The University of Queensland

Signatures of negative selection in the genetic architecture of human complex traits

Zeng, Jian, de Vlaming, Ronald, Wu, Yang, Robinson, Matthew R., Lloyd-Jones, Luke R., Yengo, Loic, Yap, Chloe X., Xue, Angli, Sidorenko, Julia, McRae, Allan F., Powell, Joseph E., Montgomery, Grant W., Metspalu, Andres, Esko, Tonu, Gibson, Greg, Wray, Naomi R., Visscher, Peter M. and Yang, Jian (2018) Signatures of negative selection in the genetic architecture of human complex traits. Nature Genetics, 50 5: 746-753. doi:10.1038/s41588-018-0101-4

Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets

Zhu, Zhihong, Zhang, Futao, Hu, Han, Bakshi, Andrew, Robinson, Matthew R., Powell, Joseph E., Montgomery,Grant W., Goddard, Michael E., Wray, Naomi R., Visscher, Peter M. and Yang, Jian (2016) Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets. Nature Genetics, 48 5: 481-487. doi:10.1038/ng.3538

Common SNPs explain a large proportion of the heritability for human height

Yang, Jian, Benyamin, Beben, McEvoy, Brian P., Gordon, Scott, Henders, Anjali K., Nyholt, Dale R., Madden, Pamela A., Heath, Andrew C., Martin, Nicholas G., Montgomery, Grant W., Goddard, Michael E. and Visscher, Peter M. (2010) Common SNPs explain a large proportion of the heritability for human height. Nature Genetics, 42 7: 565-569. doi:10.1038/ng.608

Genome-wide complex trait analysis (GCTA): methods, data analyses, and interpretations

Yang, J., Lee, (Sang) Hong, Goddard, M. E. and Visscher, Peter (2013). Genome-wide complex trait analysis (GCTA): methods, data analyses, and interpretations. In Cedric Gondro, Julius van der Werf and Ben Hayes (Ed.), Genome-Wide Association Studies and Genomic Prediction (pp. 215-236) New York, NY U.S.A.: Humana Press. doi:10.1007/978-1-62703-447-0_9

Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences

Karlsson Linnér, Richard, , , Biroli, Pietro, Kong, Edward, Meddens, S. Fleur W., Wedow, Robbee, Fontana, Mark Alan, Lebreton, Maël, Tino, Stephen P., Abdellaoui, Abdel, Hammerschlag, Anke R., Nivard, Michel G., Okbay, Aysu, Rietveld, Cornelius A., Timshel, Pascal N., Trzaskowski, Maciej, Vlaming, Ronald de, Zünd, Christian L., Bao, Yanchun, Buzdugan, Laura, Caplin, Ann H., Chen, Chia-Yen, Eibich, Peter, Fontanillas, Pierre, Gonzalez, Juan R., Joshi, Peter K., Karhunen, Ville, Kleinman, Aaron, Levin, Remy Z., Lill, Christina M., Meddens, Gerardus A., Muntané, Gerard, Sanchez-Roige, Sandra, Rooij, Frank J. van, Taskesen, Erdogan, Wu, Yang, Zhang, Futao, Auton, Adam, Boardman, Jason D., Clark, David W., Conlin, Andrew, Dolan, Conor C., Fischbacher, Urs, Groenen, Patrick J. F., Harris, Kathleen Mullan, Hasler, Gregor, Hofman, Albert, Ikram, Mohammad A., Jain, Sonia, Karlsson, Robert, Kessler, Ronald C., Kooyman, Maarten, MacKillop, James, Männikkö, Minna, Morcillo-Suarez, Carlos, McQueen, Matthew B., Schmidt, Klaus M., Smart, Melissa C., Sutter, Matthias, Thurik, A. Roy, Uitterlinden, André G., White, Jon, Wit, Harriet de, Yang, Jian, Bertram, Lars, Boomsma, Dorret I., Esko, Tõnu, Fehr, Ernst, Hinds, David A., Johannesson, Magnus, Kumari, Meena, Laibson, David, Magnusson, Patrik K. E., Meyer, Michelle N., Navarro, Arcadi, Palmer, Abraham A., Pers, Tune H., Posthuma, Danielle, Schunk, Daniel, Stein, Murray B., Svento, Rauli, Tiemeier, Henning, Timmers, Paul R. H. J., Turley, Patrick, Ursano, Robert J., Wagner, Gert G., Wilson, James F., Gratten, Jacob, Lee, James J., Cesarini, David, Benjamin, Daniel J., Koellinger, Philipp D., Beauchamp, Jonathan P., , , , and , (2019) Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences. Nature Genetics, . doi:10.1038/s41588-018-0309-3

Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes

Lakhani, Chirag M., Tierney, Braden T., Manrai, Arjun K., Yang, Jian, Visscher, Peter M. and Patel, Chirag J. (2019) Repurposing large health insurance claims data to estimate genetic and environmental contributions in 560 phenotypes. Nature Genetics, . doi:10.1038/s41588-018-0313-7

Meta-analysis of genome-wide association studies for body fat distribution in 694 649 individuals of European ancestry

Pulit, Sara L., Stoneman, Charli, Morris, Andrew P., Wood, Andrew R., Glastonbury, Craig A., Tyrrell, Jessica, Yengo, Loïc, Ferreira, Teresa, Marouli, Eirini, Ji, Yingjie, Yang, Jian, Jones, Samuel, Beaumont, Robin, Croteau-Chonka, Damien C., Winkler, Thomas W., Consortium, Giant, Hattersley, Andrew T., Loos, Ruth J F, Hirschhorn, Joel N., Visscher, Peter M., Frayling, Timothy M., Yaghootkar, Hanieh and Lindgren, Cecilia M. (2019) Meta-analysis of genome-wide association studies for body fat distribution in 694 649 individuals of European ancestry. Human Molecular Genetics, 28 1: 166-174. doi:10.1093/hmg/ddy327

Dissection of genetic variation and evidence for pleiotropy in male pattern baldness

Yap, Chloe X., Sidorenko, Julia, Wu, Yang, Kemper, Kathryn E., Yang, Jian, Wray, Naomi R., Robinson, Matthew R. and Visscher, Peter M. (2018) Dissection of genetic variation and evidence for pleiotropy in male pattern baldness. Nature Communications, 9 1: 5407. doi:10.1038/s41467-018-07862-y

Identification of 55,000 replicated DNA methylation QTL

McRae, Allan F., Marioni, Riccardo E., Shah, Sonia, Yang, Jian, Powell, Joseph E., Harris, Sarah E., Gibson, Jude, Henders, Anjali K., Bowdler, Lisa, Painter, Jodie N., Murphy, Lee, Martin, Nicholas G., Starr, John M., Wray, Naomi R., Deary, Ian J., Visscher, Peter M. and Montgomery, Grant W. (2018) Identification of 55,000 replicated DNA methylation QTL. Scientific Reports, 8 1: . doi:10.1038/s41598-018-35871-w

Genome-wide interaction study of a proxy for stress-sensitivity and its prediction of major depressive disorder

Arnau-Soler, Aleix, Adams, Mark J., Hayward, Caroline, Thomson, Pippa A., Porteous, David, Campbell, Archie, Smith, Blair H., Black, Corri, Padmanabhan, Sandosh, McIntosh, Andrew, Wray, Naomi R., Ripke, Stephan, Mattheisen, Manuel, Trzaskowski, Maciej, Byrne, Enda M., Abdellaoui, Abdel, Agerbo, Esben, Air, Tracy M., Andlauer, Till F.M., Bacanu, Silviu-Alin, Bækvad-Hansen, Marie, Beekman, Aartjan T.F., Bigdeli, Tim B., Binder, Elisabeth B., Blackwood, Douglas H.R., Bryois, Julien, Buttenschøn, Henriette N., Bybjerg-Grauholm, Jonas, Cai, Na, Castelao, Enrique, Christensen, Jane Hvarregaard, Clarke, Toni-Kim, Coleman, Jonathan R.I., Colodro-Conde, Lucía, Couvy-Duchesne, Baptiste, Craddock, Nick, Crawford, Gregory E., Davies, Gail, Deary, Ian J., Degenhardt, Franziska, Derks, Eske M., Direk, Nese, Dolan, Conor V., Dunn, Erin C., Eley, Thalia C., Escott-Price, Valentina, Kiadeh, Farnush Farhadi Hassan, Finucane, Hilary K., Forstner, Andreas J., Frank, Josef, Gaspar, Héléna A., Gill, Michael, Goes, Fernando S., Gordon, Scott D., Grove, Jakob, Hall, Lynsey S., Hansen, Christine Søholm, Hansen, Thomas F., Herms, Stefan, Hickie, Ian B., Hoffmann, Per, Homuth, Georg, Horn, Carsten, Hottenga, Jouke-Jan, Hougaard, David M., Ising, Marcus, Jansen, Rick, Jorgenson, Eric, Knowles, James A., Kohane, Isaac S., Kraft, Julia, Kretzschmar, Warren W., Krogh, Jesper, Kutalik, Zoltán, Li, Yihan, Lind, Penelope A., MacIntyre, Donald J., MacKinnon, Dean F., Maier, Robert M., Maier, Wolfgang, Marchini, Jonathan, Mbarek, Hamdi, McGrath, Patrick, McGuffin, Peter, Medland, Sarah E., Mehta, Divya, Middeldorp, Christel M., Mihailov, Evelin, Milaneschi, Yuri, Milani, Lili, Mondimore, Francis M., Montgomery, Grant W., Mostafavi, Sara, Mullins, Niamh, Nauck, Matthias, Ng, Bernard, Nivard, Michel G., Nyholt, Dale R., O'Reilly, Paul F., Oskarsson, Hogni, Owen, Michael J., Painter, Jodie N., Pedersen, Carsten Bøcker, Pedersen, Marianne Giørtz, Peterson, Roseann E., Pettersson, Erik, Peyrot, Wouter J., Pistis, Giorgio, Posthuma, Danielle, Quiroz, Jorge A., Qvist, Per, Rice, John P., Riley, Brien P., Rivera, Margarita, Mirza, Saira Saeed, Schoevers, Robert, Schulte, Eva C., Shen, Ling, Shi, Jianxin, Shyn, Stanley I., Sigurdsson, Engilbert, Sinnamon, Grant C.B., Smit, Johannes H., Smith, Daniel J., Stefansson, Hreinn, Steinberg, Stacy, Streit, Fabian, Strohmaier, Jana, Tansey, Katherine E., Teismann, Henning, Teumer, Alexander, Thompson, Wesley, Thorgeirsson, Thorgeir E., Traylor, Matthew, Treutlein, Jens, Trubetskoy, Vassily, Uitterlinden, André G., Umbricht, Daniel, Van Der Auwera, Sandra, Van Hemert, Albert M., Viktorin, Alexander, Visscher, Peter M., Wang, Yunpeng, Webb, Bradley T., Weinsheimer, Shantel Marie, Wellmann, Jürgen, Willemsen, Gonneke, Witt, Stephanie H., Wu, Yang, Xi, Hualin S., Yang, Jian, Zhang, Futao, Arolt, Volker, Baune, Bernhard T., Berger, Klaus, Boomsma, Dorret I., Cichon, Sven, Dannlowski, Udo, De Geus, E. J.C., DePaulo, J. Raymond, Domenici, Enrico, Domschke, Katharina, Esko, Tõnu, Grabe, Hans J., Hamilton, Steven P., Heath, Andrew C., Kendler, Kenneth S., Kloiber, Stefan, Lewis, Glyn, Li, Qingqin S., Lucae, Susanne, Madden, Pamela A.F., Magnusson, Patrik K., Martin, Nicholas G., McIntosh, Andrew M., Metspalu, Andres, Mors, Ole, Mortensen, Preben Bo, Müller-Myhsok, Bertram, Nordentoft, Merete, Nöthen, Markus M., O'Donovan, Michael C., Paciga, Sara A., Pedersen, Nancy L., Penninx, Brenda W.J.H., Perlis, Roy H., Porteous, David J., Potash, James B., Preisig, Martin, Rietschel, Marcella, Schaefer, Catherine, Schulze, Thomas G., Smoller, Jordan W., Stefansson, Kari, Tiemeier, Henning, Uher, Rudolf, Völzke, Henry, Weissman, Myrna M., Werge, Thomas, Lewis, Cathryn M., Levinson, Douglas F., Breen, Gerome, Børglum, Anders D. and Sullivan, Patrick F. (2018) Genome-wide interaction study of a proxy for stress-sensitivity and its prediction of major depressive disorder. PLoS ONE, 13 12: . doi:10.1371/journal.pone.0209160

