Journal Article: Impaired signaling for neuromuscular synaptic maintenance is a feature of Motor Neuron Disease
Ding, Qiao, Kesavan, Kaamini, Lee, Kah Meng, Wimberger, Elyse, Robertson, Thomas, Gill, Melinder, Power, Dominique, Chang, Jeryn, Fard, Atefeh T., Mar, Jessica C., Henderson, Robert D., Heggie, Susan, McCombe, Pamela A., Jeffree, Rosalind L., Colditz, Michael J., Hilliard, Massimo A., Ng, Dominic C. H., Steyn, Frederik J., Phillips, William D., Wolvetang, Ernst J., Ngo, Shyuan T. and Noakes, Peter G. (2022). Impaired signaling for neuromuscular synaptic maintenance is a feature of Motor Neuron Disease. Acta Neuropathologica Communications, 10 (1) 61, 61. doi: 10.1186/s40478-022-01360-5
Journal Article: Redox signaling by glutathione peroxidase 2 links vascular modulation to metabolic plasticity of breast cancer
Ren, Zuen, Liang, Huizhi, Galbo, Phillip M., Dharmaratne, Malindrie, Kulkarni, Ameya S., Fard, Atefeh Taherian, Aoun, Marie Louise, Martinez-Lopez, Nuria, Suyama, Kimita, Benard, Outhiriaradjou, Zheng, Wei, Liu, Yang, Albanese, Joseph, Zheng, Deyou, Mar, Jessica C., Singh, Rajat, Prystowsky, Michael B., Norton, Larry and Hazan, Rachel B. (2022). Redox signaling by glutathione peroxidase 2 links vascular modulation to metabolic plasticity of breast cancer. Proceedings of the National Academy of Sciences, 119 (8) e2107266119. doi: 10.1073/pnas.2107266119
Journal Article: Computational methods for single-cell imaging and omics data integration
Watson, Ebony Rose, Taherian Fard, Atefeh and Mar, Jessica Cara (2022). Computational methods for single-cell imaging and omics data integration. Frontiers in Molecular Biosciences, 8 768106, 768106. doi: 10.3389/fmolb.2021.768106
Exemplification of new and safer gene editing tools for cultured meat production in Australia
(2021–2022) UQ Knowledge Exchange & Translation Fund
Investigating the Impact of Sex-based Dimorphism in the Omics of Human Disease
Doctor Philosophy
Investigating mechanisms of human aging using single cell bioinformatics and stem cell models.
Doctor Philosophy
Developing bioinformatics methods for single cell sequencing data to understand human disease.
Doctor Philosophy
Quantitative modelling of the Waddington epigenetic landscape
Taherian Fard, Atefeh and Ragan, Mark A. (2019). Quantitative modelling of the Waddington epigenetic landscape. Computational stem cell biology: methods and protocols. (pp. 157-171) edited by Patrick Cahan. New York, United States: Humana Press. doi: 10.1007/978-1-4939-9224-9_7
Impaired signaling for neuromuscular synaptic maintenance is a feature of Motor Neuron Disease
Ding, Qiao, Kesavan, Kaamini, Lee, Kah Meng, Wimberger, Elyse, Robertson, Thomas, Gill, Melinder, Power, Dominique, Chang, Jeryn, Fard, Atefeh T., Mar, Jessica C., Henderson, Robert D., Heggie, Susan, McCombe, Pamela A., Jeffree, Rosalind L., Colditz, Michael J., Hilliard, Massimo A., Ng, Dominic C. H., Steyn, Frederik J., Phillips, William D., Wolvetang, Ernst J., Ngo, Shyuan T. and Noakes, Peter G. (2022). Impaired signaling for neuromuscular synaptic maintenance is a feature of Motor Neuron Disease. Acta Neuropathologica Communications, 10 (1) 61, 61. doi: 10.1186/s40478-022-01360-5
Ren, Zuen, Liang, Huizhi, Galbo, Phillip M., Dharmaratne, Malindrie, Kulkarni, Ameya S., Fard, Atefeh Taherian, Aoun, Marie Louise, Martinez-Lopez, Nuria, Suyama, Kimita, Benard, Outhiriaradjou, Zheng, Wei, Liu, Yang, Albanese, Joseph, Zheng, Deyou, Mar, Jessica C., Singh, Rajat, Prystowsky, Michael B., Norton, Larry and Hazan, Rachel B. (2022). Redox signaling by glutathione peroxidase 2 links vascular modulation to metabolic plasticity of breast cancer. Proceedings of the National Academy of Sciences, 119 (8) e2107266119. doi: 10.1073/pnas.2107266119
