The University of Queensland

Toward plant defense mechanisms against root pathogens

Fallath, Thorya, Rosli, Ahmad Bin, Kidd, Brendan, Carvalhais, Lilia C. and Schenk, Peer M. (2017). Toward plant defense mechanisms against root pathogens. In Agriculturally Important Microbes for Sustainable Agriculture (pp. 293-312) Gateway East, Singapore : Springer Singapore. doi:10.1007/978-981-10-5343-6_10

Soil microbial community interactions under tillage systems in Australia

Rincon-Florez, Vivian A., Carvalhais, Lilia C., Dang, Yash P. and Schenk, Peer M. (2016). Soil microbial community interactions under tillage systems in Australia. In Khalid Rehman Hakeem, Mohd Sayeed Akhtar and Siti Nor Akmar Abdullah (Ed.), Plant, Soil and Microbes: Volume 1: Implications in Crop Science (pp. 93-102) Cham, Switzerland: Springer. doi:10.1007/978-3-319-27455-3_5

Nutraceuticals from microalgae

Alsenani, Faisal, Ahmed, Faruq and Schenk, Peer M. (2015). Nutraceuticals from microalgae. In Debasis Bagchi, Harry G. Preuss and Anand Swaroop (Ed.), Nutraceuticals and functional foods in human health and disease prevention (pp. 673-684) Boca Raton, FL, United States: CRC Press. doi:10.1201/b19308

Transcriptomics of plants interacting with pathogens and beneficial microbes

Mirzaee, Hooman, Shuey, Louise and Schenk, Peer M. (2015). Transcriptomics of plants interacting with pathogens and beneficial microbes. In Debasis Bagchi, Anand Swaroop and Manashi Bagchi (Ed.), Genomics, proteomics and metabolomics in nutraceuticals and functional foods Second edition ed. (pp. 527-536) Chichester, West Sussex, United Kingdom: John Wiley & Sons. doi:10.1002/9781118930458.ch41

Rapid cloning of genes and promoters for functional analyses

Schenk, Peer M. (2014). Rapid cloning of genes and promoters for functional analyses. In Agnelo Furtado and Robert J. Henry (Ed.), Cereal Genomics: Methods and Protocols (pp. 123-132) New York, United States: Humana Press. doi:10.1007/978-1-62703-715-0_11

Soil functional gene microarrays and applications in plant-microbe interactions

Carvalhais, Lilia C., Rincon-Florez, Vivian and Schenk, Peer M. (2014). Soil functional gene microarrays and applications in plant-microbe interactions. In Zhili He (Ed.), Microarrays: current technology, innovations and applications (pp. 169-180) Norfolk, United Kingdom: Caister Academic Press.

Transcriptome analysis of induced resistance

Kidd, Brendan, Kazan, Kemal and Schenk, Peer M. (2014). Transcriptome analysis of induced resistance. In Dale R. Walters, Adrian C. Newton and Gary D. Lyon (Ed.), Induced Resistance for Plant Defense: A Sustainable Approach to Crop Protection 2nd ed. (pp. 41-57) Chichester, West Sussex, United Kingdom: John Wiley & Sons. doi:10.1002/9781118371848.ch3

Microalgae isolation and selection for prospective biodiesel production

Duong, Van Thang, Li, Yan, Nowak, Ekaterina and Schenk, Peer M. (2013). Microalgae isolation and selection for prospective biodiesel production. In Barnabas Gikonyo (Ed.), Advances in Biofuel Production: Algae and Aquatic Plants (pp. 257-276) Toronto, ON, Canada: Apple Academic Press. doi:10.1201/b16341

Microalgae: a valuable source of natural carotenoids with potential health benefits

Ahmed, Faruq, Fanning, Kent, Schuhmann, Holger, Netzel, Michael and Schenk, Peer M. (2013). Microalgae: a valuable source of natural carotenoids with potential health benefits. In Masayoshi Yamaguchi (Ed.), Carotenoids: Food Sources, Production and Health Benefits (pp. 143-164) Hauppauge, NY, USA: Nova Science Publishers.

Physiology, biochemistry and genetics of microalgal growth and lipid production

Schuhmann, Holger and Schenk, Peer M. (2013). Physiology, biochemistry and genetics of microalgal growth and lipid production. In Bharat P. Singh (Ed.), Biofuel crops: production, physiology and genetics (pp. 54-83) Wallingford, Oxfordshire, United Kingdom: CABI Publishing. doi:10.1079/9781845938857.0054

Rhizosphere Metatranscriptomics: Challenges and Opportunities

Carvalhais, Lilia C., Dennis, Paul G., Tyson, Gene W. and Schenk, Peer M. (2013). Rhizosphere Metatranscriptomics: Challenges and Opportunities. In Frans J. de Bruijn (Ed.), Molecular Microbial Ecology of the Rhizosphere (pp. 1137-1144) Hoboken, NJ United States: Wiley-Blackwell. doi:10.1002/9781118297674.ch109

The role of transcription factors in wheat under different abiotic stresses

Rahaie, Mahdi, Xue, Gang-Ping and Schenk, Peer M. (2013). The role of transcription factors in wheat under different abiotic stresses. In Kourosh Vahdati and Charles Leslie (Ed.), Abiotic stress - plant responses and applications in agriculture (pp. 367-385) Rijeka, Croatia: InTech. doi:10.5772/54795

Proteomics and metabolomics of Musa

Dinh, Hoang Lan Chi and Schenk, Peer M. (2012). Proteomics and metabolomics of Musa. In Genetics, genomics, and breeding of bananas (pp. 181-193) Boca Raton, FL, United States: CRC Press. doi:10.1201/b11776

Isolation of mRNA from environmental microbial communities for metatranscriptomic analyses

Schenk, Peer M. (2011). Isolation of mRNA from environmental microbial communities for metatranscriptomic analyses. In Frans J. de Bruijn (Ed.), Metagenomics and Complementary Approaches (pp. 569-574) Hoboken, NJ, U.S.A.: John Wiley & Sons. doi:10.1002/9781118010518.ch62

Isolation of mRNA from environmental microbial communities for metatranscriptomic analyses

Schenk, Peer M. (2011). Isolation of mRNA from environmental microbial communities for metatranscriptomic analyses. In Frans J.de Bruijn (Ed.), Handbook of molecular microbial ecology I: Metagenomics and complementary approaches (pp. 569-574) Hoboken, NJ, United States: Wiley-Blackwell.

Genomics in induced resistance

Kazan, K. and Schenk, P. M. (2007). Genomics in induced resistance. In Walters, D., Newton, A. and Lyon, G. (Ed.), Induced Resistance for Plant Defence (pp. 31-64) Oxford, United Kingdom: Blackwell Publishing.

Chromosome-scale genome assembly of two Australian Nannochloropsis oceanica isolates exhibiting superior lipid characteristics

Brown, Reuben B., Wass, Taylor J., Thomas-Hall, Skye R. and Schenk, Peer M. (2019) Chromosome-scale genome assembly of two Australian Nannochloropsis oceanica isolates exhibiting superior lipid characteristics. Microbiology Resource Announcements, 8 48: . doi:10.1128/mra.01288-19

Soil bacterial diffusible and volatile organic compounds inhibit Phytophthora capsici and promote plant growth

Syed-Ab-Rahman, Sharifah Farhana, Carvalhais, Lilia C., Chua, Elvis T., Chung, Fong Yi, Moyle, Peter M., Eltanahy, Eladl G. and Schenk, Peer M. (2019) Soil bacterial diffusible and volatile organic compounds inhibit Phytophthora capsici and promote plant growth. Science of the Total Environment, 692 267-280. doi:10.1016/j.scitotenv.2019.07.061

Phaeodactylum tricornutum microalgae as a rich source of omega-3 rich oil: progress in lipid induction techniques towards industry adoption

Cui, Yi, Thomas-Hall, Skye R. and Schenk, Peer M. (2019) Phaeodactylum tricornutum microalgae as a rich source of omega-3 rich oil: progress in lipid induction techniques towards industry adoption. Food Chemistry, 297 124937. doi:10.1016/j.foodchem.2019.06.004

Relationship between the molecular structure of duckweed starch and its in vitro enzymatic degradation kinetics

de Souza Moretti, Marcia Maria, Yu, Wenwen, Zou, Wei, Franco, Célia Maria Landi, Albertin, Liliane Lazzari, Schenk, Peer M. and Gilbert, Robert G. (2019) Relationship between the molecular structure of duckweed starch and its in vitro enzymatic degradation kinetics. International Journal of Biological Macromolecules, 139 244-251. doi:10.1016/j.ijbiomac.2019.07.206

Impact of osmotic shock pre-treatment on microalgae lipid extraction and subsequent methane production

González-González, Lina María, Astals, Sergi, Pratt, Steven, Jensen, Paul D. and Schenk, Peer M. (2019) Impact of osmotic shock pre-treatment on microalgae lipid extraction and subsequent methane production. Bioresource Technology Reports, 7 . doi:10.1016/j.biteb.2019.100214

Mixotrophic cultivation of Scenedesmus dimorphus in sugarcane bagasse hydrolysate

Manzoor, Maleeha, Ahmad, Qurat-ul-Ain, Aslam, Ambreen, Jabeen, Faiza, Rasul, Azhar, Schenk, Peer M. and Qazi, Javed I. (2019) Mixotrophic cultivation of Scenedesmus dimorphus in sugarcane bagasse hydrolysate. Environmental Progress and Sustainable Energy, . doi:10.1002/ep.13334

Assessing the fertilizing potential of microalgal digestates using the marine diatom Chaetoceros muelleri

González-González, Lina M., Eltanahy, Eladl and Schenk, Peer M. (2019) Assessing the fertilizing potential of microalgal digestates using the marine diatom Chaetoceros muelleri. Algal Research, 41 101534. doi:10.1016/j.algal.2019.101534

Global mapping of cost‐effective microalgal biofuel production areas with minimal environmental impact

Correa, Diego F., Beyer, Hawthorne L., Possingham, Hugh P., Thomas‐Hall, Skye R. and Schenk, Peer M. (2019) Global mapping of cost‐effective microalgal biofuel production areas with minimal environmental impact. GCB Bioenergy, 11 8: 914-929. doi:10.1111/gcbb.12619

Heavy metal bioremediation of coal-fired flue gas using microalgae under different CO2 concentrations

Aslam, Ambreen, Thomas-Hall, Skye R., Mughal, Tahira, Zaman, Qamar-uz, Ehsan, Nusrat, Javied, Sabiha and Schenk, Peer M. (2019) Heavy metal bioremediation of coal-fired flue gas using microalgae under different CO2 concentrations. Journal of Environmental Management, 241 243-250. doi:10.1016/j.jenvman.2019.03.118