Leveraging GWAS for complex traits to detect signatures of natural selection in humans

Guo, Jing, Yang, Jian and Visscher, Peter M. (2018) Leveraging GWAS for complex traits to detect signatures of natural selection in humans. Current Opinion in Genetics and Development, 53 9-14. doi:10.1016/j.gde.2018.05.012

Imprint of assortative mating on the human genome

Yengo, Loic, Robinson, Matthew R., Keller, Matthew C., Kemper, Kathryn E., Yang, Yuanhao, Trzaskowski, Maciej, Gratten, Jacob, Turley, Patrick, Cesarini, David, Benjamin, Daniel J., Wray, Naomi R., Goddard, Michael E., Yang, Jian and Visscher, Peter M. (2018) Imprint of assortative mating on the human genome. Nature Human Behaviour, 2 12: 948-954. doi:10.1038/s41562-018-0476-3

Is schizophrenia a risk factor for breast cancer?—evidence from genetic data

Byrne, Enda M., Ferreira, Manuel A.R., Xue, Angli, Lindström, Sara, Jiang, Xia, Yang, Jian, Easton, Douglas F., Wray, Naomi R. and Chenevix-Trench, Georgia (2018) Is schizophrenia a risk factor for breast cancer?—evidence from genetic data. Schizophrenia Bulletin, . doi:10.1093/schbul/sby162

Meta-analysis of genome-wide association studies for height and body mass index in ∼700000 individuals of European ancestry

Yengo, Loic, Sidorenko, Julia, Kemper, Kathryn E., Zheng, Zhili, Wood, Andrew R., Weedon, Michael N., Frayling, Timothy M., Hirschhorn, Joel, Yang, Jian and Visscher, Peter M. (2018) Meta-analysis of genome-wide association studies for height and body mass index in ∼700000 individuals of European ancestry. Human Molecular Genetics, 27 20: 3641-3649. doi:10.1093/hmg/ddy271

Genetic regulation of disease risk and endometrial gene expression highlights potential target genes for endometriosis and polycystic ovarian syndrome

Fung, Jenny N., Mortlock, Sally, Girling, Jane E., Holdsworth-Carson, Sarah J., Teh, Wan Tinn, Zhu, Zhihong, Lukowski, Samuel W., McKinnon, Brett D., McRae, Allan, Yang, Jian, Healey, Martin, Powell, Joseph E., Rogers, Peter A. W. and Montgomery, Grant W (2018) Genetic regulation of disease risk and endometrial gene expression highlights potential target genes for endometriosis and polycystic ovarian syndrome. Scientific Reports, 8 1: 11424. doi:10.1038/s41598-018-29462-y

Genome-wide association analyses identify 143 risk variants and putative regulatory mechanisms for type 2 diabetes

Xue, Angli, Wu, Yang, Zhu, Zhihong, Zhang, Futao, Kemper, Kathryn E., Zheng, Zhili, Yengo, Loic, Lloyd-Jones, Luke R., Sidorenko, Julia, Wu, Yeda, eQTLGen Consortium, McRae, Allan F., Visscher, Peter M., Zeng, Jian and Yang, Jian (2018) Genome-wide association analyses identify 143 risk variants and putative regulatory mechanisms for type 2 diabetes. Nature Communications, 9 1: 2941. doi:10.1038/s41467-018-04951-w

Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals

Lee, James J., Wedow, Robbee, Okbay, Aysu, Kong, Edward, Maghzian, Omeed, Zacher, Meghan, Nguyen-Viet, Tuan Anh, Bowers, Peter, Sidorenko, Julia, Karlsson Linnér, Richard, Fontana, Mark Alan, Kundu, Tushar, Lee, Chanwook, Li, Hui, Li, Ruoxi, Royer, Rebecca, Timshel, Pascal N., Walters, Raymond K., Willoughby, Emily A., Yengo, Loïc, 23andMe Research Team, COGENT (Cognitive Genomics Consortium), Social Science Genetic Association Consortium, Alver, Maris, Bao, Yanchun, Clark, David W., Day, Felix R., Furlotte, Nicholas A., Joshi, Peter K., Kemper, Kathryn E., Kleinman, Aaron, Langenberg, Claudia, Mägi, Reedik, Trampush, Joey W., Verma, Shefali Setia, Wu, Yang, Lam, Max, Zhao, Jing Hua, Zheng, Zhili, Boardman, Jason D, Campbell, Harry, Freese, Jeremy, Harris, Kathleen Mullan, Hayward, Caroline, Herd, Pamela, Kumari, Meena, Lencz, Todd, Luan, Jian'an, Malhotra, Anil K., Metspalu, Andres, Milani, Lili, Ong, Ken K., Perry, John R. B., Porteous, David J., Ritchie, Marylyn D., Smart, Melissa C., Smith, Blair H., Tung, Joyce Y., Wareham, Nicholas J., Wilson, James F., Beauchamp, Jonathan P., Conley, Dalton C., Esko, Tõnu, Lehrer, Steven F., Magnusson, Patrik K. E., Oskarsson, Sven, Pers, Tune H., Robinson, Matthew R., Thom, Kevin, Watson, Chelsea, Chabris, Christopher F., Meyer, Michelle N., Laibson, David I., Yang, Jian, Johannesson, Magnus, Koellinger, Philipp D., Turley, Patrick, Visscher, Peter M., Benjamin, Daniel J. and Cesarini, David (2018) Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals. Nature Genetics, 50 8: 1112-1121. doi:10.1038/s41588-018-0147-3

Common disease is more complex than implied by the core gene omnigenic model

Wray, Naomi R., Wijmenga, Cisca, Sullivan, Patrick F., Yang, Jian and Visscher, Peter M. (2018) Common disease is more complex than implied by the core gene omnigenic model. Cell, 173 7: 1573-1580. doi:10.1016/j.cell.2018.05.051

Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood

Qi, Ting, Wu, Yang, Zeng, Jian, Zhang, Futao, Xue, Angli, Jiang, Longda, Zhu, Zhihong, Kemper, Kathryn, Yengo, Loic, Zheng, Zhili, eQTLGen Consortium, Marioni, Riccardo E., Montgomery, Grant W., Deary, Ian J., Wray, Naomi R., Visscher, Peter M., McRae, Allan F. and Yang, Jian (2018) Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood. Nature Communications, 9 1: 2282. doi:10.1038/s41467-018-04558-1

GWAS on family history of Alzheimer's disease

Marioni, Riccardo E., Harris, Sarah E., Zhang, Qian, McRae, Allan F., Hagenaars, Saskia P., Hill, W. David, Davies, Gail, Ritchie, Craig W., Gale, Catharine R., Starr, John M., Goate, Alison M., Porteous, David J., Yang, Jian, Evans, Kathryn L., Deary, Ian J., Wray, Naomi R. and Visscher, Peter M. (2018) GWAS on family history of Alzheimer's disease. Translational Psychiatry, 8 1: 99. doi:10.1038/s41398-018-0150-6

Global genetic differentiation of complex traits shaped by natural selection in humans