Computational methods for single-cell imaging and omics data integration
Watson, Ebony Rose, Taherian Fard, Atefeh and Mar, Jessica Cara (2022). Computational methods for single-cell imaging and omics data integration. Frontiers in Molecular Biosciences, 8 768106, 768106. doi: 10.3389/fmolb.2021.768106
Leptin antagonism inhibits prostate cancer xenograft growth and progression
Philp, Lisa K., Rockstroh, Anja, Sadowski, Martin C., Taherian Fard, Atefeh, Lehman, Melanie, Tevz, Gregor, Libério, Michelle S., Bidgood, Charles L., Gunter, Jennifer H., McPherson, Stephen, Bartonicek, Nenad, Wade, John D., Otvos, Laszlo and Nelson, Colleen C. (2021). Leptin antagonism inhibits prostate cancer xenograft growth and progression. Endocrine-Related Cancer, 28 (5), 353-375. doi: 10.1530/erc-20-0405
Adolphe, Christelle, Xue, Angli, Fard, Atefeh Taherian, Genovesi, Laura A., Yang, Jian and Wainwright, Brandon J. (2021). Genetic and functional interaction network analysis reveals global enrichment of regulatory T cell genes influencing basal cell carcinoma susceptibility. Genome Medicine, 13 (1) 19, 19. doi: 10.1186/s13073-021-00827-9
Therapy-induced lipid uptake and remodeling underpin ferroptosis hypersensitivity in prostate cancer
Tousignant, Kaylyn D., Rockstroh, Anja, Poad, Berwyck L. J., Talebi, Ali, Young, Reuben S. E., Fard, Atefeh Taherian, Gupta, Rajesh, Zang, Tuo, Wang, Chenwei, Lehman, Melanie L., Swinnen, Johan, Blanksby, Stephen J., Nelson, Colleen C. and Sadowski, Martin C. (2020). Therapy-induced lipid uptake and remodeling underpin ferroptosis hypersensitivity in prostate cancer. Cancer & Metabolism, 8 (1) 11. doi: 10.1186/s40170-020-00217-6
Tousignant, Kaylyn D., Rockstroh, Anja, Fard, Atefeh Taherian, Lehman, Melanie L., Wang, Chenwei, McPherson, Stephen J., Philp, Lisa K., Bartonicek, Nenad, Dinger, Marcel E., Nelson, Colleen C. and Sadowski, Martin C. (2019). Lipid uptake is an androgen-enhanced lipid supply pathway associated with prostate cancer disease progression and bone metastasis. Molecular Cancer Research, 17 (5), 1166-1179. doi: 10.1158/1541-7786.MCR-18-1147
Stylianou, Nataly, Lehman, Melanie L., Wang, Chenwei, Fard, Atefeh Taherian, Rockstroh, Anja, Fazli, Ladan, Jovanovic, Lidija, Ward, Micheal, Sadowski, Martin C., Kashyap, Abhishek S., Buttyan, Ralph, Gleave, Martin E., Westbrook, Thomas F., Williams, Elizabeth D., Gunter, Jennifer H., Nelson, Colleen C. and Hollier, Brett G. (2019). A molecular portrait of epithelial-mesenchymal plasticity in prostate cancer associated with clinical outcome (vol 38, pg 913, 2019). Oncogene, 38 (13), 2436-2436. doi: 10.1038/s41388-018-0587-3
Stylianou, Nataly, Lehman, Melanie L., Wang, Chenwei, Fard, Atefeh Taherian, Rockstroh, Anja, Fazli, Ladan, Jovanovic, Lidija, Ward, Micheal, Sadowski, Martin C., Kashyap, Abhishek S., Buttyan, Ralph, Gleave, Martin E., Westbrook, Thomas F., Williams, Elizabeth D., Gunter, Jennifer H., Nelson, Colleen C. and Hollier, Brett G. (2018). A molecular portrait of epithelial–mesenchymal plasticity in prostate cancer associated with clinical outcome. Oncogene, 38 (7), 913-934. doi: 10.1038/s41388-018-0488-5
Modeling the attractor landscape of disease progression: a network-based approach
Taherian Fard, Atefeh and Ragan, Mark A. (2017). Modeling the attractor landscape of disease progression: a network-based approach. Frontiers in Genetics, 8 (APR) 48, 48. doi: 10.3389/fgene.2017.00048