The AtHSP17.4C1 gene expression is mediated by diverse signals that link biotic and abiotic stress factors with ROS and can be a useful molecular marker for oxidative stress

Sewelam, Nasser, Kazan, Kemal, Huedig, Meike, Maurino, Veronica G. and Schenk, Peer M. (2019) The AtHSP17.4C1 gene expression is mediated by diverse signals that link biotic and abiotic stress factors with ROS and can be a useful molecular marker for oxidative stress. International Journal of Molecular Sciences, 20 13: 3201. doi:10.3390/ijms20133201

Towards the implementation of sustainable biofuel production systems

Correa, Diego F., Beyer, Hawthorne L., Fargione, Joseph E., Hill, Jason D., Possingham, Hugh P., Thomas-Hall, Skye R. and Schenk, Peer M. (2019) Towards the implementation of sustainable biofuel production systems. Renewable and Sustainable Energy Reviews, 107 250-263. doi:10.1016/j.rser.2019.03.005

Soil amendments with ethylene precursor alleviate negative impacts of salinity on soil microbial properties and productivity

Liu, Hongwei, Khan, Muhammad Yahya, Carvalhais, Lilia C., Delgado-Baquerizo, Manuel, Yan, Lijuan, Crawford, Mark, Dennis, Paul G., Singh, Brajesh and Schenk, Peer M. (2019) Soil amendments with ethylene precursor alleviate negative impacts of salinity on soil microbial properties and productivity. Scientific Reports, 9 1: . doi:10.1038/s41598-019-43305-4

Introducing the hydrate gel membrane technology for filtration of mine tailings

Liu, Di, Edraki, Mansour, Malekizadeh, Ali, Schenk, Peer M. and Berry, Luke (2019) Introducing the hydrate gel membrane technology for filtration of mine tailings. Minerals Engineering, 135 1-8. doi:10.1016/j.mineng.2019.02.030

Sugarcane bagasse as a novel low/no cost organic carbon source for growth of Chlorella sp. BR2

Manzoor, Maleeha, Jabeen, Faiza, Thomas-Hall, Skye R., Altaf, Javaria, Younis, Tahira, Schenk, Peer M. and Qazi, Javed Iqbal (2019) Sugarcane bagasse as a novel low/no cost organic carbon source for growth of Chlorella sp. BR2. Biofuels, . doi:10.1080/17597269.2019.1580970

Complete genome sequence of Achromobacter spanius UQ283, a soilborne isolate exhibiting plant growth-promoting properties

Wass, Taylor J., Syed-Ab-Rahman, Sharifah Farhana, Carvalhais, Lilia C., Ferguson, Brett J. and Schenk, Peer M. (2019) Complete genome sequence of Achromobacter spanius UQ283, a soilborne isolate exhibiting plant growth-promoting properties. Microbiology Resource Announcements, 8 16: . doi:10.1128/mra.00236-19

Suppression of Phytophthora capsici infection and promotion of tomato growth by soil bacteria

Syed-Ab-Rahman, Sharifah Farhana, Xiao, Yawen, Carvalhais, Lilia C., Ferguson, Brett J. and Schenk, Peer M. (2019) Suppression of Phytophthora capsici infection and promotion of tomato growth by soil bacteria. Rhizosphere, 9 72-75. doi:10.1016/j.rhisph.2018.11.007

The ability of plants to produce strigolactones affects rhizosphere community composition of fungi but not bacteria

Carvalhais, Lilia C., Rincon-Florez, Vivian A., Brewer, Philip B., Beveridge, Christine A., Dennis, Paul G. and Schenk, Peer M. (2019) The ability of plants to produce strigolactones affects rhizosphere community composition of fungi but not bacteria. Rhizosphere, 9 18-26. doi:10.1016/j.rhisph.2018.10.002

The ionic liquid cholinium arginate is an efficient solvent for extracting high-value Nannochloropsis sp. lipids

Chua, Elvis T., Brunner, Manuel, Atkin, Rob, Eltanahy, Eladl, Thomas-Hall, Skye R. and Schenk, Peer M. (2019) The ionic liquid cholinium arginate is an efficient solvent for extracting high-value Nannochloropsis sp. lipids. ACS Sustainable Chemistry and Engineering, 7 2: 2538-2544. doi:10.1021/acssuschemeng.8b05448

Transcriptome-wide analysis of Chlorella reveals auxin-induced carotenogenesis pathway in green microalgae

Alsenani, Faisal, Wass, Taylor J., Ma, Ruijuan, Eltanahy, Eladl, Netzel, Michael E. and Schenk, Peer M. (2019) Transcriptome-wide analysis of Chlorella reveals auxin-induced carotenogenesis pathway in green microalgae. Algal Research, 37 320-335. doi:10.1016/j.algal.2018.12.002

Blue light enhances astaxanthin biosynthesis metabolism and extraction efficiency in Haematococcus pluvialis by inducing haematocyst germination

Ma, Ruijuan, Thomas-Hall, Skye R., Chua, Elvis T., Eltanahy, Eladl, Netzel, Michael E., Netzel, Gabriele, Lu, Yinghua and Schenk, Peer M. (2018) Blue light enhances astaxanthin biosynthesis metabolism and extraction efficiency in Haematococcus pluvialis by inducing haematocyst germination. Algal Research, 35 215-222. doi:10.1016/j.algal.2018.08.023

Identification of soil bacterial isolates suppressing different Phytophthora spp. and promoting plant growth

Syed-Ab-Rahman, Sharifah Farhana, Carvalhais, Lilia C., Chua, Elvis, Xiao, Yawen, Wass, Taylor J. and Schenk, Peer M. (2018) Identification of soil bacterial isolates suppressing different Phytophthora spp. and promoting plant growth. Frontiers in Plant Science, 9 . doi:10.3389/fpls.2018.01502

Efficient harvesting of Nannochloropsis microalgae via optimized chitosan-mediated flocculation

Chua, Elvis T., Eltanahy, Eladl, Jung, Heejae, Uy, Manuel, Thomas-Hall, Skye R. and Schenk, Peer M. (2018) Efficient harvesting of Nannochloropsis microalgae via optimized chitosan-mediated flocculation. Global Challenges, 1800038. doi:10.1002/gch2.201800038

Biogas production coupled to repeat microalgae cultivation using a closed nutrient loop

González-González, Lina María, Zhou, Lihong, Astals, Sergi, Thomas-Hall, Skye R., Eltanahy, Eladl, Pratt, Steven, Jensen, Paul D. and Schenk, Peer M. (2018) Biogas production coupled to repeat microalgae cultivation using a closed nutrient loop. Bioresource Technology, 263 625-630. doi:10.1016/j.biortech.2018.05.039

Activation of the salicylic acid signalling pathway in wheat had no significant short-term impact on the diversity of root-associated microbiomes

Liu, Hongwei, Carvalhais, Lilia C., Schenk, Peer M. and Dennis, Paul G. (2018) Activation of the salicylic acid signalling pathway in wheat had no significant short-term impact on the diversity of root-associated microbiomes. Pedobiologia, . doi:10.1016/j.pedobi.2018.08.001

LED power efficiency of biomass, fatty acid, and carotenoid production in Nannochloropsis microalgae

Ma, Ruijuan, Thomas-Hall, Skye R., Chua, Elvis T., Eltanahy, Eladl, Netzel, Michael E., Netzel, Gabriele, Lu, Yinghua and Schenk, Peer M (2018) LED power efficiency of biomass, fatty acid, and carotenoid production in Nannochloropsis microalgae. Bioresource Technology, 252 118-126. doi:10.1016/j.biortech.2017.12.096

Analysis of the Complete Genome Sequence ofStrain K

Moyle, Richard, Pretorius, Lara-Simone, Shuey, Louise S., Nowak, Ekaterina and Schenk, Peer M. (2018) Analysis of the Complete Genome Sequence ofStrain K. Genome Announcements, 6 7: 1-2. doi:10.1128/genomeA.00053-18

Emerging microbial biocontrol strategies for plant pathogens

Syed Ab Rahman, Sharifah Farhana, Singh, Eugenie, Pieterse, Corné M.J. and Schenk, Peer M. (2018) Emerging microbial biocontrol strategies for plant pathogens. Plant Science, 267 102-111. doi:10.1016/j.plantsci.2017.11.012

Mixed microalgae consortia growth under higher concentration of CO2 from unfiltered coal fired flue gas: Fatty acid profiling and biodiesel production

Aslam, Ambreen, Thomas-Hall, Skye R., Manzoor, Maleeha, Jabeen, Faiza, Iqbal, Munawar, Uz Zaman, Qamar, Schenk, Peer M. and Asif Tahir, M. (2018) Mixed microalgae consortia growth under higher concentration of CO2 from unfiltered coal fired flue gas: Fatty acid profiling and biodiesel production. Journal of Photochemistry and Photobiology. B, Biology, 179 126-133. doi:10.1016/j.jphotobiol.2018.01.003

Inner plant values: Diversity, colonization and benefits from endophytic bacteria

Liu, Hongwei, Carvalhais, Lilia C., Crawford, Mark, Singh, Eugenie, Dennis, Paul G., Pieterse, Corné M.J. and Schenk, Peer M. (2017) Inner plant values: Diversity, colonization and benefits from endophytic bacteria. Frontiers in Microbiology, 8 DEC: 2552. doi:10.3389/fmicb.2017.02552

High flux water purification using aluminium hydroxide hydrate gels

Malekizadeh, Ali and Schenk, Peer M (2017) High flux water purification using aluminium hydroxide hydrate gels. Scientific reports, 7 1: 1-13. doi:10.1038/s41598-017-17741-z

Gene expression profiling of astaxanthin and fatty acid pathways in Haematococcus pluvialis in response to different LED lighting conditions

Ma, Ruijuan, Thomas-Hall, Skye R., Chua, Elvis T., Alsenani, Faisal, Eltanahy, Eladl, Netzel, Michael E., Netzel, Gabriele, Lu, Yinghua and Schenk, Peer M. (2017) Gene expression profiling of astaxanthin and fatty acid pathways in Haematococcus pluvialis in response to different LED lighting conditions. Bioresource Technology, 250 591-602. doi:10.1016/j.biortech.2017.11.094

Complete Nucleotide Sequence of Australian Tomato spotted wilt virus Isolate TSWV-QLD2

Moyle, Richard L, Pretorius, Lara, Carvalhais, Lilia C and Schenk, Peer M (2017) Complete Nucleotide Sequence of Australian Tomato spotted wilt virus Isolate TSWV-QLD2. Genome announcements, 5 47: 1-2. doi:10.1128/genomeA.01267-17

A biorefinery for Nannochloropsis: induction, harvesting, and extraction of EPA-rich oil and high-value protein

Chua, Elvis T. and Schenk, Peer M. (2017) A biorefinery for Nannochloropsis: induction, harvesting, and extraction of EPA-rich oil and high-value protein. Bioresource Technology, 244 Pt 2: 1416-1424. doi:10.1016/j.biortech.2017.05.124

First fully sequenced genome of an Australian isolate of Cauliflower mosaic virus

Pretorius, Lara, Moyle, Richard L., Dalton-Morgan, Jessica, Schwinghamer, Mark W., Crew, Kathy, Schenk, Peer M. and Geering, Andrew D. W. (2017) First fully sequenced genome of an Australian isolate of Cauliflower mosaic virus. Australasian Plant Pathology, 46 6: 597-599. doi:10.1007/s13313-017-0520-1

Integrated biodiesel and biogas production from microalgae: Towards a sustainable closed loop through nutrient recycling

González-González, Lina María, Correa, Diego F., Ryan, Stephen, Jensen, Paul D., Pratt, Steven and Schenk, Peer M. (2017) Integrated biodiesel and biogas production from microalgae: Towards a sustainable closed loop through nutrient recycling. Renewable and Sustainable Energy Reviews, 82 1137-1148. doi:10.1016/j.rser.2017.09.091

An Optimized Transient Dual Luciferase Assay for Quantifying MicroRNA Directed Repression of Targeted Sequences

Moyle, Richard L., Carvalhais, Lilia C., Pretorius, Lara-Simone, Nowak, Ekaterina, Subramaniam, Gayathery, Dalton-Morgan, Jessica and Schenk, Peer M. (2017) An Optimized Transient Dual Luciferase Assay for Quantifying MicroRNA Directed Repression of Targeted Sequences. Frontiers in Plant Science, 8 1631. doi:10.3389/fpls.2017.01631

Tiny Microbes, Big Yields: enhancing food crop production with biological solutions

Trivedi, Pankaj, Schenk, Peer M., Wallenstein, Matthew D. and Singh, Brajesh K. (2017) Tiny Microbes, Big Yields: enhancing food crop production with biological solutions. Microbial Biotechnology, 10 5: 999-1003. doi:10.1111/1751-7915.12804

Biodiversity impacts of bioenergy production: microalgae vs. first generation biofuels

Correa, Diego F., Beyer, Hawthorne L., Possingham, Hugh P., Thomas-Hall, Skye R. and Schenk, Peer M. (2017) Biodiversity impacts of bioenergy production: microalgae vs. first generation biofuels. Renewable and Sustainable Energy Reviews, 74 1131-1146. doi:10.1016/j.rser.2017.02.068

UV–C radiation increases sterol production in the microalga Pavlova lutheri

Ahmed, Faruq and Schenk, Peer M. (2017) UV–C radiation increases sterol production in the microalga Pavlova lutheri. Phytochemistry, 139 25-32. doi:10.1016/j.phytochem.2017.04.002

Functional metabolomics as a tool to analyze Mediator function and structure in plants

Davoine, Celine, Abreu, Ilka N., Khajeh, Khalil, Blomberg, Jeanette, Kidd, Brendan N., Kazan, Kemal, Schenk, Peer M., Gerber, Lorenz, Nilsson, Ove, Moritz, Thomas and Bjorklund, Stefan (2017) Functional metabolomics as a tool to analyze Mediator function and structure in plants. Plos One, 12 6: e0179640-e0179640. doi:10.1371/journal.pone.0179640

RNA-Seq and metabolic flux analysis of Tetraselmis sp. M8 during nitrogen starvation reveals a two-stage lipid accumulation mechanism

Lim, David K. Y., Schuhmann, Holger, Thomas-Hall, Skye R., Chan, Kenneth C. K., Wass, Taylor J., Aguilera, Felipe, Adarme-Vega, T. Catalina, Dal'Molin, Cristiana G. O., Thorpe, Glen J., Batley, Jacqueline, Edwards, David and Schenk, Peer M. (2017) RNA-Seq and metabolic flux analysis of Tetraselmis sp. M8 during nitrogen starvation reveals a two-stage lipid accumulation mechanism. Bioresource Technology, 244 Pt 2: 1281-1293. doi:10.1016/j.biortech.2017.06.003

Jasmonic acid signalling and the plant holobiont

Carvalhais, Lilia C., Schenk, Peer M. and Dennis, Paul G. (2017) Jasmonic acid signalling and the plant holobiont. Current Opinion in Microbiology, 37 42-47. doi:10.1016/j.mib.2017.03.009

Selection and adaptation of microalgae to growth in 100% unfiltered coal-fired flue gas

Aslam, Ambreen, Thomas-Hall, Skye R., Mughal, Tahira Aziz and Schenk, Peer M. (2017) Selection and adaptation of microalgae to growth in 100% unfiltered coal-fired flue gas. Bioresource Technology, 233 271-283. doi:10.1016/j.biortech.2017.02.111

MEDIATOR18 and MEDIATOR20 confer susceptibility to Fusarium oxysporum in Arabidopsis thaliana

Fallath, Thorya, Kidd, Brendan N., Stiller, Jiri, Davoine, Celine, Bjorklund, Stefan, Manners, John M., Kazan, Kemal and Schenk, Peer M. (2017) MEDIATOR18 and MEDIATOR20 confer susceptibility to Fusarium oxysporum in Arabidopsis thaliana. Plos One, 12 4: e0176022. doi:10.1371/journal.pone.0176022

Strategic tillage in conservation agricultural systems of north-eastern Australia: why, where, when and how?

Dang, Yash Pal, Balzer, Anna, Crawford, Mark, Rincon-Florez, Vivian, Liu, Hongwei, Melland, Alice Rowena, Antille, Diogenes, Kodur, Shreevatsa, Bell, Michael John, Whish, Jeremey Patrick Milroy, Lai, Yunru, Seymour, Nikki, Carvalhais, Lilia Costa and Schenk, Peer (2017) Strategic tillage in conservation agricultural systems of north-eastern Australia: why, where, when and how?. Environmental Science and Pollution Research, 25 2: 1-16. doi:10.1007/s11356-017-8937-1

Effects of jasmonic acid signalling on the wheat microbiome differ between body sites

Liu, Hongwei, Carvalhais, Lilia C., Schenk, Peer M. and Dennis, Paul G. (2017) Effects of jasmonic acid signalling on the wheat microbiome differ between body sites. Scientific Reports, 7 1: 41766. doi:10.1038/srep41766

Lipid extraction from wet Chaetoceros muelleri culture and evaluation of remaining defatted biomass

Naghdi, Forough Ghasemi, Bai, Xue, Thomas-Hall, Skye R., Sharma, Kalpesh and Schenk, Peer M. (2016) Lipid extraction from wet Chaetoceros muelleri culture and evaluation of remaining defatted biomass. Algal Research, 20 205-212. doi:10.1016/j.algal.2016.10.011

Complete nucleotide sequence of an Australian isolate of Turnip mosaic virus before and after seven years of serial passaging

Pretorius, Lara, Moyle, Richard L., Dalton-Morgan, Jessica, Hussein, Nasser and Schenk, Peer M. (2016) Complete nucleotide sequence of an Australian isolate of Turnip mosaic virus before and after seven years of serial passaging. Genome Announcements, 4 6: . doi:10.1128/genomeA.01269-16

Analysis of the first complete genome sequence of an Australian tomato spotted wilt virus isolate

Moyle, Richard, Pretorius, Lara-Simone, Dalton-Morgan, Jessica, Persley, Denis and Schenk, Peer (2016) Analysis of the first complete genome sequence of an Australian tomato spotted wilt virus isolate. Australasian Plant Pathology, 45 5: 509-512. doi:10.1007/s13313-016-0435-2

Dissolved air flotation and centrifugation as methods for oil recovery from ruptured microalgal cells

Ghasemi Naghdi, Forough and Schenk, Peer M. (2016) Dissolved air flotation and centrifugation as methods for oil recovery from ruptured microalgal cells. Bioresource Technology, 218 428-435. doi:10.1016/j.biortech.2016.06.093

Strategic tillage increased the relative abundance of Acidobacteria but did not impact on overall soil microbial properties of a 19-year no-till Solonetz

Liu, Hongwei, Carvalhais, Lilia C., Crawford, Mark, Dang, Yash P., Dennis, Paul G. and Schenk, Peer M. (2016) Strategic tillage increased the relative abundance of Acidobacteria but did not impact on overall soil microbial properties of a 19-year no-till Solonetz. Biology and Fertility of Soils, 52 7: 1021-1035. doi:10.1007/s00374-016-1138-0

Comparison of microalgae cultivation in photobioreactor, open raceway pond, and a two-stage hybrid system

Narala, Rakesh R., Garg, Sourabh, Sharma, Kalpesh K., Thomas-Hall, Skye R., Deme, Miklos, Li, Yan and Schenk, Peer M. (2016) Comparison of microalgae cultivation in photobioreactor, open raceway pond, and a two-stage hybrid system. Frontiers in Energy Research, 4 AUG: 1-10. doi:10.3389/fenrg.2016.00029

Progress on lipid extraction from wet algal biomass for biodiesel production

Ghasemi Naghdi, Forough, Gonzalez Gonzalez, Lina M., Chan, William and Schenk, Peer M. (2016) Progress on lipid extraction from wet algal biomass for biodiesel production. Microbial Biotechnology, 9 6: 718-726. doi:10.1111/1751-7915.12360

Development of marker genes for jasmonic acid signaling in shoots and roots of wheat

Liu, Hongwei, Carvalhais, Lilia Costa, Kazan, Kemal and Schenk, Peer M. (2016) Development of marker genes for jasmonic acid signaling in shoots and roots of wheat. Plant Signaling and Behavior, 11 5: . doi:10.1080/15592324.2016.1176654

One-time strategic tillage does not cause major impacts on soil microbial properties in a no-till Calcisol

Liu, Hongwei, Carvalhais, Lilia C., Rincon-Florez, Vivian, Crawford, Mark, Dang, Yash P., Dennis, Paul G. and Schenk, Peer M. (2016) One-time strategic tillage does not cause major impacts on soil microbial properties in a no-till Calcisol. Soil and Tillage Research, 158 91-99. doi:10.1016/j.still.2015.12.007

Short-term impact of an occasional tillage on microbial communities in a Vertosol after 43 years of no-tillage or conventional tillage

Rincon-Florez, Vivian A., Ng, Clement, Dang, Yash P., Schenk, Peer M. and Carvalhais, Lilia C. (2016) Short-term impact of an occasional tillage on microbial communities in a Vertosol after 43 years of no-tillage or conventional tillage. European Journal of Soil Biology, 74 32-38. doi:10.1016/j.ejsobi.2016.03.001

Strategic tillage on a Grey Vertosol after fifteen years of no-till management had no short-term impact on soil properties and agronomic productivity

Liu, Hongwei, Crawford, Mark, Carvalhais, Lilia C., Dang, Yash P., Dennis, Paul G. and Schenk, Peer M. (2016) Strategic tillage on a Grey Vertosol after fifteen years of no-till management had no short-term impact on soil properties and agronomic productivity. Geoderma, 267 146-155. doi:10.1016/j.geoderma.2016.01.002

Global plant stress signaling: reactive oxygen species at the cross-road

Sewelam, Nasser, Kazan, Kemal and Schenk, Peer M. (2016) Global plant stress signaling: reactive oxygen species at the cross-road. Frontiers in Plant Science, 7 FEB2016: 187. doi:10.3389/fpls.2016.00187

New feed sources key to ambitious climate targets

Walsh, Brian J., Rydzak, Felicjan, Palazzo, Amanda, Kraxner, Florian, Herrero, Mario, Schenk, Peer M., Ciais, Philippe, Janssens, Ivan A., Penuelas, Josep, Niederl-Schmidinger, Anneliese and Obersteiner, Michael (2015) New feed sources key to ambitious climate targets. Carbon Balance and Management, 10 26: 26. doi:10.1186/s13021-015-0040-7

Flotation separation of marine microalgae from aqueous medium

Garg, Sourabh, Wang, Liguang and Schenk, Peer M. (2015) Flotation separation of marine microalgae from aqueous medium. Separation and Purification Technology, 156 636-641. doi:10.1016/j.seppur.2015.10.059

Comparison of astaxanthin accumulation and biosynthesis gene expression of three Haematococcus pluvialis strains upon salinity stress

Gao, Zhengquan, Meng, Chunxiao, Chen, Yi Chung, Ahmed, Faruq, Mangott, Arnold, Schenk, Peer M. and Li, Yan (2015) Comparison of astaxanthin accumulation and biosynthesis gene expression of three Haematococcus pluvialis strains upon salinity stress. Journal of Applied Phycology, 27 5: 1853-1860. doi:10.1007/s10811-014-0491-3

Occasional tillage has no effect on soil microbial biomass, activity and composition in Vertisols under long-term no-till

Rincon-Florez, Vivian A., Dang, Yash P., Crawford, Mark H., Schenk, Peer M. and Carvalhais, Lilia C. (2015) Occasional tillage has no effect on soil microbial biomass, activity and composition in Vertisols under long-term no-till. Biology and Fertility of Soils, 52 2: 191-202. doi:10.1007/s00374-015-1066-4

UV-C mediated rapidcarotenoid induction and settling performance of Dunaliellasalina and Haematococcus pluvialis

Sharma, Kalpesh K., Ahmed, Faruq, Schenk, Peer M. and Li, Yan (2015) UV-C mediated rapidcarotenoid induction and settling performance of Dunaliellasalina and Haematococcus pluvialis. Biotechnology and Bioengineering, 112 10: 2106-2114. doi:10.1002/bit.25621

Enhanced triacylglyceride extraction from microalgae using free nitrous acid pre-treatment

Bai, Xue, Schenk, Peer M., Yuan, Zhiguo, Lant, Paul A. and Pratt, Steven (2015) Enhanced triacylglyceride extraction from microalgae using free nitrous acid pre-treatment. Applied Energy, 154 183-189. doi:10.1016/j.apenergy.2015.04.045

Linking jasmonic acid signaling, root exudates, and rhizosphere microbiomes

Carvalhais, Lilia C., Dennis, Paul G., Badri, Dayakar V., Kidd, Brendan N., Vivanco, Jorge M. and Schenk, Peer M. (2015) Linking jasmonic acid signaling, root exudates, and rhizosphere microbiomes. Molecular Plant-Microbe Interactions, 28 9: 1049-1058. doi:10.1094/MPMI-01-15-0016-R

Effect of drying, storage temperature and air exposure on astaxanthin stability from Haematococcus pluvialis

Ahmed, Faruq, Li, Yan, Fanning, Kent, Netzel, Michael and Schenk, Peer M. (2015) Effect of drying, storage temperature and air exposure on astaxanthin stability from Haematococcus pluvialis. Food Research International, 74 231-236. doi:10.1016/j.foodres.2015.05.021

Pavlova lutheri is a high-level producer of phytosterols

Ahmed, Faruq, Zhou, Wenxu and Schenk, Peer M. (2015) Pavlova lutheri is a high-level producer of phytosterols. Algal Research, 10 210-217. doi:10.1016/j.algal.2015.05.013

Rapid lipid induction in Chlorella sp. by UV-C radiation

Sharma, Kalpesh K., Li, Yan and Schenk, Peer M. (2015) Rapid lipid induction in Chlorella sp. by UV-C radiation. Bioenergy Research, 8 4: 1824-1830. doi:10.1007/s12155-015-9633-y

Rapid induction of omega-3 fatty acids (EPA) in Nannochloropsis sp. by UV-C radiation

Sharma, Kalpesh and Schenk, Peer M. (2015) Rapid induction of omega-3 fatty acids (EPA) in Nannochloropsis sp. by UV-C radiation. Biotechnology and Bioengineering, 112 6: 1243-1249. doi:10.1002/bit.25544

Growth and lipid accumulation of microalgae from fluctuating brackish and sea water locations in South East Queensland—Australia

Duong, Van Thang, Thomas-Hall, Skye R. and Schenk, Peer M. (2015) Growth and lipid accumulation of microalgae from fluctuating brackish and sea water locations in South East Queensland—Australia. Frontiers in Plant Science, 6 MAY: 1-8. doi:10.3389/fpls.2015.00359

Changes in the soil quality attributes of continuous no-till farming systems following a strategic tillage

Crawford, M. H., Rincon-Florez, V., Balzer, A., Dang, Y. P., Carvalhais, L. C., Liu, H. and Schenk, P. M. (2015) Changes in the soil quality attributes of continuous no-till farming systems following a strategic tillage. Soil Research, 53 3: 263-273. doi:10.1071/SR14216

High protein- and high lipid-producing microalgae from northern Australia as potential feedstock for animal feed and biodiesel

Duong, Van Thang, Ahmed, Faruq, Thomas-Hall, Skye R., Quigley, Simon, Nowak, Ekaterina and Schenk, Peer M. (2015) High protein- and high lipid-producing microalgae from northern Australia as potential feedstock for animal feed and biodiesel. Frontiers in Bioengineering and Biotechnology, 3 MAY: 1-7. doi:10.3389/fbioe.2015.00053

Induced carotenoid accumulation in Dunaliella salina and Tetraselmis suecica by plant hormones and UV-C radiation

Ahmed, Faruq, Fanning, Kent, Netzel, Michael and Schenk, Peer M. (2015) Induced carotenoid accumulation in Dunaliella salina and Tetraselmis suecica by plant hormones and UV-C radiation. Applied Microbiology and Biotechnology, 99 22: 9407-9416. doi:10.1007/s00253-015-6792-x

Molecular defense responses in roots and the rhizosphere against Fusarium oxysporum

Chen, Yi Chung, Kidd, Brendan N., Carvalhais, Lilia C. and Schenk, Peer M. (2014) Molecular defense responses in roots and the rhizosphere against Fusarium oxysporum. Plant Signaling and Behavior, 9 12: e977710-1-e977710-3. doi:10.4161/15592324.2014.977710

Profiling of carotenoids and antioxidant capacity of microalgae from subtropical coastal and brackish waters

Ahmed, Faruq, Fanning, Kent, Netzel, Michael, Turner, Warwick, Li, Yan and Schenk, Peer M. (2014) Profiling of carotenoids and antioxidant capacity of microalgae from subtropical coastal and brackish waters. Food Chemistry, 165 300-306. doi:10.1016/j.foodchem.2014.05.107

Comparative effects of biomass pre-treatments for direct and indirect transesterification to enhance microalgal lipid recovery

Naghdi, Forough Ghasemi , Thomas-Hall, Skye R., Durairatnam, Reuben, Pratt, Steven and Schenk, Peer M.P. (2014) Comparative effects of biomass pre-treatments for direct and indirect transesterification to enhance microalgal lipid recovery. Frontiers in Energy Research, 2 DEC: 57. doi:10.3389/fenrg.2014.00057

New host record of a 'Candidatus Phytoplasma asteris'-related strain infecting peach in India

Singh, Jitender, Rani, Anchal, Kumar, Pankaj, Baranwal, V. K., Saroj, P. L., Sirohi, Anil, Pandey, Amar N. and Schenk, Peer M. (2014) New host record of a 'Candidatus Phytoplasma asteris'-related strain infecting peach in India. Australasian Plant Disease Notes, 9 1: 125.1-125.4. doi:10.1007/s13314-014-0125-2

Plant defence inducers rapidly influence the diversity of bacterial communities in a potting mix

Carvalhais, Lilia C., Dennis, Paul G. and Schenk, Peer M. (2014) Plant defence inducers rapidly influence the diversity of bacterial communities in a potting mix. Applied Soil Ecology, 84 1-5. doi:10.1016/j.apsoil.2014.06.011

Isolation of high-lipid Tetraselmis suecica strains following repeated UV-C mutagenesis, FACS, and high-throughput growth selection

Lim, David K. Y., Schuhmann, Holger, Sharma, Kalpesh and Schenk, Peer M. (2014) Isolation of high-lipid Tetraselmis suecica strains following repeated UV-C mutagenesis, FACS, and high-throughput growth selection. Bioenergy Research, 8 2: 750-759. doi:10.1007/s12155-014-9553-2

Root defense analysis against fusarium oxysporum reveals new regulators to confer resistance

Chen, Yi Chung, Wong, Chin Lin, Muzzi, Frederico, Vlaardingerbroek, Ido, Kidd, Brendan N. and Schenk, Peter M. (2014) Root defense analysis against fusarium oxysporum reveals new regulators to confer resistance. Scientific Reports, 4 . doi:10.1038/srep05584

UV-C-mediated lipid induction and settling, a step change towards economical microalgal biodiesel production

Sharma, Kalpesh, Li, Yan and Schenk, Peer M. (2014) UV-C-mediated lipid induction and settling, a step change towards economical microalgal biodiesel production. Green Chemistry, 16 7: 3539-3548. doi:10.1039/c4gc00552j

Reduced peroxisomal citrate synthase activity increases substrate availability for polyhydroxyalkanoate biosynthesis in plant peroxisomes

Tilbrook, Kimberley, Poirier, Yves, Gebbie, Leigh, Schenk, Peer M., McQualter, Richard B. and Brumbley, Stevens M. (2014) Reduced peroxisomal citrate synthase activity increases substrate availability for polyhydroxyalkanoate biosynthesis in plant peroxisomes. Plant Biotechnology Journal, 12 8: 1044-1052. doi:10.1111/pbi.12211

Effects of long chain fatty acid synthesis and associated gene expression in microalga Tetraselmis sp.

Adarme-Vega, T. Catalina, Thomas-Hall, Skye R., Lim, David K. Y. and Schenk, Peer M. (2014) Effects of long chain fatty acid synthesis and associated gene expression in microalga Tetraselmis sp.. Marine Drugs, 12 6: 3381-3398. doi:10.3390/md12063381

Effective harvesting of low surface-hydrophobicity microalgae by froth flotation

Garg, Sourabh, Wang, Liguang and Schenk, Peer M. (2014) Effective harvesting of low surface-hydrophobicity microalgae by froth flotation. Bioresource Technology, 159 437-441. doi:10.1016/j.biortech.2014.03.030

A comparative study: The impact of different lipid extraction methods on current microalgal lipid research

Li, Yan, Ghasemi Naghdi, Forough, Garg, Sourabh, Adarme-Vega, Tania Catalina, Thurecht, Kristofer J., Ghafor, Wael Abdul, Tannock, Simon and Schenk, Peer M. (2014) A comparative study: The impact of different lipid extraction methods on current microalgal lipid research. Microbial Cell Factories, 13 1: 14. doi:10.1186/1475-2859-13-14

Towards sustainable sources for omega-3 fatty acids production

Adarme-Vega, T. Catalina, Thomas-Hall, Skye R. and Schenk, Peer M. (2014) Towards sustainable sources for omega-3 fatty acids production. Current Opinion in Biotechnology, 26 14-18. doi:10.1016/j.copbio.2013.08.003

Ethylene response factor 6 is a regulator of reactive oxygen species signaling in Arabidopsis

Sewelam, Nasser, Kazan, Kemal, Thomas-Hall, Skye R., Kidd, Brendan N., Manners, John M. and Schenk, Peer M. (2013) Ethylene response factor 6 is a regulator of reactive oxygen species signaling in Arabidopsis. PLoS One, 8 8: e70289.1-e70289.13. doi:10.1371/journal.pone.0070289

Plant growth in Arabidopsis is assisted by compost soil-derived microbial communities

Carvalhais, Lilia C., Muzzi, Frederico, Tan, Chin-Hong, Hsien-Choo, Jin and Schenk, Peer M. (2013) Plant growth in Arabidopsis is assisted by compost soil-derived microbial communities. Frontiers in Plant Science, 4 JUL: 235.1-235.15. doi:10.3389/fpls.2013.00235

Activation of the jasmonic acid plant defence pathway alters the composition of rhizosphere bacterial communities

Carvalhais, Lilia C., Dennis, Paul G., Badri, Dayakar V., Tyson, Gene W., Vivanco, Jorge M. and Schenk, Peer M. (2013) Activation of the jasmonic acid plant defence pathway alters the composition of rhizosphere bacterial communities. PLoS ONE, 8 2: e56457. doi:10.1371/journal.pone.0056457

Critical analysis of current microalgae dewatering techniques

Sharma, Kalpesh K., Garg, Sourabh, Li,Yan, Malekizadeh, Ali and Schenk, Peer M. (2013) Critical analysis of current microalgae dewatering techniques. Biofuels, 4 4: 397-407. doi:10.4155/bfs.13.25

Culture-independent molecular tools for soil and rhizosphere microbiology

Rincon-Florez, Vivian A., Carvalhais, Lilia C. and Schenk, Peer M. (2013) Culture-independent molecular tools for soil and rhizosphere microbiology. Diversity, 5 3: 581-612. doi:10.3390/d5030581

Sample processing and cDNA preparation for microbial metatranscriptomics in complex soil communities

Carvalhais, Lilia C. and Schenk, Peer M. (2013) Sample processing and cDNA preparation for microbial metatranscriptomics in complex soil communities. Methods in Enzymology, 531 251-267. doi:10.1016/B978-0-12-407863-5.00013-7

Thinking outside of the box: potential of zooplankton for microalgae harvesting

Li, Yan, Mangott, Arnold, Grierson, Scott and Schenk, Peer M. (2013) Thinking outside of the box: potential of zooplankton for microalgae harvesting. Biofuels, 4 3: 263-266. doi:10.4155/BFS.13.12

Application of metatranscriptomics to soil environments

Carvalhais, Lilia C., Dennis, Paul G., Tyson, Gene W. and Schenk, Peer M. (2012) Application of metatranscriptomics to soil environments. Journal of Microbiological Methods, 91 2: 246-251. doi:10.1016/j.mimet.2012.08.011

Flotation of marine microalgae: Effect of algal hydrophobicity

Garg, Sourabh, Li, Yan, Wang, Liguang and Schenk, Peer M. (2012) Flotation of marine microalgae: Effect of algal hydrophobicity. Bioresource Technology, 121 471-474. doi:10.1016/j.biortech.2012.06.111

MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis 1[C][W]

Cevik, Volkan, Kidd, Brendan N., Zhang, Peijun, Hill, Claire, Kiddle, Steve, Denby, Katherine J., Holub, Eric B., Cahill, David M., Manners, John M., Schenk, Peer M., Beynon, Jim and Kazan, Kemal (2012) MEDIATOR25 acts as an integrative hub for the regulation of jasmonate-responsive gene expression in Arabidopsis 1[C][W]. Plant Physiology, 160 1: 541-555. doi:10.1104/pp.112.202697

Current research and perspectives of microalgal biofuels in Australia

Li, Yan, Moheimani, Navid Reza and Schenk, Peer M. (2012) Current research and perspectives of microalgal biofuels in Australia. Biofuels, 3 4: 427-439. doi:10.4155/bfs.12.32

Isolation and evaluation of oil-producing microalgae from subtropical coastal and brackish waters

Lim, David K. Y., Garg, Sourabh, Timmins, Matthew, Zhang, Eugene S. B., Thomas-Hall, Skye R., Schuhmann, Holger, Li, Yan and Schenk, Peer M. (2012) Isolation and evaluation of oil-producing microalgae from subtropical coastal and brackish waters. Plos One, 7 7: e40751-1-e40751-13. doi:10.1371/journal.pone.0040751

Microalgal biofactories: a promising approach towards sustainable omega-3 fatty acid production

Adarme-Vega, T. Catalina, Lim, David K. Y., Timmins, Matthew, Vernen, Felicitas, Li, Yan and Schenk, Peer M. (2012) Microalgal biofactories: a promising approach towards sustainable omega-3 fatty acid production. Microbial Cell Factories, 11 96.1-96.10. doi:10.1186/1475-2859-11-96

Microalgae isolation and selection for prospective biodiesel production

Duong, Van Thang, Li, Yan, Nowak, Ekaterina and Schenk, Peer M. (2012) Microalgae isolation and selection for prospective biodiesel production. Energies, 5 6: 1835-1849. doi:10.3390/en5061835

High lipid induction in microalgae for biodiesel production

Sharma, Kalpesh K., Schuhmann, Holger and Schenk, Peer M. (2012) High lipid induction in microalgae for biodiesel production. Energies, 5 5: 1532-1553. doi:10.3390/en5051532

Unravelling plant-microbe interactions: Can multi-species transcriptomics help?

Schenk, Peer M., Carvalhais, Lilia C. and Kazan, Kemal (2012) Unravelling plant-microbe interactions: Can multi-species transcriptomics help?. Trends in Biotechnology, 30 3: 177-184. doi:10.1016/j.tibtech.2011.11.002

Perspectives on metabolic engineering for increased lipid contents in microalgae

Schuhmann, Holger, Lim, David K. Y. and Schenk, Peer M. (2012) Perspectives on metabolic engineering for increased lipid contents in microalgae. Biofuels, 3 1: 71-86. doi:10.4155/bfs.11.147

Peroxisomal polyhydroxyalkanoate biosynthesis is a promising strategy for bioplastic production in high biomass crops

Tilbrook, Kimberley, Gebbie, Leigh, Schenk, Peer M., Poirier, Yves and Brumbley, Stevens M. (2011) Peroxisomal polyhydroxyalkanoate biosynthesis is a promising strategy for bioplastic production in high biomass crops. Plant Biotechnology Journal, 9 9: 958-969. doi:10.1111/j.1467-7652.2011.00600.x

Is the effect of priming plants, and a functional JAR1, negligible on the foraging behaviour and development of a generalist lepidopteran, Helicoverpa armigera?

Johnson, M.L., Schenk, P.M., Cribb, B.W., Moore, C., Perkins, L.E. and Zalucki, M.P. (2011) Is the effect of priming plants, and a functional JAR1, negligible on the foraging behaviour and development of a generalist lepidopteran, Helicoverpa armigera?. Entomologia Experimentalis Et Applicata, 141 1: 78-87. doi:10.1111/j.1570-7458.2011.01170.x

Diverse roles of the Mediator complex in plants

Kidd, Brendan N., Cahill, David M., Manners, John M., Schenk, Peer M. and Kazan, Kemal (2011) Diverse roles of the Mediator complex in plants. Seminars in Cell and Developmental Biology, 22 7: 741-748. doi:10.1016/j.semcdb.2011.07.012

Auxin signaling and transport promote susceptibility to the root infecting fungal pathogen Fusarium oxysporum in Arabidopsis

Kidd, Brendan N., Kadoo, Narendra Y., Dombrecht, Bruno, Tekeoglu, Mücella, Gardiner, Donald M., Thatcher, Louise F., Aitken, Elizabeth A. B., Schenk, Peer M., Manners, John M. and Kazan, Kemal (2011) Auxin signaling and transport promote susceptibility to the root infecting fungal pathogen Fusarium oxysporum in Arabidopsis. Molecular Plant Microbe Interactions, 24 6: 733-748. doi:10.1094/MPMI-08-10-0194

Transcription profiling of the isoflavone phenylpropanoid pathway in soybean in response to Bradyrhizobium japonicum inoculation

Pregelj, Lisette, McLanders, Joanne R., Gresshoff, Peter M. and Schenk, Peer M. (2011) Transcription profiling of the isoflavone phenylpropanoid pathway in soybean in response to Bradyrhizobium japonicum inoculation. Functional Plant Biology, 38 1: 13-24. doi:10.1071/FP10093

Massively parallel sequencing and analysis of expressed sequence tags in a successful invasive plant

Prentis, Peter J., Woolfit, Megan, Thomas-Hall, Skye R., Ortiz-Barrientos, Daniel, Pavasovic, Ana, Lowe, Andrew J. and Schenk, Peer M. (2010) Massively parallel sequencing and analysis of expressed sequence tags in a successful invasive plant. Annals of Botany, 106 6: 1009-1017. doi:10.1093/aob/mcq201

Development of an environmental functional gene microarray for soil microbial communities

McGrath, Ken C., Mondav, Rhiannon, Sintrajaya, Regina, Slattery, Bill, Schmidt, Susanne and Schenk, Peer M. (2010) Development of an environmental functional gene microarray for soil microbial communities. Applied and Environmental Microbiology, 76 21: 7161-7170. doi:10.1128/AEM.03108-09

The race for highly productive microalgae strains

Lim, David K.Y., Sharma, Kalpesh, Garg, Sourabh and Schenk, Peer M. (2010) The race for highly productive microalgae strains. Biofuels, 1 6: 835-837. doi:10.4155/BFS.10.65

A MYB gene from wheat (Triticum aestivum L.) is up-regulated during salt and drought stresses and differentially regulated between salt-tolerant and sensitive genotypes

Rahaie, Mahdi, Xue, Gang-Ping, Naghavi, Mohammad R., Alizadeh, Houshang and Schenk, Peer M. (2010) A MYB gene from wheat (Triticum aestivum L.) is up-regulated during salt and drought stresses and differentially regulated between salt-tolerant and sensitive genotypes. Plant Cell Reports, 29 8: 835-844. doi:10.1007/s00299-010-0868-y

DNA is taken up by root hairs and pollen, and stimulates root and pollen tube growth

Paungfoo-Lonhienne, Chanyarat, Lonhienne, Thierry G. A., Mudge, Stephen R., Schenk, Peer M., Christie, Michael, Carroll, Bernard J. and Schmidt, Susanne (2010) DNA is taken up by root hairs and pollen, and stimulates root and pollen tube growth. Plant Physiology, 153 2: 799-805. doi:10.1104/pp.110.154963

Plant mediator: Mediating the jasmonate response

Kidd, Brendan N., Aitken, Elizabeth A., Schenk, Peer M., Manners, John M. and Kazan, Kemal (2010) Plant mediator: Mediating the jasmonate response. Plant Signaling and Behavior, 5 6: 718-720.

Efficient targeting of polyhydroxybutyrate biosynthetic enzymes to plant peroxisomes requires more than three amino acids in the carboxyl-terminal signal

Tilbrook, K, Gnanasambandam, A, Schenk, PM and Brumbley, SM (2010) Efficient targeting of polyhydroxybutyrate biosynthetic enzymes to plant peroxisomes requires more than three amino acids in the carboxyl-terminal signal. JOURNAL OF PLANT PHYSIOLOGY, 167 4: 329-332. doi:10.1016/j.jplph.2009.10.001

The metabolome of Chlamydomonas reinhardtii following induction of anaerobic H-2 production by sulfur depletion (vol 284, pg 23415, 2009)

Timmins, Matthew, Zhou, Wenxu, Rupprecht, Jens, Lim, Lysha, Thomas-Hall, Skye R., Doebbe, Anja, Kruse, Olaf, Hankamer, Ben, Marx, Ute C., Smith, Steven M. and Schenk, Peer M. (2009) The metabolome of Chlamydomonas reinhardtii following induction of anaerobic H-2 production by sulfur depletion (vol 284, pg 23415, 2009). Journal of Biological Chemistry, 284 51: 35996-35996. doi:10.1074/jbc.A109.003541

The Mediator Complex Subunit PFT1 Is a Key Regulator of Jasmonate-Dependent Defense in Arabidopsis

Kidd, Brendan N., Edgar, Cameron I., Kumar, Krish K., Aitken, Elizabeth A., Schenk, Peer M., Manners, John M. and Kazan, Kemal (2009) The Mediator Complex Subunit PFT1 Is a Key Regulator of Jasmonate-Dependent Defense in Arabidopsis. Plant Cell, 21 8: 2237-2252. doi:10.1105/tpc.109.066910

The metabolome of chlamydomonas reinhardtii following induction of anaerobic H-2 production by sulfur depletion

Timmins, M, Zhou, W. X., Rupprecht, J, Lim, L, Thomas-Hall, S. R., Doebbe, A, Kruse, O, Hankamer, B, Marx, U. C., Smith, S. M. and Schenk, P. M. (2009) The metabolome of chlamydomonas reinhardtii following induction of anaerobic H-2 production by sulfur depletion. Journal of Biological Chemistry, 284 35: 23415-23425. doi:10.1074/jbc.M109.003541

Microarray analyses to study plant defence and rhizosphere-microbe interactions

Schenk, Peer M.P., Choo, J.H. and Wong, C.L. (2009) Microarray analyses to study plant defence and rhizosphere-microbe interactions. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources, 4 045: 1-14. doi:10.1079/PAVSNNR20094045

Nitrogen affects cluster root formation and expression of putative peptide transporters

Paungfoo-Lonhienne, Chanyarat, Schenk, Peer M., Lonhienne, Thierry G. A., Brackin, Richard, Meier, Stefan, Rentsch, Doris and Schmidt, Susanne (2009) Nitrogen affects cluster root formation and expression of putative peptide transporters. Journal of Experimental Botany, 60 9: 2665-2676. doi:10.1093/jxb/erp111

Reproductive biology of Corymbia citriodora subsp variegata and effective pollination across its native range in Queensland, Australia

Bacles, CFE, Brooks, J, Lee, DJ, Schenk, PM, Lowe, AJ and Kremer, A (2009) Reproductive biology of Corymbia citriodora subsp variegata and effective pollination across its native range in Queensland, Australia. SOUTHERN FORESTS, 71 2: 125-132. doi:10.2989/SF.2009.71.2.7.822

Heterotrimeric G proteins-mediated resistance to necrotrophic pathogens includes mechanisms independent of salicylic acid-, jasmonic acid/ethylene- and abscisic acid-mediated defense signaling

Trusov, Yuri, Sewelam, Nasser, Rookes, James Edward, Kunkel, Matt, Nowak, Ekaterina, Schenk, Peer Martin and Botella, Jose R (2009) Heterotrimeric G proteins-mediated resistance to necrotrophic pathogens includes mechanisms independent of salicylic acid-, jasmonic acid/ethylene- and abscisic acid-mediated defense signaling. The Plant Journal, 58 1: 69-81. doi:10.1111/j.1365-313X.2008.03755.x

Phylogenetic and molecular analysis of hydrogen-producing green algae

Timmins, Matthew, Thomas-Hall, Skye R., Darling, Aaron, Zhang, Eugene, Hankamer, Ben, Marx, Ute C and Schenk, Peer M. (2009) Phylogenetic and molecular analysis of hydrogen-producing green algae. Journal of Experimental Botany, 60 6: 1691-1702. doi:10.1093/jxb/erp052

Phylogenetic and transcriptional analysis of a strictosidine synthase-like gene family in Arabidopsis thaliana reveals involvement in plant defence responses

Sohani, M. M., Schenk, P. M. P., Schultz, C. J. and Schmidt, O. (2009) Phylogenetic and transcriptional analysis of a strictosidine synthase-like gene family in Arabidopsis thaliana reveals involvement in plant defence responses. Plant Biology, 11 1: 105-117. doi:10.1111/j.1438-8677.2008.00139.x

Transcriptome for photobiological hydrogen production induced by sulfur deprivation in the green alga Chlamydomonas reinhardtii

Nguyen, A.V., Thomas-Hall, S. R., Malnoe, A., Timmins, M., Mussgnug, J.H., Rupprecht, J., Kruse, O., Hankamer, B. and Schenk, P.M.P. (2008) Transcriptome for photobiological hydrogen production induced by sulfur deprivation in the green alga Chlamydomonas reinhardtii. Eukaryotic Cell, 7 11: 1965-1979. doi:10.1128/EC.00418-07

Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Desmond, Olivia J., Manners, John M., Schenk, Peer M., Maclean, Donald J. and Kazan, Kemal (2008) Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum. Physiological and Molecular Plant Pathology, 73 1-3: 40-47. doi:10.1016/j.pmpp.2008.12.001

Isolation and analysis of mRNA from environmental microbial communities

McGrath, K., Thomas-Hall, S. R., Cheng, C.T., Leo, L., Alexa, A., Schmidt, Susanne and Schenk, Peer M.P. (2008) Isolation and analysis of mRNA from environmental microbial communities. Journal of Microbiological Methods, 75 2: 172-176. doi:10.1016/j.mimet.2008.05.019

UV-Induced DNA Damage Promotes Resistance to the Biotrophic Pathogen Hyaloperonospora parasitica in Arabidopsis

Kunz, B.A., Dando, P.K., Grice, D.M., Mohr, P.G., Schenk, P.M.P. and Cahill, D.M. (2008) UV-Induced DNA Damage Promotes Resistance to the Biotrophic Pathogen Hyaloperonospora parasitica in Arabidopsis. Plant Physiology, 148 2: 1021-1031. doi:10.1104/pp.108.125435

Identification of plant defence genes in canola using Arabidopsis cDNA microarrays

Schenk, P. M., Thomas-Hall, S. R., Nguyen, A. V., Manners, J. M., Kazan, K. and Spangenberg, G. (2008) Identification of plant defence genes in canola using Arabidopsis cDNA microarrays. Plant Biology, 10 5: 539-547. doi:10.1111/j.1438-8677.2008.00056.x

The Fusarium mycotoxin deoxynivalenol elicits hydrogen peroxide production, programmed cell death and defence responses in wheat

Desmond, Olivia J., Manners, John M., Stephens, Amber E., Maclean, Donald J., Schenk, Peer M., Gardiner, Donald M., Munn, Alan L. and Kazan, Kemal (2008) The Fusarium mycotoxin deoxynivalenol elicits hydrogen peroxide production, programmed cell death and defence responses in wheat. Molecular Plant Pathology, 9 4: 435-445. doi:10.1111/J.1364-3703.2008.00475.X

Plants can use protein as a nitrogen source without assistance from other organisms

Paungfoo-Lonhienne, C., Lonhienne, T.G.A,, Rentsch, D., Robinson, N., Christie, M., Webb, R.I., Gamage, H. K., Carroll, B. J., Schenk, P. M.P. and Schmidt, Susanne (2008) Plants can use protein as a nitrogen source without assistance from other organisms. Proceedings of the National Academy of Sciences of the United States of America, 105 11: 4524-4529. doi:10.1073/pnas.0712078105

Second Generation Biofuels: High-Efficiency Microalgae for Biodiesel Production

Schenk, Peer M., Thomas-Hall, Skye R., Stephens, Evan, Marx, Ute C., Mussgnug, Jan H., Posten, Clemens, Kruse, Olaf and Hankamer, Ben (2008) Second Generation Biofuels: High-Efficiency Microalgae for Biodiesel Production. BioEnergy Research, 1 1: 20-43. doi:10.1007/s12155-008-9008-8

MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis

Dombrecht, Bruno, Xue, Gang Ping, Sprague, Susan J., Kirkegaard, John A, Ross, John J., Reid, James B., Fitt, Gary P., Sewelam, Nasser, Schenk, Peer M., Manners, John M. and Kazan, Kemal (2007) MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis. Plant Cell, 19 7: 2225-2245. doi:10.1105/tpc.106.048017

Promoters of orthologous Glycine max and Lotus japonicus nodulation autoregulation genes interchangeably drive phloem-specific expression in transgenic plants

Nontachaiyapoom, Sureeporn, Scott, Paul T., Men, Artem E., Kinkema, Mark, Schenk, Peer M. and Gresshoff, Peter M. (2007) Promoters of orthologous Glycine max and Lotus japonicus nodulation autoregulation genes interchangeably drive phloem-specific expression in transgenic plants. Molecular Plant-Microbe Interactions, 20 7: 769-780. doi:10.1094/MPMI-20-7-0769

Banana streak virus: A highly diverse plant pararetrovirus

Remans, T., Iram, S., Shuey, L., Jaufeerally-Fakim, Y. and Schenk, P. M. (2007) Banana streak virus: A highly diverse plant pararetrovirus. Plant Viruses, 1 1: 33-38.

Engineering photosynthetic light capture: Impacts on improved solar energy to biomass conversion

Mussgnug, Jan H., Thomas-Hall, Skye, Rupprecht, Jens, Foo, Alexander, Klassen, Viktor, McDowall, Alasdair, Schenk, Peer M., Kruse, Olaf and Hankamer, Ben (2007) Engineering photosynthetic light capture: Impacts on improved solar energy to biomass conversion. Plant Biotechnology Journal, 5 6: 802-814. doi:10.1111/j.1467-7652.2007.00285.x

Phylogenetic and molecular analysis of the ribulose-1,5-bisphosphate carboxylase small subunit gene family in banana

Thomas-Hall, Skye, Campbell, Paul R., Carlens, Katrien, Kawanishi, Emi, Swennen, Rony, Sagi, László and Schenk, Peer M. (2007) Phylogenetic and molecular analysis of the ribulose-1,5-bisphosphate carboxylase small subunit gene family in banana. Journal of Experimental Botany, 58 10: 2685-2697. doi:10.1093/jxb/erm129

pGFPGUSPlus, a new binary vector for gene expression studies and optimising transformation systems in plants

Vickers, C. E., Schenk, P. M., Li, D., Mullineaux, P. M. and Gresshoff, P. M. (2007) pGFPGUSPlus, a new binary vector for gene expression studies and optimising transformation systems in plants. Biotechnology Letters, 29 11: 1793-1796. doi:10.1007/s10529-007-9467-6

Heterotrimeric G proteins facilitate Arabidopsis resistance to necrotrophic pathogens and are involved in jasmonate signaling

Trusov, Y., Rookes, J. E., Chakravorty, D., Armour, D., Schenk, P. M. and Botella, J. R. (2006) Heterotrimeric G proteins facilitate Arabidopsis resistance to necrotrophic pathogens and are involved in jasmonate signaling. Plant Physiology, 140 1: 210-220. doi:10.1104/pp.105.069625

Methyl jasmonate induced gene expression in wheat delays symptom development by the crown rot pathogen Fusarium pseudograminearum

Desmond, O. J., Edgar, C. I., Manners, J. M., Maclean, D. J., Schenk, P. M. and Kazan, K. (2006) Methyl jasmonate induced gene expression in wheat delays symptom development by the crown rot pathogen Fusarium pseudograminearum. Physiological and Molecular Plant Pathology, 67 3-5: 171-179. doi:10.1016/j.pmpp.2005.12.007

Salicylic acid mediates resistance to the vascular wilt pathogen Fusarium oxysporum in the model host Arabidopsis thaliana

Edgar, C. I., McGrath, K. C., Dombrecht, B., Manners, J. M., Maclean, D J, Schenk, P. M. P. and Kazan, K. (2006) Salicylic acid mediates resistance to the vascular wilt pathogen Fusarium oxysporum in the model host Arabidopsis thaliana. Australasian Plant Pathology, 35 6: 581-591. doi:10.1071/AP06060

Functional promoter analysis using an approach based on an in vitro evolution strategy

Remans, Tony, Grof, Christopher P. L., Ebert, Paul R. and Schenk, Peer M. (2005) Functional promoter analysis using an approach based on an in vitro evolution strategy. Biotechniques, 38 2: 209-216. doi:10.2144/05382ST01

Identification of functional sequences in the pregenomic RNA promoter of the Banana streak virus Cavendish strain (BSV-Cav)

Remans, T., Grof, C. P. L., Ebert, P. R. and Schenk, P. M. (2005) Identification of functional sequences in the pregenomic RNA promoter of the Banana streak virus Cavendish strain (BSV-Cav). Virus Research, 108 1-2: 177-186. doi:10.1016/j.virusres.2004.09.005

Improved photobiological H-2 production in engineered green algal cells

Kruse, O., Rupprecht, J., Bader, K. P., Thomas-Hall, S., Schenk, P. M., Finazzi, G. and Hankamer, B. (2005) Improved photobiological H-2 production in engineered green algal cells. Journal of Biological Chemistry, 280 40: 34170-34177. doi:10.1074/jbc.M503840200

Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression

McGrath, Ken C., Dombrecht, Bruno, Manners, John M., Schenk, Peer M., Edgar, Cameron I., Maclean, Donald J., Scheible, Wolf-Rüdiger, Udvardi, Michael K. and Kazan, Kemal (2005) Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression. Plant Physiology, 139 2: 949-959. doi:10.1104/pp.105.068544

The SEN1 gene of Arabidopsis is regulated by signals that link plant defence responses and senescence

Schenk, P. M., Kazan, K., Rusu, A. G., Manners, J. M. and Maclean, D. J. (2005) The SEN1 gene of Arabidopsis is regulated by signals that link plant defence responses and senescence. Plant Physiology And Biochemistry, 43 10-11: 997-1005. doi:10.1016/j.plaphy.2005.09.002

Antagonistic interaction between abscisic acid and jasmonate-ethylene signaling pathways modulates defense gene expression and disease resistance in Arabidopsis

Anderson, Jonathan P., Badruzsaufari, Ellet, Schenk, Peer M., Manners, John M., Desmond, Olivia J., Ehlert, Christina, Maclean, Donald J., Ebert, Paul R. and Kazan, Kemal (2004) Antagonistic interaction between abscisic acid and jasmonate-ethylene signaling pathways modulates defense gene expression and disease resistance in Arabidopsis. Plant Cell, 16 12: 3460-3479. doi:10.1105/tpc.104.025833

Rapid cloning of novel genes and promoters for functional analysis in transgenic cells

Schenk, P. M. P., Vickers, C. E. and Manners, J.M. (2004) Rapid cloning of novel genes and promoters for functional analysis in transgenic cells. Transgenics, 4 151-156.

The Arabidopsis mutant iop1 exhibits induced over-expression of the plant defensin gene PDF1.2 and enhanced pathogen resistance

Penninckx, Iris A. M. A., Eggermont, Kristel, Schenk, Peer M., Van Den Ackerveken, Guido, Cammue, Bruno P. A. and Thomma, Bart P. H. J. (2003) The Arabidopsis mutant iop1 exhibits induced over-expression of the plant defensin gene PDF1.2 and enhanced pathogen resistance. Molecular Plant Pathology, 4 6: 479-486. doi:10.1046/J.1364-3703.2003.00193.X

Pathogen-responsive expression of a putative ATP-binding cassette transporter gene conferring resistance to the diterpenoid sclareol is regulated by multiple defense signaling pathways in arabidopsis

Campbell, Emma J., Schenk, Peer M. P., Kazan, Kemal, Penninckx, Iris A. M. A., Anderson, Jonathan P., Maclean, Don J., Cammue, Bruno P. A., Ebert, Paul R. and Manners, John M. (2003) Pathogen-responsive expression of a putative ATP-binding cassette transporter gene conferring resistance to the diterpenoid sclareol is regulated by multiple defense signaling pathways in arabidopsis. Plant Physiology, 133 3: 1272-1284. doi:10.1104/pp.103.024182

Systemic gene expression in arabidopsis during an incompatible interaction with Alternaria brassicicola

Schenk, P. M. P., Kazan, K., Manners, J., Anderson, J. P., Simpson, R. S., Wilson, I. J., Somerville, S. C. and Maclean, D. J. (2003) Systemic gene expression in arabidopsis during an incompatible interaction with Alternaria brassicicola. Plant Physiology, 132 2: 999-1010. doi:10.1104/pp.103.021683

Using biplots to interpret gene expression patterns in plants

Chapman, Scott, Schenk, Peer, Kazan, Kemal and Manners, John (2002) Using biplots to interpret gene expression patterns in plants. Bioinformatics, 18 1: 202-204. doi:10.1093/bioinformatics/18.1.202

DNA microarrays: new tools in the analysis of plant defence responses

Kazan, Kemal, Schenk, Peer M., Wilson, Iain and Manners, John M. (2001) DNA microarrays: new tools in the analysis of plant defence responses. Molecular Plant Pathology, 2 3: 177-185. doi:10.1046/j.1364-3703.2001.00061.x

Banana streak virus promoters are highly active in banana and other monocot and dicot plants

Remans, T., Sagi, L., Elliott, A.R., Dietzgen, R.G., Swennen, R. L., Ebert, P. R., Grof, C. P., Manners, J. M. and Schenk, P. M. P. (2001) Banana streak virus promoters are highly active in banana and other monocot and dicot plants. Infomusa, 10 10-11.