Guo, Jing, Wu, Yang, Zhu, Zhihong, Zheng, Zhili, Trzaskowski, Maciej, Zeng, Jian, Robinson, Matthew R., Visscher, Peter M. and Yang, Jian (2018) Global genetic differentiation of complex traits shaped by natural selection in humans. Nature Communications, 9 1: 1865. doi:10.1038/s41467-018-04191-y

Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

Wray, Naomi R., Ripke, Stephan, Mattheisen, Manuel, Trzaskowski, Maciej, Byrne, Enda M., Abdellaoui, Abdel, Adams, Mark J., Agerbo, Esben, Air, Tracy M., Andlauer, Till M. F., Bacanu, Silviu-Alin, Baekvad-Hansen, Marie, Beekman, Aartjan F. T., Bigdeli, Tim B., Binder, Elisabeth B., Blackwood, Douglas R. H., Bryois, Julien, Buttenschon, Henriette N., Bybjerg-Grauholm, Jonas, Cai, Na, Castelao, Enrique, Christensen, Jane Hvarregaard, Clarke, Toni-Kim, Coleman, Jonathan I. R., Colodro-Conde, Lucia, Couvy-Duchesne, Baptiste, Craddock, Nick, Crawford, Gregory E., Crowley, Cheynna A., Dashti, Hassan S., Davies, Gail, Deary, Ian J., Degenhardt, Franziska, Derks, Eske M., Direk, Nese, Dolan, Conor V., Dunn, Erin C., Eley, Thalia C., Eriksson, Nicholas, Escott-Price, Valentina, Kiadeh, Farnush Hassan Farhadi, Finucane, Hilary K., Forstner, Andreas J., Frank, Josef, Gaspar, Helena A., Gill, Michael, Giusti-Rodriguez, Paola, Goes, Fernando S., Gordon, Scott D., Grove, Jakob, Hall, Lynsey S., Hannon, Eilis, Hansen, Christine Soholm, Hansen, Thomas F., Herms, Stefan, Hickie, Ian B., Hoffmann, Per, Homuth, Georg, Horn, Carsten, Hottenga, Jouke-Jan, Hougaard, David M., Hu, Ming, Hyde, Craig L., Ising, Marcus, Jansen, Rick, Jin, Fulai, Jorgenson, Eric, Knowles, James A., Kohane, Isaac S., Kraft, Julia, Kretzschmar, Warren W., Krogh, Jesper, Kutalik, Zoltan, Lane, Jacqueline M., Li, Yihan, Li, Yun, Lind, Penelope A., Liu, Xiaoxiao, Lu, Leina, MacIntyre, Donald J., MacKinnon, Dean F., Maier, Robert M., Maier, Wolfgang, Marchini, Jonathan, Mbarek, Hamdi, McGrath, Patrick, McGuffin, Peter, Medland, Sarah E., Mehta, Divya, Middeldorp, Christel M., Mihailov, Evelin, Milaneschi, Yuri, Milani, Lili, Mill, Jonathan, Mondimore, Francis M., Montgomery, Grant W., Mostafavi, Sara, Mullins, Niamh, Nauck, Matthias, Ng, Bernard, Nivard, Michel G., Nyholt, Dale R., O'Reilly, Paul F., Oskarsson, Hogni, Owen, Michael J., Painter, Jodie N., Pedersen, Carsten Bocker, Pedersen, Marianne Giortz, Peterson, Roseann E., Pettersson, Erik, Peyrot, Wouter J., Pistis, Giorgio, Posthuma, Danielle, Purcell, Shaun M., Quiroz, Jorge A., Qvist, Per, Rice, John P., Riley, Brien P., Rivera, Margarita, Mirza, Saira Saeed, Saxena, Richa, Schoevers, Robert, Schulte, Eva C., Shen, Ling, Shi, Jianxin, Shyn, Stanley I., Sigurdsson, Engilbert, Sinnamon, Grant B. C., Smit, Johannes H., Smith, Daniel J., Stefansson, Hreinn, Steinberg, Stacy, Stockmeier, Craig A., Streit, Fabian, Strohmaier, Jana, Tansey, Katherine E., Teismann, Henning, Teumer, Alexander, Thompson, Wesley, Thomson, Pippa A., Thorgeirsson, Thorgeir E., Tian, Chao, Traylor, Matthew, Treutlein, Jens, Trubetskoy, Vassily, Uitterlinden, Andre G., Umbricht, Daniel, Van der Auwera, Sandra, van Hemert, Albert M., Viktorin, Alexander, Visscher, Peter M., Wang, Yunpeng, Webb, Bradley T., Weinsheimer, Shantel Marie, Wellmann, Juegen, Willemsen, Gonneke, Witt, Stephanie H., Wu, Yang, Xi, Hualin S., Yang, Jian, Zhang, Futao, Arolt, Volker, Baune, Bernhard T., Berger, Klaus, Boomsma, Dorret I., Cichon, Sven, Dannlowski, Udo, de Geus, E. C. J., DePaulo, J. Raymond, Domenici, Enrico, Domschke, Katharina, Esko, Tonu, Grabe, Hans J., Hamilton, Steven P., Hayward, Caroline, Heath, Andrew C., Hinds, David A., Kendler, Kenneth S., Kloiber, Stefan, Lewis, Glyn, Li, Qingqin S., Lucae, Susanne, Madden, Pamela F. A., Magnusson, Patrik K., Martin, Nicholas G., McIntosh, Andrew M., Metspalu, Andres, Mors, Ole, Mortensen, Preben Bo, Mueller-Myhsok, Bertram, Nordentoft, Merete, Noethen, Markus M., O'Donovan, Michael C., Paciga, Sara A., Pedersen, Nancy L., Penninx, Brenda W. J. H., Perlis, Roy H., Porteous, David J., Potash, James B., Preisig, Martin, Rietschel, Marcella, Schaefer, Catherine, Schulze, Thomas G., Smoller, Jordan W., Stefansson, Kari, Tiemeier, Henning, Uher, Rudolf, Voelzke, Henry, Weissman, Myrna M., Werge, Thomas, Winslow, Ashley R., Lewis, Cathryn M., Levinson, Douglas F., Breen, Gerome, Borglum, Anders D. and Sullivan, Patrick F. (2018) Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression. Nature Genetics, 50 5: 668-+. doi:10.1038/s41588-018-0090-3

Comparison of methods that use whole genome data to estimate the heritability and genetic architecture of complex traits

Evans, Luke M., Tahmasbi, Rasool, Vrieze, Scott I., Abecasis, Gonçalo R., Das, Sayantan, Gazal, Steven, Bjelland, Douglas W., de Candia, Teresa R., Haplotype Reference Consortium, Goddard, Michael E., Neale, Benjamin M., Yang, Jian, Visscher, Peter M. and Keller, Matthew C. (2018) Comparison of methods that use whole genome data to estimate the heritability and genetic architecture of complex traits. Nature genetics, 50 5: 737-745. doi:10.1038/s41588-018-0108-x

Signatures of negative selection in the genetic architecture of human complex traits

Zeng, Jian, de Vlaming, Ronald, Wu, Yang, Robinson, Matthew R., Lloyd-Jones, Luke R., Yengo, Loic, Yap, Chloe X., Xue, Angli, Sidorenko, Julia, McRae, Allan F., Powell, Joseph E., Montgomery, Grant W., Metspalu, Andres, Esko, Tonu, Gibson, Greg, Wray, Naomi R., Visscher, Peter M. and Yang, Jian (2018) Signatures of negative selection in the genetic architecture of human complex traits. Nature Genetics, 50 5: 746-753. doi:10.1038/s41588-018-0101-4

Narrow-sense heritability estimation of complex traits using identity-by-descent information

Evans, Luke M., Tahmasbi, Rasool, Jones, Matt, Vrieze, Scott I., Abecasis, Gonçalo R., Das, Sayantan, Bjelland, Douglas W., de Candia, Teresa R., Yang, Jian, Goddard, Michael E., Visscher, Peter M., Keller, Matthew C. and Haplotype Reference Consortium (2018) Narrow-sense heritability estimation of complex traits using identity-by-descent information. Heredity, 1-15. doi:10.1038/s41437-018-0067-0

Improving genetic prediction by leveraging genetic correlations among human diseases and traits

Maier, Robert M, Zhu, Zhihong, Lee, Sang Hong, Trzaskowski, Maciej, Ruderfer, Douglas M, Stahl, Eli A, Ripke, Stephan, Wray, Naomi R, Yang, Jian, Visscher, Peter M and Robinson, Matthew R (2018) Improving genetic prediction by leveraging genetic correlations among human diseases and traits. Nature Communications, 9 1: 989. doi:10.1038/s41467-017-02769-6

Integrative analysis of omics summary data reveals putative mechanisms underlying complex traits

Wu, Yang, Zeng, Jian, Zhang, Futao, Zhu, Zhihong, Qi, Ting, Zheng, Zhili, Lloyd-Jones, Luke R., Marioni, Riccardo E., Martin, Nicholas G., Montgomery, Grant W., Deary, Ian J., Wray, Naomi R., Visscher, Peter M., McRae, Allan F. and Yang, Jian (2018) Integrative analysis of omics summary data reveals putative mechanisms underlying complex traits. Nature Communications, 9 918: . doi:10.1038/s41467-018-03371-0

Reply to Kardos et al.: estimation of inbreeding depression from SNP data

Yengo, Loic, Zhu, Zhihong, Wray, Naomi R., Weir, Bruce S., Yang, Jian, Robinson, Matthew R. and Visscher, Peter M. (2018) Reply to Kardos et al.: estimation of inbreeding depression from SNP data. Proceedings of the National Academy of Sciences, 115 11: E2494-E2495. doi:10.1073/pnas.1718598115

Transformation of summary statistics from linear mixed model association on all-or-none traits to odds ratio

Lloyd-Jones, Luke R., Robinson, Matthew R., Yang, Jian and Visscher, Peter M. (2018) Transformation of summary statistics from linear mixed model association on all-or-none traits to odds ratio. Genetics, 208 4: 1397-1408. doi:10.1534/genetics.117.300360

Causal associations between risk factors and common diseases inferred from GWAS summary data

Zhu, Zhihong, Zheng, Zhili, Zhang, Futao, Wu, Yang, Trzaskowski, Maciej, Maier, Robert, Robinson, Matthew R., McGrath, John J, Visscher, Peter M, Wray, Naomi R and Yang, Jian (2018) Causal associations between risk factors and common diseases inferred from GWAS summary data. Nature Communications, 9 1: . doi:10.1038/s41467-017-02317-2

Predictive accuracy of combined genetic and environmental risk scores

Dudbridge, Frank, Pashayan, Nora and Yang, Jian (2017) Predictive accuracy of combined genetic and environmental risk scores. Genetic Epidemiology, 42 1: 4-19. doi:10.1002/gepi.22092

Whole-exome sequencing in amyotrophic lateral sclerosis suggests NEK1 is a risk gene in Chinese

Gratten, Jacob, Zhao, Qiongyi, Benyamin, Beben, Garton, Fleur, He, Ji, Leo, Paul J., Mangelsdorf, Marie, Anderson, Lisa, Zhang, Zong-Hong, Chen, Lu, Chen, Xiang-Ding, Cremin, Katie, Deng, Hong-Weng, Edson, Janette, Han, Ying-Ying, Harris, Jessica, Henders, Anjali K., Jin, Zi-Bing, Li, Zhongshan, Lin, Yong, Liu, Xiaolu, Marshall, Mhairi, Mowry, Bryan J., Ran, Shu, Reutens, David C., Song, Sharon, Tan, Li-Jun, Tang, Lu, Wallace, Robyn H., Wheeler, Lawrie, Wu, Jinyu, Yang, Jian, Xu, Huji, Visscher, Peter M., Bartlett, Perry F., Brown, Matthew A., Wray, Naomi R. and Fan, Dongsheng (2017) Whole-exome sequencing in amyotrophic lateral sclerosis suggests NEK1 is a risk gene in Chinese. Genome Medicine, 9 97: 97. doi:10.1186/s13073-017-0487-0

Partitioning phenotypic variance due to parent-of-origin effects using genomic relatedness matrices

Laurin, Charles, Cuellar-Partida, Gabriel, Hemani, Gibran, Smith, George Davey, Yang, Jian and Evans, David M. (2017) Partitioning phenotypic variance due to parent-of-origin effects using genomic relatedness matrices. Behavior Genetics, 48 1: 67-79. doi:10.1007/s10519-017-9880-0

Inference in Psychiatry via 2-Sample Mendelian Randomization-From Association to Causal Pathway?

Byrne, Enda M, Yang, Jian and Wray, Naomi R (2017) Inference in Psychiatry via 2-Sample Mendelian Randomization-From Association to Causal Pathway?. JAMA psychiatry, 74 12: 1191-1192. doi:10.1001/jamapsychiatry.2017.3162

Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis

Benyamin, Beben, He, Ji, Zhao, Qiongyi, Gratten, Jacob, Garton, Fleur, Leo, Paul J., Liu, Zhijun, Mangelsdorf, Marie, Al-Chalabi, Ammar, Anderson, Lisa, Butler, Timothy J., Chen, Lu, Chen, Xiang-Ding, Cremin, Katie, Deng, Hong-Weng, Devine, Matthew, Edson, Janette, Fifita, Jennifer A., Furlong, Sarah, Han, Ying-Ying, Harris, Jessica, Henders, Anjali K., Jeffree, Rosalind L., Jin, Zi-Bing, Li, Zhongshan, Li, Ting, Li, Mengmeng, Lin, Yong, Liu, Xiaolu, Marshall, Mhairi, McCann, Emily P., Mowry, Bryan J., Ngo, Shyuan T., Pamphlett, Roger, Ran, Shu, Reutens, David C., Rowe, Dominic B., Sachdev, Perminder, Shah, Sonia, Song, Sharon, Tan, Li-Jun, Tang, Lu, van den Berg, Leonard H., van Rheenen, Wouter, Veldink, Jan H., Wallace, Robyn H., Wheeler, Lawrie, Williams, Kelly L., Wu, Jinyu, Wu, Xin, Yang, Jian, Yue, Weihua, Zhang, Zong-Hong, Zhang, Dai, Noakes, Peter G., Blair, Ian P., Henderson, Robert D., McCombe, Pamela A., Visscher, Peter M., Xu, Huji, Bartlett, Perry F., Brown, Matthew A., Wray, Naomi R. and Fan, Dongsheng (2017) Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis. Nature Communications, 8 1: 611. doi:10.1038/s41467-017-00471-1

Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood

Lukowski, Samuel W., Lloyd-Jones, Luke R., Holloway, Alexander, Kirsten, Holger, Hemani, Gibran, Yang, Jian, Small, Kerrin, Zhao, Jing, Metspalu, Andres, Dermitzakis, Emmanouil T., Gibson, Greg, Spector, Timothy D., Thiery, Joachim, Scholz, Markus, Montgomery, Grant W., Esko, Tonu, Visscher, Peter M. and Powell, Joseph E. (2017) Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood. Nature Communications, 8 483: . doi:10.1038/s41467-017-00473-z

Concepts, estimation and interpretation of SNP-based heritability

Yang, Jian, Zeng, Jian, Goddard, Michael E., Wray, Naomi R. and Visscher, Peter M. (2017) Concepts, estimation and interpretation of SNP-based heritability. Nature Genetics, 49 9: 1304-1310. doi:10.1038/ng.3941

Constraints on eQTL fine mapping in the presence of multisite local regulation of gene expression

Zeng, Biao, Lloyd-Jones, Luke R., Holloway, Alexander, Marigorta, Urko M., Metspalu, Andres, Montgomery, Grant W., Esko, Tonu, Brigham, Kenneth L., Quyyumi, Arshed A., Idaghdour, Youssef, Yang, Jian, Visscher, Peter M., Powell, Joseph E. and Gibson, Greg (2017) Constraints on eQTL fine mapping in the presence of multisite local regulation of gene expression. G3: Genes Genomes Genetics, 7 8: 2533-2544. doi:10.1534/g3.117.043752

Detection and quantification of inbreeding depression for complex traits from SNP data

Yengo, Loic, Zhu, Zhihong, Wray, Naomi R., Weir, Bruce S., Yang, Jian, Robinson, Matthew R. and Visscher, Peter M. (2017) Detection and quantification of inbreeding depression for complex traits from SNP data. PNAS: Proceedings of the National Academy of Sciences of the United States of America, 114 32: 8602-8607. doi:10.1073/pnas.1621096114

Genotype-covariate interaction effects and the heritability of adult body mass index

Robinson, Matthew R., English, Geoffrey, Moser, Gerhard, Lloyd-Jones, Luke R., Triplett, Marcus A., Zhu, Zhihong, Nolte, Ilja M., Van Vliet-Ostaptchouk, Jana V., Snieder, Harold, Esko, Tonu, Milani, Lili, Magi, Reedik, Metspalu, Andres, Magnusson, Patrik K. E., Pedersen, Nancy L., Ingelsson, Erik, Johannesson, Magnus, Yang, Jian, Cesarini, David and Visscher, Peter M. (2017) Genotype-covariate interaction effects and the heritability of adult body mass index. Nature Genetics, 49 8: 1174-1181. doi:10.1038/ng.3912

10 years of GWAS discovery: biology, function, and translation

Visscher, Peter M., Wray, Naomi R., Zhang, Qian, Sklar, Pamela, McCarthy, Mark I., Brown, Matthew A. and Yang, Jian (2017) 10 years of GWAS discovery: biology, function, and translation. American Journal of Human Genetics, 101 1: 5-22. doi:10.1016/j.ajhg.2017.06.005

Meta-analysis identifies five novel loci associated with endometriosis highlighting key genes involved in hormone metabolism

Sapkota, Yadav, Steinthorsdottir, Valgerdur, Morris, Andrew P., Fassbender, Amelie, Rahmioglu, Nilufer, De Vivo, Immaculata, Buring, Julie E., Zhang, Futao, Edwards, Todd L., Jones, Sarah, Dorien, O., Peterse, Danielle, Rexrode, Kathryn M., Ridker, Paul M., Schork, Andrew J., MacGregor, Stuart, Martin, Nicholas G., Becker, Christian M., Adachi, Sosuke, Yoshihara, Kosuke, Enomoto, Takayuki, Takahashi, Atsushi, Kamatani, Yoichiro, Matsuda, Koichi, Kubo, Michiaki, Thorleifsson, Gudmar, Geirsson, Reynir T., Thorsteinsdottir, Unnur, Wallace, Leanne M., Yang, Jian, Edwards, Digna R. Velez, Nyegaard, Mette, Low, Siew-Kee, Zondervan, Krina T., Missmer, Stacey A., D'Hooghe, Thomas, Montgomery, Grant W., Chasman, Daniel I., Stefansson, Kari, Tung, Joyce Y. and Nyholt, Dale R. (2017) Meta-analysis identifies five novel loci associated with endometriosis highlighting key genes involved in hormone metabolism. Nature Communications, 8 15539. doi:10.1038/ncomms15539

Quantifying the mapping precision of genome-wide association studies using whole-genome sequencing data

Wu, Yang, Zheng, Zhili, Visscher, Peter M. and Yang, Jian (2017) Quantifying the mapping precision of genome-wide association studies using whole-genome sequencing data. Genome Biology, 18 1: 86. doi:10.1186/s13059-017-1216-0

Genetic signatures of high-altitude adaptation in Tibetans

Yang, Jian, Jin, Zi-Bing, Chen, Jie, Huang, Xiu-Feng, Li, Xiao-Man, Liang, Yuan-Bo, Mao, Jian-Yang, Chen, Xin, Zheng, Zhili, Bakshi, Andrew, Zheng, Dong-Dong, Zheng, Mei-Qin, Wray, Naomi R., Visscher, Peter M., Lu, Fan and Qu, Jia (2017) Genetic signatures of high-altitude adaptation in Tibetans. Proceedings of the National Academy of Sciences, 114 16: 4189-4194. doi:10.1073/pnas.1617042114

The Genetic Architecture of Gene Expression in Peripheral Blood (vol 100, pg 228, 2017)

Lloyd-Jones, Luke R., Holloway, Alexander, McRae, Allan, Yang, Jian, Small, Kerrin, Zhao, Jing, Zeng, Biao, Bakshi, Andrew, Metspalu, Andres, Dermitzakis, Manolis, Gibson, Greg, Spector, Tim, Montgomery, Grant, Esko, Tonu, Visscher, Peter M. and Powell, Joseph E. (2017) The Genetic Architecture of Gene Expression in Peripheral Blood (vol 100, pg 228, 2017). American Journal of Human Genetics, 100 2: 371-371. doi:10.1016/j.ajhg.2017.01.026

Genetic evidence of assortative mating in humans

Robinson, Matthew R., Kleinman, Aaron, Graff, Mariaelisa, Vinkhuyzen, Anna A. E., Couper, David, Miller, Michael B., Peyrot, Wouter J., Abdellaoui, Abdel, Zietsch, Brendan P., Nolte, Ilja M., van Vliet-Ostaptchouk, Jana V., Snieder, Harold, The LifeLines Cohort Study, Genetic Investigation of Anthropometric Traits (GIANT) consortium, Medland, Sarah E., Martin, Nicholas G., Magnusson, Patrik K. E., Iacono, William G., McGue, Matt, North, Kari E., Yang, Jian and Visscher, Peter M. (2017) Genetic evidence of assortative mating in humans. Nature Human Behaviour, 1 1: . doi:10.1038/s41562-016-0016

The genetic architecture of gene expression in peripheral blood

Lloyd-Jones, Luke R., Holloway, Alexander, McRae, Allan, Yang, Jian, Small, Kerrin, Zeng, Biao, Bakshi, Andrew, Metspalu, Andres, Dermitzakis, Manolis, Gibson, Greg, Spector, Tim, Montgomery, Grant, Esko, Tonu, Visscher, Peter M. and Powell, Joseph E. (2017) The genetic architecture of gene expression in peripheral blood. American Journal of Human Genetics, 100 2: 228-237. doi:10.1016/j.ajhg.2016.12.008

Autosomal genetic control of human gene expression does not differ across the sexes

Kassam, Irfahan, Lloyd-Jones, Luke, Holloway, Alexander, Small, Kerrin S., Zeng, Biao, Bakshi, Andrew, Metspalu, Andres, Gibson, Greg, Spector, Tim D., Esko, Tonu, Montgomery, Grant W., Powell, Joseph E., Yang, Jian, Visscher, Peter M. and McRae, Allan F. (2016) Autosomal genetic control of human gene expression does not differ across the sexes. Genome Biology, 17 1: 248.1-248.10. doi:10.1186/s13059-016-1111-0

Identification of miRNAs as non-invasive biomarkers for early diagnosis of lung cancers

Wang, Wenzhe, Li, Weili, Ding, Mingjian, Yuan, Haining, Yang, Jian, Meng, Wen, Jin, Er, Wang, Xiaoju and Ma, Shenglin (2016) Identification of miRNAs as non-invasive biomarkers for early diagnosis of lung cancers. Tumor Biology, 37 12: 16287-16293. doi:10.1007/s13277-016-5442-y

Assessing the genetic overlap between BMI and cognitive function

Marioni, R. E., Yang, J., Dykiert, D., Mottus, R., Campbell, A., Davies, G., Hayward, C., Porteous, D. J., Visscher, P. M. and Deary, I. J. (2016) Assessing the genetic overlap between BMI and cognitive function. Molecular Psychiatry, 21 10: 1477-1482. doi:10.1038/mp.2015.205

52 genetic loci influencing myocardial mass

van der Harst, Pim, van Setten, Jessica, Verweij, Niek, Vogler, Georg, Franke, Lude, Maurano, Matthew T., Wang, Xinchen, Mateo Leach, Irene, Eijgelsheim, Mark, Sotoodehnia, Nona, Hayward, Caroline, Sorice, Rossella, Meirelles, Osorio, Lyytikainen, Leo-Pekka, Polasek, Ozren, Tanaka, Toshiko, Arking, Dan E., Ulivi, Sheila, Trompet, Stella, Muller-Nurasyid, Martina, Smith, Albert V., Dorr, Marcus, Kerr, Kathleen F., Magnani, Jared W., Del Greco, Fabiola, Zhang, Weihua, Nolte, Ilja M., Silva, Claudia T., Padmanabhan, Sandosh, Tragante, Vinicius, Esko, Tõnu, Abecasis, Gonçalo R., Adriaens, Michiel E., Andersen, Karl, Barnett, Phil, Bis, Joshua C., Bodmer, Rolf, Buckley, Brendan M., Campbell, Harry, Cannon, Megan V., Chakravarti, Aravinda, Chen, Lin Y., Delitala, Alessandro, Devereux, Richard B., Doevendans, Pieter A., Dominiczak, Anna F., Ferrucci, Luigi, Ford, Ian, Gieger, Christian, Harris, Tamara B., Haugen, Eric, Heinig, Matthias, Hernandez, Dena G., Hillege, Hans L., Hirschhorn, Joel N., Hofman, Albert, Hubner, Norbert, Hwang, Shih-Jen, Iorio, Annamaria, Kahonen, Mika, Kellis, Manolis, Kolcic, Ivana, Kooner, Ishminder K., Kooner, Jaspal S., Kors, Jan A., Lakatta, Edward G., Lage, Kasper, Launer, Lenore J., Levy, Daniel, Lundby, Alicia, Macfarlane, Peter W., May, Dalit, Meitinger, Thomas, Metspalu, Andres, Nappo, Stefania, Naitza, Silvia, Neph, Shane, Nord, Alex S., Nutile, Teresa, Okin, Peter M., Olsen, Jesper V., Oostra, Ben A., Penninger, Josef M., Pennacchio, Len A., Pers, Tune H., Perz, Siegfried, Peters, Annette, Pinto, Yigal M., Pfeufer, Arne, Pilia, Maria Grazia, Pramstaller, Peter P., Prins, Bram P., Raitakari, Olli T., Raychaudhuri, Soumya, Rice, Ken M., Rossin, Elizabeth J., Rotter, Jerome I., Schafer, Sebastian, Schlessinger, David, Schmidt, Carsten O., Sehmi, Jobanpreet, Sillje, Herman H. W., Sinagra, Gianfranco, Sinner, Moritz F., Slowikowski, Kamil, Soliman, Elsayed Z., Spector, Timothy D., Spiering, Wilko, Stamatoyannopoulos, John A., Stolk, Ronald P., Strauch, Konstantin, Tan, Sian-Tsung, Tarasov, Kirill V., Trinh, Bosco, Uitterlinden, Andre G., van den Boogaard, Malou, van Duijn, Cornelia M., van Gilst, Wiek H., Viikari, Jorma S., Visscher, Peter M., Vitart, Veronique, Volker, Uwe, Waldenberger, Melanie, Weichenberger, Christian X., Westra, Harm-Jan, Wijmenga, Cisca, Wolffenbuttel, Bruce H., Yang, Jian, Bezzina, Connie R., Munroe, Patricia B., Snieder, Harold, Wright, Alan F., Rudan, Igor, Boyer, Laurie A., Asselbergs, Folkert W., van Veldhuisen, Dirk J., Stricker, Bruno H., Psaty, Bruce M., Ciullo, Marina, Sanna, Serena, Lehtimaki, Terho, Wilson, James F., Bandinelli, Stefania, Alonso, Alvaro, Gasparini, Paolo, Jukema, J. Wouter, Kaab, Stefan, Gudnason, Vilmundur, Felix, Stephan B., Heckbert, Susan R., de Boer, Rudolf A., Newton-Cheh, Christopher, Hicks, Andrew A., Chambers, John C., Jamshidi, Yalda, Visel, Axel, Christoffels, Vincent M., Isaacs, Aaron, Samani, Nilesh J. and de Bakker, Paul I. W. (2016) 52 genetic loci influencing myocardial mass. Journal of the American College of Cardiology, 68 13: 1435-1448. doi:10.1016/j.jacc.2016.07.729

Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits

Bakshi, Andrew, Zhu, Zhihong, Vinkhuyzen, Anna A. E., Hill, W. David, Mcrae, Allan F., Visscher, Peter M. and Yang, Jian (2016) Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits. Scientific Reports, 6 32894. doi:10.1038/srep32894