Taherian Fard, Atefeh, Srihari, Sriganesh, Mar, Jessica C. and Ragan, Mark A. (2016). Not just a colourful metaphor: modelling the landscape of cellular development using Hopfield networks. NPJ Systems Biology and Applications, 2 (1) 16001, 16001. doi: 10.1038/npjsba.2016.1
Breast cancer classification: linking molecular mechanisms to disease prognosis
Taherian-Fard, Atefeh, Srihari, Sriganesh and Ragan, Mark A. (2014). Breast cancer classification: linking molecular mechanisms to disease prognosis. Briefings in Bioinformatics, 16 (3) bbu020, 461-474. doi: 10.1093/bib/bbu020
Hoque, Md. Aminul, Fard, Atefeh Taherian, Rahman, Mosfequr, Alattas, Omar, Akazawa, Kohei and Merican, Amir Feisal (2011). Comparison of dynamic responses of cellular metabolites in Escherichia coli to pulse addition of substrates. Biologia, 66 (6) 954, 954-966. doi: 10.2478/s11756-011-0136-9
Comparative analysis of organophosphate degrading enzymes from diverse species
Salman, Amna, Taherian Fard, Atefeh, Nasir, Arshan and Bokhari, Habib (2010). Comparative analysis of organophosphate degrading enzymes from diverse species. Bioinformation, 5 (2), 67-72.
Comparative analysis of organophosphate degrading enzymes from diverse species
Salman, Amna, Fard, Atefeh Taherian, Nasir, Arshan and Bokhari, Habib (2010). Comparative analysis of organophosphate degrading enzymes from diverse species. Bioinformation, 5 (2), 67-72. doi: 10.6026/97320630005067
Fard, Atefeh Taherian, Salman, Amna, Kazemi, Bahram and Bokhari, Habib (2009). In silico comparative genome analysis of malaria parasite Plasmodium falciparum and Plasmodium vivax chromosome 4. Parasitology Research, 104 (6), 1361-1364. doi: 10.1007/s00436-009-1338-8
Ren, Zuen, Dharmaratne, Malindrie, Kulkarni, Ameya, Fard, Atefeh Taherian, Mar, Jessica, Galbo, Phillip M., Liu, Yang, Zheng, Deyou, Liang, Huizhi, Benard, Outhiriaradjou, Suyama, Kimita, Prystowsky, Michael B., Norton, Larry and Hazan, Rachel B. (2020). Redox regulation of tumor cell heterogeneity in the PyMT mammary tumor model revealed by single cell RNA sequencing. AACR Annual Meeting, Online, 22-24 June, 2020. Philadelphia, PA, United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2020-4426
Ngo, Shyuan, Power, Dominique, Andersen, Stacey, Taherian Fard, Atefeh, Chang, Jeryn and Steyn, Frederik (2022). snrRNA-seq_muscle_dataset. The University of Queensland. (Dataset) doi: 10.48610/0106c8e
Modelling the landscape of cellular development and disease
Taherian Fard, Atefeh (2016). Modelling the landscape of cellular development and disease. PhD Thesis, Institute for Molecular Bioscience, The University of Queensland. doi: 10.14264/uql.2016.1009
Exemplification of new and safer gene editing tools for cultured meat production in Australia
(2021–2022) UQ Knowledge Exchange & Translation Fund
Investigating the Impact of Sex-based Dimorphism in the Omics of Human Disease
Doctor Philosophy — Associate Advisor
Other advisors:
Investigating mechanisms of human aging using single cell bioinformatics and stem cell models.
Doctor Philosophy — Associate Advisor
Other advisors:
Developing bioinformatics methods for single cell sequencing data to understand human disease.
Doctor Philosophy — Associate Advisor
Other advisors:
Developing novel statistical methods for the analysis of single cell next-generation sequencing data.
Doctor Philosophy — Associate Advisor
Other advisors:
Resolving heterogeneity in stem cells by developing bioinformatic models for single cell next-generation sequencing datasets.
Doctor Philosophy — Associate Advisor
Other advisors: