The University of Queensland

Statistical and probabilistic approaches to predict protein abundance

Ali, Rubbiya A., Naqi, Ali, Ali, Sarah, Fatima, Mashal, Ishaq, Musarat and Mehdi, Ahmed M. (2019). Statistical and probabilistic approaches to predict protein abundance. Encyclopedia of Bioinformatics and Computational Biology. (pp. 847-854) edited by Shoba Ranganathan, Michael Gribskov, Kenta Nakai and Christian Schönbach. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-12-809633-8.20466-4

Environmental pathways affecting gene expression (E.PAGE) as an R package to predict gene–environment associations

Muralidharan, Sachin, Ali, Sarah, Yang, Lilin, Badshah, Joshua, Zahir, Syeda Farah, Ali, Rubbiya A., Chandra, Janin, Frazer, Ian H., Thomas, Ranjeny and Mehdi, Ahmed M. (2022). Environmental pathways affecting gene expression (E.PAGE) as an R package to predict gene–environment associations. Scientific Reports, 12 (1) 18710, 1-19. doi: 10.1038/s41598-022-21988-6

Structure of a PSI-LHCI-cyt b6f supercomplex in Chlamydomonas reinhardtii promoting cyclic electron flow under anaerobic conditions

Steinbeck, Janina, Ross, Ian L., Rothnagel, Rosalba, Gaebelein, Philipp, Schulze, Stefan, Giles, Nichole, Ali, Rubbiya, Drysdale, Rohan, Sierecki, Emma, Gambin, Yann, Stahlberg, Henning, Takahashi, Yuichiro, Hippler, Michael and Hankamer, Ben (2018). Structure of a PSI-LHCI-cyt b6f supercomplex in Chlamydomonas reinhardtii promoting cyclic electron flow under anaerobic conditions. Proceedings of the National Academy of Sciences, 115 (41), 10517-10522. doi: 10.1073/pnas.1809973115

RAZA: A Rapid 3D z-crossings algorithm to segment electron tomograms and extract organelles and macromolecules

Ali, Rubbiya A., Mehdi, Ahmed M., Rothnagel, Rosalba, Hamilton, Nicholas A., Gerle, Christoph, Landsberg, Michael J. and Hankamer, Ben (2017). RAZA: A Rapid 3D z-crossings algorithm to segment electron tomograms and extract organelles and macromolecules. Journal of Structural Biology, 200 (2), 73-86. doi: 10.1016/j.jsb.2017.10.002

A 3D image filter for parameter-free segmentation of macromolecular structures from electron tomograms

Ali, Rubbiya A., Landsberg, Michael J., Knauth, Emily, Morgan, Garry P., Marsh, Brad J. and Hankamer, Ben (2012). A 3D image filter for parameter-free segmentation of macromolecular structures from electron tomograms. Plos One, 7 (3) e33697, e33697-1-e33697-12. doi: 10.1371/journal.pone.0033697

GK based fuzzy clustering for the diagnosis of cardiac arrhythmia

Mehdi, Ahmed M., Zayegh, Aladin, Begg, Rezaul and Ali, Rubbiya (2010). GK based fuzzy clustering for the diagnosis of cardiac arrhythmia. International Journal of Computational Intelligence and Applications, 9 (2), 105-123. doi: 10.1142/S146902681000280X

A novel approach of harmonic analysis in power distribution networks using artificial intelligence

Paracha, Zahir J., Kalam, Akhtar and Ali, Rubbiya (2009). A novel approach of harmonic analysis in power distribution networks using artificial intelligence. doi: 10.1109/ICICT.2009.5267198

E.PAGE: A curated database and enrichment tool to predict gene modules associated with gene-environment interactions

Muralidharan, Sachin, Ali, Sarah, Yang, Lilin, Badshah, Joshua, Zahir, Farah, Ali, Rubbiya, Chandra, Janin, Thomas, Ranjeny and Mehdi, Ahmed M. (2022). E.PAGE: A curated database and enrichment tool to predict gene modules associated with gene-environment interactions.

Developing 3D novel edge detection and particle picking tools for electron tomography

Ali, Rubbiya Akram (2016). Developing 3D novel edge detection and particle picking tools for electron tomography. PhD Thesis, Institute for Molecular Bioscience, The University of Queensland. doi: 10.14264/uql.2016.334