Genome-wide association analyses identify new risk variants and the genetic architecture of amyotrophic lateral sclerosis

van Rheenen, Wouter, Shatunov, Aleksey, Dekker, Annelot M., McLaughlin, Russell L., Diekstra, Frank P., Pulit, Sara L., van der Spek, Rick A. A., Vosa, Urmo, de Jong, Simone, Robinson, Matthew R., Yang, Jian, Fogh, Isabella, van Doormaal, Perry T. C., Tazelaar, Gijs H. P., Koppers, Max, Blokhuis, Anna M., Sproviero, William, Jones, Ashley R., Kenna, Kevin P., van Eijk, Kristel R., Harschnitz, Oliver, Schellevis, Raymond D., Brands, William J., Medic, Jelena, Menelaou, Androniki, Vajda, Alice, Ticozzi, Nicola, Lin, Kuang, Rogelj, Boris, Vrabec, Katarina, Ravnik-Glavac, Metka, Koritnik, Blazi, Zidar, Janez, Leonardis, Lea, Groselj, Leja Dolenc, Millecamps, Stephanie, Salachas, Francois, Meininger, Vincent, de Carvalho, Mamede, Pinto, Susana, Mora, Jesus S., Rojas-Garcia, Ricardo, Polak, Meraida, Chandran, Siddharthan, Colville, Shuna, Swingler, Robert, Morrison, Karen E., Shaw, Pamela J., Hardy, John, Orrell, Richard W., Pittman, Alan, Sidle, Katie, Fratta, Pietro, Malaspina, Andrea, Topp, Simon, Petri, Susanne, Abdulla, Susanne, Drepper, Carsten, Sendtner, Michael, Meyer, Thomas, Ophoff, Roel A., Staats, Kim A., Wiedau-Pazos, Martina, Lomen-Hoerth, Catherine, Van Deerlin, Vivianna M., Trojanowski, John Q., Elman, Lauren, McCluskey, Leo, Basak, A. Nazli, Tunca, Ceren, Hamzeiy, Hamid, Parman, Yesim, Meitinger, Thomas, Lichtner, Peter, Radivojkov-Blagojevic, Milena, Andres, Christian R., Maurel, Cindy, Bensimon, Gilbert, Landwehrmeyer, Bernhard, Brice, Alexis, Payan, Christine A. M., Saker-Delye, Safaa, Duerr, Alexandra, Wood, Nicholas W., Tittmann, Lukas, Lieb, Wolfgang, Franke, Andre, Rietschel, Marcella, Cichon, Sven, Noethen, Markus M., Amouyel, Philippe, Tzourio, Christophe, Dartigues, Jean-Francois, Uitterlinden, Andre G., Rivadeneira, Fernando, Estrada, Karol, Hofman, Albert, Curtis, Charles, Blauw, Hylke M., van der Kooi, Anneke J., de Visser, Marianne, Goris, An, Weber, Markus, Shaw, Christopher E., Smith, Bradley N., Pansarasa, Orietta, Cereda, Cristina, Del Bo, Roberto, Comi, Giacomo P., D'Alfonso, Sandra, Bertolin, Cinzia, Soraru, Gianni, Mazzini, Letizia, Pensato, Viviana, Gellera, Cinzia, Tiloca, Cinzia, Ratti, Antonia, Calvo, Andrea, Moglia, Cristina, Brunetti, Maura, Arcuti, Simona, Capozzo, Rosa, Zecca, Chiara, Lunetta, Christian, Penco, Silvana, Riva, Nilo, Padovani, Alessandro, Filosto, Massimiliano, Muller, Bernard, Stuit, Robbert Jan, Blair, Ian, Zhang, Katharine, McCann, Emily P., Fifita, Jennifer A., Nicholson, Garth A., Rowe, Dominic B., Pamphlett, Roger, Kiernan, Matthew C., Grosskreutz, Julian, Witte, Otto W., Ringer, Thomas, Prell, Tino, Stubendorff, Beatrice, Kurth, Ingo, Huebner, Christian A., Leigh, P. Nigel, Casale, Federico, Chio, Adrian, Beghi, Ettore, Pupillo, Elisabetta, Tortelli, Rosanna, Logroscino, Giancarlo, Powell, John, Ludolph, Albert C., Weishaupt, Jochen H., Robberecht, Wim, Van Damme, Philip, Franke, Lude, Pers, Tune H., Brown, Robert H., Glass, Jonathan D., Landers, John E., Hardiman, Orla, Andersen, Peter M., Corcia, Philippe, Vourc'h, Patrick, Silani, Vincenzo, Wray, Naomi R., Visscher, Peter M., de Bakker, Paul I. W., van Es, Michael A., Pasterkamp, R. Jeroen, Lewis, Cathryn M., Breen, Gerome, Al-Chalabi, Ammar, van den Berg, Leonard H. and Veldink, Jan H. (2016) Genome-wide association analyses identify new risk variants and the genetic architecture of amyotrophic lateral sclerosis. Nature Genetics, 48 9: 1043-1048. doi:10.1038/ng.3622

Across-cohort QC analyses of GWAS summary statistics from complex traits

Chen, Guo-Bo, Lee, Sang Hong, Robinson, Matthew R., Trzaskowski, Maciej, Zhu, Zhi-Xiang, Winkler, Thomas W., Day, Felix R., Croteau-Chonka, Damien C., Wood, Andrew R., Locke, Adam E., Kutalik, Zoltán, Loos, Ruth J. F., Frayling, Timothy M., Hirschhorn, Joel N., Yang, Jian, Wray, Naomi R. and Visscher, Peter M. (2016) Across-cohort QC analyses of GWAS summary statistics from complex traits. European Journal of Human Genetics, 25 1: 137-146. doi:10.1038/ejhg.2016.106

GCTA-GREML accounts for linkage disequilibrium when estimating genetic variance from genome-wide SNPs

Yang, Jian, Lee, S. Hong, Wray, Naomi R., Goddard, Michael E. and Visscher, Peter M. (2016) GCTA-GREML accounts for linkage disequilibrium when estimating genetic variance from genome-wide SNPs. Proceedings of the National Academy of Sciences, 113 32: E4579-E4580. doi:10.1073/pnas.1602743113

Predicting gene targets from integrative analyses of summary data from GWAS and eQTL studies for 28 human complex traits

Pavlides, Jennifer M. Whitehead, Zhu, Zhihong, Gratten, Jacob, Mcrae, Allan F., Wray, Naomi R. and Yang, Jian (2016) Predicting gene targets from integrative analyses of summary data from GWAS and eQTL studies for 28 human complex traits. Genome Medicine, 8 1: 84. doi:10.1186/s13073-016-0338-4

A plethora of pleiotropy across complex traits

Visscher, Peter M. and Yang, Jian (2016) A plethora of pleiotropy across complex traits. Nature Genetics, 48 7: 707-708. doi:10.1038/ng.3604

Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses

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Genome-wide association study identifies 74 loci associated with educational attainment

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Evidence for genetic overlap between schizophrenia and age at first birth in women

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Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets

Zhu, Zhihong, Zhang, Futao, Hu, Han, Bakshi, Andrew, Robinson, Matthew R., Powell, Joseph E., Montgomery,Grant W., Goddard, Michael E., Wray, Naomi R., Visscher, Peter M. and Yang, Jian (2016) Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets. Nature Genetics, 48 5: 481-487. doi:10.1038/ng.3538

New loci for body fat percentage reveal link between adiposity and cardiometabolic disease risk

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Genome-wide genetic homogeneity between sexes and populations for human height and body mass index

Yang, Jian, Bakshi, Andrew, Zhu, Zhihong, Hemani, Gibran, Vinkhuyzen, Anna A. E., Nolte, Ilja M., van Vliet-Ostaptchouk, Jana V., Snieder, Harold, Study, Lifelines Cohort, Esko, Tonu, Milani, Lili, Maegi, Reedik, Metspalu, Andres, Hamsten, Anders, Magnusson, Patrik K. E., Pedersen, Nancy L., Ingelsson, Erik and Visscher, Peter M. (2015) Genome-wide genetic homogeneity between sexes and populations for human height and body mass index. Human Molecular Genetics, 24 25: 7445-7449. doi:10.1093/hmg/ddv443

The transcriptional landscape of age in human peripheral blood

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Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores

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The UK10K project identifies rare variants in health and disease

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The influence of age and sex on genetic associations with adult body size and shape: a large-scale genome-wide interaction study

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Population genetic differentiation of height and body mass index across Europe

Robinson, Matthew R., Hemani, Gibran, Medina-Gomez, Carolina, Mezzavilla, Massimo, Esko, Tonu, Shakhbazov, Konstantin, Powell, Joseph E., Vinkhuyzen, Anna, Berndt, Sonja I., Gustafsson, Stefan, Justice, Anne E., Kahali, Bratati, Locke, Adam E., Pers, Tune H., Vedantam, Sailaja, Wood, Andrew R., van Rheenen, Wouter, Andreassen, Ole A., Gasparini, Paolo, Metspalu, Andres, van den Berg, Leonard H., Veldink, Jan H., Rivadeneira, Fernando, Werge, Thomas M., Abecasis, Goncalo R., Boomsma, Dorret I., Chasman, Daniel I., de Geus, Eco J. C., Frayling, Timothy M., Hirschhorn, Joel N., Hottenga, Jouke Jan, Ingelsson, Erik, Loos, Ruth J. F., Magnusson, Patrik K. E., Martin, Nicholas G., Montgomery, Grant W., North, Kari E., Pedersen, Nancy L., Spector, Timothy D., Speliotes, Elizabeth K., Goddard, Michael E., Yang, Jian and Visscher, Peter M. (2015) Population genetic differentiation of height and body mass index across Europe. Nature Genetics, 47 11: 1357-1361. doi:10.1038/ng.3401

Genetic variance estimation with imputed variants finds negligible missing heritability for human height and body mass index

Yang, Jian, Bakshi, Andrew, Zhu, Zhihong, Hemani, Gibran, Vinkhuyzen, Anna A. E., Lee, Sang Hong, Robinson, Matthew R., Perry, John R. B., Nolte, Ilja M., van Vliet-Ostaptchouk, Jana V., Snieder, Harold, The LifeLines Cohort Study, Esko, Tonu, Milani, Lili, Maegi, Reedik, Metspalu, Andres, Hamsten, Anders, Magnusson, Patrik K. E., Pedersen, Nancy L., Ingelsson, Erik, Soranzo, Nicole, Keller, Matthew C., Wray, Naomi R., Goddard, Michael E. and Visscher, Peter M. (2015) Genetic variance estimation with imputed variants finds negligible missing heritability for human height and body mass index. Nature Genetics, 47 10: 1114-1120. doi:10.1038/ng.3390

Improving phenotypic prediction by combining genetic and epigenetic associations

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Human fertility, molecular genetics, and natural selection in modern societies

