, Henry, Robert, Wambugu, Peterson and Periyannan, Sambasivam (2023). Editorial: Plant genetic and genomic resources for sustained crop improvement. Frontiers in Plant Science, 14. doi: 10.3389/fpls.2023.1266698

The Keys to Controlling Wheat Rusts: Identification and Deployment of Genetic Resistance

Norman, Michael, Bariana, Harbans, Bansal, Urmil and Periyannan, Sambasivam (2023). The Keys to Controlling Wheat Rusts: Identification and Deployment of Genetic Resistance. Phytopathology®, 113 (4), 667-677. doi: 10.1094/phyto-02-23-0041-ia

Editorial: Advances in crop resistance breeding using modern genomic tools

Huang, Lin, Li, Yinghui, Chen, Shisheng, Periyannan, Sambasivam and Fahima, Tzion (2023). Editorial: Advances in crop resistance breeding using modern genomic tools. Frontiers in Plant Science, 14 1143689, 1-3. doi: 10.3389/fpls.2023.1143689

Harnessing adult-plant resistance genes to deploy durable disease resistance in crops

Dinglasan, Eric, Periyannan, Sambasivam and Hickey, Lee T. (2022). Harnessing adult-plant resistance genes to deploy durable disease resistance in crops. Essays in Biochemistry, 66 (5), 571-580. doi: 10.1042/ebc20210096

Haplotype variants of the stripe rust resistance gene Yr28 in Aegilops tauschii

Athiyannan, Naveenkumar, Zhang, Peng, McIntosh, Robert, Chakraborty, Soma, Hewitt, Timothy, Bhatt, Dhara, Forrest, Kerrie, Upadhyaya, Narayana, Steuernagel, Burkard, Arora, Sanu, Huerta, Julio, Hayden, Mathew, Wulff, Brande B. H., Ayliffe, Michael, Hickey, Lee T., Lagudah, Evans and Periyannan, Sambasivam (2022). Haplotype variants of the stripe rust resistance gene Yr28 in Aegilops tauschii. Theoretical and Applied Genetics, 135 (12), 4327-4336. doi: 10.1007/s00122-022-04221-w

Haplotype variants of Sr46 in Aegilops tauschii, the diploid D genome progenitor of wheat

Athiyannan, Naveenkumar, Long, Yunming, Kang, Houyang, Chandramohan, Sutha, Bhatt, Dhara, Zhang, Qijun, Klindworth, Daryl L., Rouse, Matthew N., Friesen, Timothy L., McIntosh, Robert, Zhang, Peng, Forrest, Kerrie, Hayden, Mathew, Patpour, Mehran, Hovmøller, Mogens S., Hickey, Lee T., Ayliffe, Michael, Cai, Xiwen, Lagudah, Evans S., Periyannan, Sambasivam and Xu, Steven S. (2022). Haplotype variants of Sr46 in Aegilops tauschii, the diploid D genome progenitor of wheat. Theoretical and Applied Genetics, 135 (8), 2627-2639. doi: 10.1007/s00122-022-04132-w

Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust

Jambuthenne, Dilani T., Riaz, Adnan, Athiyannan, Naveenkumar, Alahmad, Samir, Ng, Wei Ling, Ziems, Laura, Afanasenko, Olga, Periyannan, Sambasivam K., Aitken, Elizabeth, Platz, Greg, Godwin, Ian, Voss-Fels, Kai P., Dinglasan, Eric and Hickey, Lee T. (2022). Mining the Vavilov wheat diversity panel for new sources of adult plant resistance to stripe rust. Theoretical and Applied Genetics, 135 (4), 1355-1373. doi: 10.1007/s00122-022-04037-8

A highly differentiated region of wheat chromosome 7AL encodes a Pm1a immune receptor that recognizes its corresponding AvrPm1a effector from Blumeria graminis

Hewitt, Tim, Müller, Marion C., Molnár, István, Mascher, Martin, Holušová, Kateřina, Šimková, Hana, Kunz, Lukas, Zhang, Jianping, Li, Jianbo, Bhatt, Dhara, Sharma, Raghvendra, Schudel, Seraina, Yu, Guotai, Steuernagel, Burkhard, Periyannan, Sambasivam, Wulff, Brande, Ayliffe, Mick, McIntosh, Robert, Keller, Beat, Lagudah, Evans and Zhang, Peng (2021). A highly differentiated region of wheat chromosome 7AL encodes a Pm1a immune receptor that recognizes its corresponding AvrPm1a effector from Blumeria graminis. New Phytologist, 229 (5), 2812-2826. doi: 10.1111/nph.17075

Extensive genetic variation at the sr22 wheat stem rust resistance gene locus in the grasses revealed through evolutionary genomics and functional analyses

Hatta, M. Asyraf Md., Ghosh, Sreya, Athiyannan, Naveenkumar, Richardson, Terese, Steuernagel, Burkhard, Yu, Guotai, Rouse, Matthew N., Ayliffe, Michael, Lagudah, Evans S., Radhakrishnan, Guru V., Periyannan, Sambasivam K. and Wulff, Brande B. H. (2020). Extensive genetic variation at the sr22 wheat stem rust resistance gene locus in the grasses revealed through evolutionary genomics and functional analyses. Molecular Plant-Microbe Interactions, 33 (11), 1286-1298. doi: 10.1094/MPMI-01-20-0018-R

Resistance gene cloning from a wild crop relative by sequence capture and association genetics

Arora, Sanu, Steuernagel, Burkhard, Gaurav, Kumar, Chandramohan, Sutha, Long, Yunming, Matny, Oadi, Johnson, Ryan, Enk, Jacob, Periyannan, Sambasivam, Singh, Narinder, Asyraf Md Hatta, M., Athiyannan, Naveenkumar, Cheema, Jitender, Yu, Guotai, Kangara, Ngonidzashe, Ghosh, Sreya, Szabo, Les J., Poland, Jesse, Bariana, Harbans, Jones, Jonathan D. G., Bentley, Alison R., Ayliffe, Mick, Olson, Eric, Xu, Steven S., Steffenson, Brian J., Lagudah, Evans and Wulff, Brande B. H. (2019). Resistance gene cloning from a wild crop relative by sequence capture and association genetics. Nature Biotechnology, 37 (2), 139-143. doi: 10.1038/s41587-018-0007-9

Sustaining global agriculture through rapid detection and deployment of genetic resistance to deadly crop diseases

Periyannan, Sambasivam (2017). Sustaining global agriculture through rapid detection and deployment of genetic resistance to deadly crop diseases. New Phytologist, 219 (1), 45-51. doi: 10.1111/nph.14928

Unlocking new alleles for leaf rust resistance in the Vavilov wheat collection

Riaz, Adnan, Athiyannan, Naveenkumar, Periyannan, Sambasivam K., Afanasenko, Olga, Mitrofanova, Olga P., Platz, Gregory J., Aitken, Elizabeth A. B., Snowdon, Rod J., Lagudah, Evans S., Hickey, Lee T. and Voss-Fels, Kai P. (2017). Unlocking new alleles for leaf rust resistance in the Vavilov wheat collection. TAG. Theoretical and Applied Genetics, 131 (1), 127-144. doi: 10.1007/s00122-017-2990-5

Mining Vavilov’s treasure chest of wheat diversity for adult plant resistance to Puccinia triticina

Riaz, Adnan, Athiyannan, Naveenkumar, Periyannan, Sambasivam, Afanasenko, Olga, Mitrofanova, Olga, Aitken, Elizabeth A. B., Lagudah, Evans and Hickey, Lee T. (2017). Mining Vavilov’s treasure chest of wheat diversity for adult plant resistance to Puccinia triticina. Plant Disease, 101 (2), 317-323. doi: 10.1094/PDIS-05-16-0614-RE

Cytosolic activation of cell death and stem rust resistance by cereal MLA-family CC-NLR proteins

Cesari, Stella, Moore, John, Chen, Chunhong, Webb, Daryl, Periyannan, Sambasivam, Mago, Rohit, Bernoux, Maud, Lagudah, Evans S. and Dodds, Peter N. (2016). Cytosolic activation of cell death and stem rust resistance by cereal MLA-family CC-NLR proteins. Proceedings of the National Academy of Sciences, 113 (36), 10204-10209. doi: 10.1073/pnas.1605483113

Rapid cloning of disease-resistance genes in plants using mutagenesis and sequence capture

Steuernage, Burkhard, Periyannan, Sambasivam K., Hernandez-Pinzon, Inmaculada, Witek, Kamil, Rouse, Matthew N., Yu, Guotai, Hatta, Asyraf, Ayliffe, Mick, Bariana, Harbans, Jones, Jonathan D. G., Lagudah, Evans S. and Wulff, Brande B. H. (2016). Rapid cloning of disease-resistance genes in plants using mutagenesis and sequence capture. Nature Biotechnology, 34 (6), 652-655. doi: 10.1038/nbt.3543

A rapid phenotyping method for adult plant resistance to leaf rust in wheat

Riaz, Adnan, Periyannan, Sambasivam, Aitken, Elizabeth and Hickey, Lee (2016). A rapid phenotyping method for adult plant resistance to leaf rust in wheat. Plant Methods, 12 (17) 17, 1-10. doi: 10.1186/s13007-016-0117-7

A recently evolved hexose transporter variant confers resistance to multiple pathogens in wheat

Moore, John W., Herrera-Foessel, Sybil, Lan, Caixia, Schnippenkoetter, Wendelin, Ayliffe, Michael, Huerta-Espino, Julio, Lillemo, Morten, Viccars, Libby, Milne, Ricky, Periyannan, Sambasivam, Kong, Xiuying, Spielmeyer, Wolfgang, Talbot, Mark, Bariana, Harbans, Patrick, John W., Dodds, Peter, Singh, Ravi and Lagudah, Evans (2015). A recently evolved hexose transporter variant confers resistance to multiple pathogens in wheat. Nature Genetics, 47 (12), 1494-1498. doi: 10.1038/ng.3439

The wheat Sr50 gene reveals rich diversity at a cereal disease resistance locus

Mago, Rohit, Zhang, Peng, Vautrin, Sonia, Simkova, Hana, Bansal, Urmil, Luo, Ming-Cheng, Rouse, Matthew, Karaoglu, Haydar, Periyannan, Sambasivam, Kolmer, James, Jin, Yue, Ayliffe, Michael A., Bariana, Harbans, Park, Robert F., McIntosh, Robert, Dolezel, Jaroslav, Berges, Helene, Spielmeyer, Wolfgang, Lagudah, Evans S., Ellis, Jeff G. and Dodds, Peter N. (2015). The wheat Sr50 gene reveals rich diversity at a cereal disease resistance locus. Nature Plants, 1 (12) 15186. doi: 10.1038/NPLANTS.2015.186

Identification of a robust molecular marker for the detection of the stem rust resistance gene Sr45 in common wheat

Periyannan, Sambasivam, Bansal, Urmil, Bariana, Harbans, Deal, Karin, Luo, Ming-Cheng, Dvorak, Jan and Lagudah, Evans (2014). Identification of a robust molecular marker for the detection of the stem rust resistance gene Sr45 in common wheat. Theoretical and Applied Genetics, 127 (4), 947-955. doi: 10.1007/s00122-014-2270-6

Development and validation of molecular markers linked with stem rust resistance gene Sr13 in durum wheat

Periyannan, Sambasivam K., Qamar, Zia U., Bansal, Urmil K. and Bariana, Harbans S. (2014). Development and validation of molecular markers linked with stem rust resistance gene Sr13 in durum wheat. Crop & Pasture Science, 65 (1), 74-79. doi: 10.1071/CP13325

The gene Sr33, an ortholog of barley Mla genes, encodes resistance to wheat stem rust race Ug99

Periyannan, Sambasivam, Moore, John, Ayliffe, Michael, Bansal, Urmil, Wang, Xiaojing, Huang, Li, Deal, Karin, Luo, Mingcheng, Kong, Xiuying, Bariana, Harbans, Mago, Rohit, McIntosh, Robert, Dodds, Peter, Dvorak, Jan and Lagudah, Evans (2013). The gene Sr33, an ortholog of barley Mla genes, encodes resistance to wheat stem rust race Ug99. Science, 341 (6147), 786-788. doi: 10.1126/science.1239028

A simple method for comparing fungal biomass in infected plant tissues

Ayliffe, Michael, Periyannan, Sambasivam K., Feechan, Angela, Dry, Ian, Schumann, Ulrike, Wang, Ming-Bo, Pryor, Anthony and Lagudah, Evans (2013). A simple method for comparing fungal biomass in infected plant tissues. Molecular Plant-Microbe Interactions, 26 (6), 658-667. doi: 10.1094/MPMI-12-12-0291-R

Lr68: a new gene conferring slow rusting resistance to leaf rust in wheat

Herrera-Foessel, Sybil A., Singh, Ravi P., Huerta-Espino, Julio, Rosewarne, Garry M., Periyannan, Sambasivam K., Viccars, Libby, Calvo-Salazar, Violeta, Lan, Caixia and Lagudah, Evans S. (2012). Lr68: a new gene conferring slow rusting resistance to leaf rust in wheat. Theoretical and Applied Genetics, 124 (8), 1475-1486. doi: 10.1007/s00122-012-1802-1

A robust molecular marker for the detection of shortened introgressed segment carrying the stem rust resistance gene Sr22 in common wheat

Periyannan, Sambasivam K., Bansal, Urmil K., Bariana, Harbans S., Pumphrey, Michael and Lagudah, Evans S. (2011). A robust molecular marker for the detection of shortened introgressed segment carrying the stem rust resistance gene Sr22 in common wheat. Theoretical and Applied Genetics, 122 (1), 1-7. doi: 10.1007/s00122-010-1417-3