Tropf, Felix C., Stulp, Gert, Barban, Nicola, Visscher, Peter M., Yang, Jian, Snieder, Harold and Mills, Melinda C. (2015) Human fertility, molecular genetics, and natural selection in modern societies. Plos One, 10 6: 1-14. doi:10.1371/journal.pone.0126821

Mendelian randomization study of height and risk of colorectal cancer

Thrift, Aaron P, Gong, Jian, Peters, Ulrike, Chang-Claude, Jenny, Rudolph, Anja, Slattery, Martha L, Chan, Andrew T, Esko, Tonu, Wood, Andrew R, Yang, Jian, Vedantam, Sailaja, Gustafsson, Stefan, Pers, Tune H., Baron, John A., Bezieau, Stephane, Kuery, Sebastien, Ogino, Shuji, Berndt, Sonja I, Casey, Graham, Haile, Robert W, Du, Mengmeng, Harrison, Tabitha A, Thornquist, Mark, Duggan, David J., Le Marchand, Loic, Lemire, Mathieu, Lindor, Noralane M, Seminara, Daniela, Song, Mingyang, Thibodeau, Stephen N, Cotterchio, Michelle, Win, Aung Ko, Jenkins, Mark A, Hopper, John L, Ulrich, Cornelia M, Potter, John D, Newcomb, Polly A, Schoen, Robert E, Hoffmeister, Michael, Brenner, Hermann, White, Emily, Hsu, Li and Campbell, Peter T (2015) Mendelian randomization study of height and risk of colorectal cancer. International Journal of Epidemiology, 44 2: 662-672. doi:10.1093/ije/dyv082

Mixed model with correction for case-control ascertainment increases association power

Hayeck, Tristan J., Zaitlen, Noah A., Loh, Po-Ru, Vilhjalmsson, Bjarni, Pollack, Samuela, Gusev, Alexander, Yang, Jian, Chen, Guo-Bo, Goddard, Michael E., Visscher, Peter M., Patterson, Nick and Price, Alkes L. (2015) Mixed model with correction for case-control ascertainment increases association power. American Journal of Human Genetics, 96 5: 720-730. doi:10.1016/j.ajhg.2015.03.004

Whole-genome sequence-based analysis of thyroid function

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LD Score regression distinguishes confounding from polygenicity in genome-wide association studies

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Dominance Genetic Variation Contributes Little to the Missing Heritability for Human Complex Traits

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New genetic loci link adipose and insulin biology to body fat distribution

Shungin, Dmitry, Winkler, Thomas W, Croteau-Chonka, Damien C, Ferreira, Teresa, Locke, Adam E, Magi, Reedik, Strawbridge, Rona J, Pers, Tune H, Fischer, Krista, Justice, Anne E, Workalemahu, Tsegaselassie, Wu, Joseph M.W, Buchkovich, Martin L, Heard-Costa, Nancy L, Roman, Tamara S, Drong, Alexander W, Song, Ci, Gustafsson, Stefan, Day, Felix R, Esko, Tonu, Fall, Tove, Kutalik, Zoltan, Luan, Jian'an, Randall, Joshua C, Scherag, Andre, Vedantam, Sailaja, Wood, Andrew R, Chen, Jin, Fehrmann, Rudolf, Karjalainen, Juha, Kahali, Bratati, Liu, Ching-Ti, Schmidt, Ellen M, Absher, Devin, Amin, Najaf, Anderson, Denise, Beekman, Marian, Bragg-Gresham, Jennifer L, Buyske, Steven, Demirkan, Ayse, Ehret, George B, Feitosa, Mary F, Goel, Anuj, Jackson, Anne U, Johnson, Toby, Kleber, Marcus E, Kristiansson, Kati, Mangino, Massimo, Leach, Irene Mateo, Medina-Gomez, Carolina, Palmer, Cameron D, Pasko, Dorota, Pechlivanis, Sonali, Peters, Marjolein J, Prokopenko, Inga, Stanca'kova', Alena, Sung, Yun Ju, Tanaka, Toshiko, Teumer, Alexander, Van Vliet-Ostaptchouk, Jana, Yengo, Loic, Zhang, Weihua, Albrecht, Eva, Arnlov, Johan, Arscott, Gillian M, Bandinelli, Stefania, Barrett, Amy, Bellis, Claire, Bennett, Amanda J, Berne, Christian, Bluher, Matthias, Bohringer, Stefan, Bonnet, Fabrice, Bottcher, Yvonne, Bruinenberg, Marcel, Carba, Delia B, Caspersen, Ida H, Clarke, Robert, Daw, E. 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Biological interpretation of genome-wide association studies using predicted gene functions

Pers, Tune H., Karjalainen, Juha M., Chan, Yingleong, Westra, Harm-Jan, Wood, Andrew R., Yang, Jian, Lui, Julian C., Vedantam, Sailaja, Gustafsson, Stefan, Esko, Tonu, Frayling, Tim, Speliotes, Elizabeth K., Boehnke, Michael, Raychaudhuri, Soumya, Fehrmann, Rudolf S. N., Hirschhorn, Joel N. and Franke, Lude (2015) Biological interpretation of genome-wide association studies using predicted gene functions. Nature Communications, 6 Art No.: 5890: 5890-5890. doi:10.1038/ncomms6890

Mixed model approaches for detecting influential observations in genetic data analysis

Hayat, Yousaf, Yang, Jian and Zhu, Jun (2015) Mixed model approaches for detecting influential observations in genetic data analysis. Pakistan Journal of Statistics, 31 1: 121-134.

Replicability and robustness of genome-wide-association studies for behavioral traits

Rietveld, Cornelius A., Conley, Dalton, Eriksson, Nicholas, Esko, Tonu, Medland, Sarah E., Vinkhuyzen, Anna A. E., Yang, Jian, Boardman, Jason D., Chabris, Christopher F., Dawes, Christopher T., Domingue, Benjamin W., Hinds, David A., Johannesson, Magnus, Kiefer, Amy K., Laibson, David, Magnusson, Patrik K. E., Mountain, Joanna L., Oskarsson, Sven, Rostapshova, Olga, Teumer, Alexander, Tung, Joyce Y., Visscher, Peter M., Benjamin, Daniel J., Cesarini, David and Koellinger, Philipp D. (2014) Replicability and robustness of genome-wide-association studies for behavioral traits. Psychological Science, 25 11: 1975-1986. doi:10.1177/0956797614545132

Defining the role of common variation in the genomic and biological architecture of adult human height

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Another explanation for apparent epistasis: reply

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Multiple associated variants increase the heritability explained for plasma lipids and coronary artery disease

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A rare variant in APOC3 is associated with plasma triglyceride and VLDL levels in Europeans

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The genetic architecture of pediatric cognitive abilities in the Philadelphia Neurodevelopmental Cohort

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Heritability of variation in glycaemic response to metformin: a genome-wide complex trait analysis

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Advantages and pitfalls in the application of mixed-model association methods

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Childhood intelligence is heritable, highly polygenic and associated with FNBP1L

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Genetics of rheumatoid arthritis contributes to biology and drug discovery

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Statistical Power to Detect Genetic (Co)Variance of Complex Traits Using SNP Data in Unrelated Samples

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Inference of the Genetic Architecture Underlying BMI and Height with the Use of 20,240 Sibling Pairs

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Response to 'Predicting the diagnosis of autism spectrum disorder using gene pathway analysis'

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FTO gene, obesity and colon cancer: from epidemiological evidence to laboratory studies

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Additive genetic variation in schizophrenia risk is shared by populations of African and European descent

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DNA evidence for strong genome-wide pleiotropy of cognitive and learning abilities

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Identification of multiple risk variants for ankylosing spondylitis through high-density genotyping of immune-related loci

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Pitfalls of predicting complex traits from SNPs

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GWAS of 126,559 individuals identifies genetic variants associated with educational attainment

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Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders

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Sex-stratified Genome-wide Association Studies Including 270,000 Individuals Show Sexual Dimorphism in Genetic Loci for Anthropometric Traits

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Mitochondrial dysfunction in a novel form of autosomal recessive ataxia

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Ubiquitous polygenicity of human complex traits: genome-wide analysis of 49 traits in Koreans

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Genome-wide association analyses identify multiple loci associated with central corneal thickness and keratoconus

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Estimation of SNP heritability from dense genotype data

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Partitioning the Heritability of Tourette Syndrome and Obsessive Compulsive Disorder Reveals Differences in Genetic Architecture

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Seventy-five genetic loci influencing the human red blood cell

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Estimation of pleiotropy between complex diseases using single-nucleotide polymorphism-derived genomic relationships and restricted maximum likelihood

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Maintenance of genetic variation in human personality: testing evolutionary models by estimating heritability due to common causal variants and investigating the effect of distant inbreeding

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FTO genotype is associated with phenotypic variability of body mass index

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Evidence of inbreeding depression on human height

McQuillan, Ruth, Eklund, Niina, Pirastu, Nicola, Kuningas, Maris, McEvoy, Brian P., Esko, Tonu, Corre, Tanguy, Davies, Gail, Kaakinen, Marika, Lyytikainen, Leo-Pekka, Kristiansson, Kati, Havulinna, Aki S., Gogele, Martin, Vitart, Veronique, Tenesa, Albert, Aulchenko, Yurii, Hayward, Caroline, Johansson, Asa, Boban, Mladen, Ulivi, Sheila, Robino, Antonietta, Boraska, Vesna, Igl, Wilmar, Wild, Sarah H., Zgaga, Lina, Amin, Najaf, Theodoratou, Evropi, Polasek, Ozren, Girotto, Giorgia, Lopez, Lorna M., Sala, Cinzia, Lahti, Jari, Laatikainen, Tiina, Prokopenko, Inga, Kals, Mart, Viikari, Jorma, Yang, Jian, Pouta, Anneli, Estrada, Karol, Hofman, Albert, Freimer, Nelson, Martin, Nicholas G., Kahonen, Mika, Milani, Lili, Heliovaara, Markku, Vartiainen, Erkki, Raikkonen, Katri, Masciullo, Corrado, Starr, John M., Hicks, Andrew A., Esposito, Laura, Kolcic, Ivana, Farrington, Susan M., Oostra, Ben, Zemunik, Tatijana, Campbell, Harry, Kirin, Mirna, Pehlic, Marina, Faletra, Flavio, Porteous, David, Pistis, Giorgio, Widen, Elisabeth, Salomaa, Veikko, Koskinen, Seppo, Fischer, Krista, Lehtimaki, Terho, Heath, Andrew, McCarthy, Mark I., Rivadeneira, Fernando, Montgomery, Grant W., Tiemeier, Henning, Hartikainen, Anna-Liisa, Madden, Pamela A. F., d'Adamo, Pio, Hastie, Nicholas D., Gyllensten, Ulf, Wright, Alan F., van Duijn, Cornelia M., Dunlop, Malcolm, Rudan, Igor, Gasparini, Paolo, Pramstaller, Peter P., Deary, Ian J., Toniolo, Daniela, Eriksson, Johan G., Jula, Antti, Raitakari, Olli T., Metspalu, Andres, Perola, Markus, Jarvelin, Marjo-Riitta, Uitterlinden, Andre, Visscher, Peter M. and Wilson, James F. (2012) Evidence of inbreeding depression on human height. Plos Genetics, 8 7: e1002655. doi:10.1371/journal.pgen.1002655

Statistical method for mapping QTLs for complex traits based on two backcross populations

Zhu, ZhiHong, Hayart, Yousaf, Yang, Jian, Cao, LiYong, Lou, XiangYang and Xu, HaiMing (2012) Statistical method for mapping QTLs for complex traits based on two backcross populations. Chinese Science Bulletin, 57 21: 2645-2654. doi:10.1007/s11434-012-5279-8

Estimating the proportion of variation in susceptibility to schizophrenia captured by common SNPs (vol 44, pg 247, 2012)

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Common SNPs explain some of the variation in the personality dimensions of neuroticism and extraversion (vol 2, e125, 2012)

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Common SNPs explain some of the variation in the personality dimensions of neuroticism and extraversion

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Conditional and joint multiple-SNP analysis of GWAS summary statistics identifies additional variants influencing complex traits

Yang, Jian, Ferreira, Teresa, Morris, Andrew P., Medland, Sarah E., Madden, Pamela A. F., Heath, Andrew C., Martin, Nicholas G., Montgomery, Grant W., Weedon, Michael N., Loos, Ruth J., Frayling, Timothy M., McCarthy, Mark I., Hirschhorn, Joel N., Goddard, Michael E., Visscher, Peter M., Genetic Invest ANthropometric Trai and DIAbet Genetics Replication Meta-A (2012) Conditional and joint multiple-SNP analysis of GWAS summary statistics identifies additional variants influencing complex traits. Nature Genetics, 44 4: 369-375. doi:10.1038/ng.2213

Estimating the proportion of variation in susceptibility to schizophrenia captured by common SNPs

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Genetic contributions to stability and change in intelligence from childhood to old age

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Five years of GWAS discovery

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Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution

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Genome-wide association studies establish that human intelligence is highly heritable and polygenic

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Response to Browning and Browning

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Genomic inflation factors under polygenic inheritance

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Genome partitioning of genetic variation for complex traits using common SNPs

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GCTA: a tool for genome-wide complex trait analysis

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A Commentary on 'Common SNPs Explain a Large Proportion of the Heritability for Human Height' by Yang et al. (2010)

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Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index

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Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution

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From Galton to GWAS: Quantitative genetics of human height

Visscher, Peter M., McEvoy, Brian and Yang, Jian (2010) From Galton to GWAS: Quantitative genetics of human height. Genetics Research, 92 5-6: 371-379. doi:10.1017/S0016672310000571

Corrigendum to: Sporadic cases are the norm for complex disease (European Journal of Human Genetics (2010) 18 (1039-1043) DOI: 10.1038/ejhg.2009.177)

Yang, Jian, Visscher, Peter M. and Wray, Naomi R. (2010) Corrigendum to: Sporadic cases are the norm for complex disease (European Journal of Human Genetics (2010) 18 (1039-1043) DOI: 10.1038/ejhg.2009.177). European Journal of Human Genetics, 18 9: 1044-1044. doi:10.1038/ejhg.2009.233

Sporadic cases are the norm for complex disease

Yang, Jian, Visscher, Peter M. and Wray, Naomi R. (2010) Sporadic cases are the norm for complex disease. European Journal of Human Genetics, 18 9: 1039-1043. doi:10.1038/ejhg.2009.177

Common SNPs explain a large proportion of the heritability for human height

Yang, Jian, Benyamin, Beben, McEvoy, Brian P., Gordon, Scott, Henders, Anjali K., Nyholt, Dale R., Madden, Pamela A., Heath, Andrew C., Martin, Nicholas G., Montgomery, Grant W., Goddard, Michael E. and Visscher, Peter M. (2010) Common SNPs explain a large proportion of the heritability for human height. Nature Genetics, 42 7: 565-569. doi:10.1038/ng.608

QTLNetworkR: an interactive R package for QTL visualization

Zheng, Wen-jun, Yang, Jian and Zhu, Jun (2010) QTLNetworkR: an interactive R package for QTL visualization. Journal of Zhejiang University-Science B, 11 7: 512-515. doi:10.1631/jzus.B0900384

Comparing apples and oranges: Equating the power of case-control and quantitative trait association studies

Yang, Jian, Wray, Naomi R. and Visscher, Peter M. (2010) Comparing apples and oranges: Equating the power of case-control and quantitative trait association studies. Genetic Epidemiology, 34 3: 254-257. doi:10.1002/gepi.20456

The Genetic Interpretation of Area under the ROC Curve in Genomic Profiling

Wray, Naomi R., Yang, Jian, Goddard, Michael E. and Visscher, Peter M. (2010) The Genetic Interpretation of Area under the ROC Curve in Genomic Profiling. PLoS Genetics, 6 2: e1000864.1-e1000864.9. doi:10.1371/journal.pgen.1000864

Uncovering genetic regulatory network divergence between duplicate genes using yeast eQTL landscape

Zou, Yangyun, Su, Zhixi, Yang, Jian, Zeng, Yanwu and Gu, Xun (2009) Uncovering genetic regulatory network divergence between duplicate genes using yeast eQTL landscape. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 312B 7: 722-733. doi:10.1002/jez.b.21290

Identifying differentially expressed genes in human acute leukemia and mouse brain microarray datasets utilizing QTModel

Yang, Jian, Zou, Yangyun and Zhu, Jun (2009) Identifying differentially expressed genes in human acute leukemia and mouse brain microarray datasets utilizing QTModel. Functional & Integrative Genomics, 9 1: 59-66. doi:10.1007/s10142-008-0096-5

Influence of outliers on QTL mapping for complex traits

Hayat, Yousaf, Yang, Jian, Xu, Hai-ming and Zhu, Jun (2008) Influence of outliers on QTL mapping for complex traits. Journal of Zhejiang University-Science B, 9 12: 931-937. doi:10.1631/jzus.B0820045

Mapping interspecific genetic architecture in a host-parasite interaction system

Yang, Jian, Wu, Weiren and Zhu, Jun (2008) Mapping interspecific genetic architecture in a host-parasite interaction system. Genetics, 178 3: 1737-1743. doi:doi:10.1534/genetics.107.081430

QTLNetwork: mapping and visualizing genetic architecture of complex traits in experimental populations

Yang, Jian, Hu, Chengcheng, Hu, Han, Yu, Rongdong, Xia, Zhen, Ye, Xiuzi and Zhu, Jun (2008) QTLNetwork: mapping and visualizing genetic architecture of complex traits in experimental populations. Bioinformatics, 24 5: 721-723. doi:10.1093/bioinformatics/btm494

Genetic analysis of grain yield conditioned on its component traits in rice (Oryza sativa L.)

Liu, G. F., Yang, J., Xu, H. M., Hayat, Y. and Zhu, J. (2008) Genetic analysis of grain yield conditioned on its component traits in rice (Oryza sativa L.). Australian Journal of Agricultural Research, 59 2: 189-195. doi:10.1071/AR07163

Influence of Epistasis and QTL × Environment Interaction on Heading Date of Rice (Oryza sativa L.)

Liu, Guifu, Yang, Jian, Xu, Haiming and Zhu, Jun (2007) Influence of Epistasis and QTL × Environment Interaction on Heading Date of Rice (Oryza sativa L.). Journal of Genetics and Genomics, 34 7: 608-615. doi:10.1016/S1673-8527(07)60069-1

Analysis of Genetic Effects of Nuclear-Cytoplasmic Interaction on Quantitative Traits: Genetic Model for Diploid Plants

Han, Lide, Yang, Jian and Zhu, Jun (2007) Analysis of Genetic Effects of Nuclear-Cytoplasmic Interaction on Quantitative Traits: Genetic Model for Diploid Plants. Journal of Genetics and Genomics, 34 6: 562-568. doi:10.1016/S1673-8527(07)60062-9

Mapping the genetic architecture of complex traits in experimental populations

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3D graphical visualization of the genetic architectures underlying complex traits in multiple environments

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Genetic analysis on tiller number and plant height per plant in rice (Oryza sativa L.)

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Mapping QTL for Biomass Yield and Its Components in Rice (Oryza sativa L.)

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Methods for predicting superior genotypes under multiple environments based on QTL effects

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Association between population density and genetic risk for schizophrenia

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Signatures of negative selection in the genetic architecture of human complex traits

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Evidence for genetic overlap between schizophrenia and maternal age at first birth

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Additive genetic variation in risk to schizophrenia across African American and European American populations

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Single-chip RF CMOS UMTS/EGSM transceiver with integrated receive diversity and GPS

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