Promoters for pregenomic RNA of banana streak badnavirus are active for transgene expression in monocot and dicot plants

Schenk, P. M., Remans, T., Sagi, L., Elliott, A. R., Dietzgen, R. G., Swennen, R., Ebert, P. R., Grof, C. P. L. and Manners, J. M. (2001) Promoters for pregenomic RNA of banana streak badnavirus are active for transgene expression in monocot and dicot plants. Plant Molecular Biology, 47 3: 399-412. doi:10.1023/A:1011680008868

Coordinated plant defense responses in Arabidopsis revealed by microarray analysis

Schenk, P. M., Kazan, K., Wilson, I., Anderson, J. P., Richmond, T., Somerville, S. C. and Manners, J. M. (2000) Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Proceedings of The National Academy of Sciences of The United States of America, 97 21: 11655-11660. doi:10.1073/pnas.97.21.11655

A protocol for the fluorometric quantification of mGFP5-ER and sGFP(S65T) in transgenic plants

Remans, T., Schenk, P. M., Manners, J. M., Grof, C. P. L. and Elliott, A. R. (1999) A protocol for the fluorometric quantification of mGFP5-ER and sGFP(S65T) in transgenic plants. Plant Molecular Biology Reporter, 17 4: 385-395. doi:10.1023/A:1007654318401

A promoter from sugarcane bacilliform badnavirus drives transgene expression in banana and other monocot and dicot plants

Schenk, P. M., Sagi, L., Remans, T., Dietzgen, R. G., Bernard, M. J., Graham, M. W. and Manners, J. M. (1999) A promoter from sugarcane bacilliform badnavirus drives transgene expression in banana and other monocot and dicot plants. Plant Molecular Biology, 39 6: 1221-1230. doi:10.1023/A:1006125229477

Assessment of transient gene expression in plant tissues using the green fluorescent protein as a reference

Schenk, P. M., Elliott, A. R. and Manners, J. M. (1998) Assessment of transient gene expression in plant tissues using the green fluorescent protein as a reference. Plant Molecular Biology Reporter, 16 4: 313-322. doi:10.1023/A:1007548813786

Improved High-Level Expression System for Eukaryotic Genes in Escherichia-Coli Using T7 Rna-Polymerase and Rare (Arg)Trnas

Schenk, PM, Baumann, S, Mattes, R and Steinbiss, HH (1995) Improved High-Level Expression System for Eukaryotic Genes in Escherichia-Coli Using T7 Rna-Polymerase and Rare (Arg)Trnas. Biotechniques, 19 2: 196-&.

Movement of Barley Mild Mosaic and Barley Yellow Mosaic-Viruses in Leaves and Roots of Barley

Schenk, PM, Antoniw, JF, Batista, MD, Jacobi, V, Adams, MJ and Steinbiss, HH (1995) Movement of Barley Mild Mosaic and Barley Yellow Mosaic-Viruses in Leaves and Roots of Barley. Annals of Applied Biology, 126 2: 291-305. doi:10.1111/j.1744-7348.1995.tb05367.x

Cloning and sequence analysis of RNA-2 of a mechanically transmitted UK isolate of barley mild mosaic bymovirus (BaMMV)

Jacobi, V, Peerenboom, E, Schenk, PM, Antoniw, JF, Steinbiss, HH and Adams, MJ (1995) Cloning and sequence analysis of RNA-2 of a mechanically transmitted UK isolate of barley mild mosaic bymovirus (BaMMV). Virus Research, 37 2: 99-111. doi:10.1016/0168-1702(95)00024-K

Association of two barley yellow mosaic virus (RNA 2) encoded proteins with cytoplasmic inclusion bodies revealed by immunogold localisation

Schenk, PM, Steinbiss, HH, Muller, B and Schmitz, K (1993) Association of two barley yellow mosaic virus (RNA 2) encoded proteins with cytoplasmic inclusion bodies revealed by immunogold localisation. Protoplasma, 173 3-4: 113-122. doi:10.1007/BF01379000

Towards the sustainable production of food grade Nannochloropsis biomass, high-quality oil, and high-value proteins

Chua, Elvis, Eltanahy, Eladl, Lee, Jeremy, Thomas-Hall, Skye, Dal'Molin, Cristiana, Netzel, Michael, Netzel, Gabriele and Schenk, Peer (2019). Towards the sustainable production of food grade Nannochloropsis biomass, high-quality oil, and high-value proteins. In: Abstracts Collection. 10th Asia-Pacific Conference on Algal Biotechnology, Nanchang, China, (118-118). 27-30 September 2019.

INTtrait - Intragenic New Breeding Technology for the Introduction of Production and Consumer Traits

Moyle, Richard, Pretorius, Lara-Simone, Mojtahedi, Narges, Nowak, Ekaterina and Schenk, Peer (2018). INTtrait - Intragenic New Breeding Technology for the Introduction of Production and Consumer Traits. In: 14th Quadrennial Congress of the International-Association-of-Plant-Biotechnology (IAPB), Dublin, Ireland, (S93-S93). 19-24 August 2018. doi:10.1007/s11627-018-9923-0

Strategic tillage in conservation agricultural systems of north-eastern Australia: why, where, when and how?

Dang, Yash Pal, Balzer, Anna, Crawford, Mark, Rincon-Florez, Vivian, Liu, Hongwei, Melland, Alice Rowena, Antille, Diogenes, Kodur, Shreevatsa, Bell, Michael John, Whish, Jeremey Patrick Milroy, Lai, Yunru, Seymour, Nikki, Carvalhais, Lilia Costa and Schenk, Peer (2018). Strategic tillage in conservation agricultural systems of north-eastern Australia: why, where, when and how?. In: International Conference on Conservation Agriculture and Sustainable Land Use (CASLU), Budapest Hungary, (1000-1015). May 31-Jun 02, 2016. doi:10.1007/s11356-017-8937-1

A Biorefinery of Nannochloropsis for the Sustainable Production of Eicosapentaenoic Acid and High-Value Protein Supplements

Chua, E., Eltanahy, E., Dal'Molin, C., Netzel, M., Netzel, G., Thomas-Hall, S. and Schenk, P. (2017). A Biorefinery of Nannochloropsis for the Sustainable Production of Eicosapentaenoic Acid and High-Value Protein Supplements. In: Book of poster abstracts. TropAg2017, International Tropical Agriculture Conference, Brisbane, Qld, Australia, (109-109). 20-22 November 2017.

External stimuli to induce nutraceutical biosynthesis in marine microalgae

Alsenani, Faisal , Sharma, Kalpesh , Ahmend, Faruq , Ruijuan, Ma , Thomas-Hall, Skye R. , Islam, Md Nazmul , Eladl Eltanahy, Eladl G. , Netzel, Michael , Fanning, Kent and Schenk, Peer M. (2016). External stimuli to induce nutraceutical biosynthesis in marine microalgae. In: Book of Abstracts. 1st Australia New Zealand Marine Biotechnology Society Symposium, Adelaide, SA, Australia, (16-16). 14-15 April 2016.

Induction of carotenoid production in the microalgae Tetraselmis suecica and Dunaliella salina by plant hormones

Ahmed, F., Fanning, K., Netzel, M. and Schenk, P. (2014). Induction of carotenoid production in the microalgae Tetraselmis suecica and Dunaliella salina by plant hormones. In: Program & Abstracts. AIFST Food Science Summer School 2014, St. Lucia, QLD, Australia, (). 5-7 February 2014.

Strategic tillage did not affect soil microbial bioindicators in long-term no-till farming systems in vertosols from Queensland, Australia

Rincon-Florez, Vivian A., Carvalhais, Lilia C., Liu, Hongwei, Dang, Yash, Crawford, Mark, Balzer, Anna, Bell, Mike, Ram, Dalal and Schenk, Peer (2014). Strategic tillage did not affect soil microbial bioindicators in long-term no-till farming systems in vertosols from Queensland, Australia. In: Proceedings of the Soil Science Australia National Soil Science Conference. Soil Science 2014: National Soil Science Conference, Melbourne, VIC, Australia, (1-1). 23-27 November 2014.

Strategic tillage impacts on biological attributes of long term no-till soils in northern grain region of Australia

Liu, Hongwei, Rincon-Florez, Vivian, Dang, Yash, Crawford, Mark, Balzer, Anna, Bell, Mike, Ram, Dalal, Costa Carvalhais, Lilia and Schenk, Peer (2014). Strategic tillage impacts on biological attributes of long term no-till soils in northern grain region of Australia. In: Antonio Patti, Caixan Tang and Vanessa Wong, Proceedings of the Soil Science Australia National Soil Science Conference. Soil Science 2014: National Soil Science Conference, Melbourne, VIC, Australia, (1-1). 23-27 November, 2014.

Carotenoids and antioxidant capacity in microalgae from south-east Queensland, Australia

Ahmed, F., Fanning, K., Netzel, M., Turner, W., Li, Y. and Schenk, P. M. (2013). Carotenoids and antioxidant capacity in microalgae from south-east Queensland, Australia. In: NSA 2013 ASM: Proceedings of the Nutrition Society of Australia (2013). NSA NSNZ 2013 Joint Annual Scientific Meeting: 37th Annual Scientific Meeting of the Nutrition Society of Australia in conjunction with the Nutrition Society of New Zealand, Brisbane, QLD, Australia, (654-654). 4-6 December, 2013.

Effects of algal hydrophobicity and bubble size on flotation separation of microalgae from aqueous medium

Garg, Sourabh, Wang, Liguang and Schenk, Peer (2013). Effects of algal hydrophobicity and bubble size on flotation separation of microalgae from aqueous medium. In: Chemeca 2013: Challenging Tomorrow. Chemeca 2013: Australasian Conference on Chemical Engineering, Brisbane, QLD, Australia, (1-5). 29 September-2 October, 2013.

Peroxisomal polyhydroxyalkanoate biosynthesis is a promising strategy for bioplastic production in high biomass crops

Tilbrook, K., Gebbie, L. K., McQualter, R. B., Petrasovits, L. A., Schenk, P., Poirier, Y. and Brumbley, S. M. (2011). Peroxisomal polyhydroxyalkanoate biosynthesis is a promising strategy for bioplastic production in high biomass crops. In: 32nd Australasian Polymer Symposium Proceedings, The Novotel Pacific Bay Resort, Coffs Harbour, Australia, (). 13-16 February.

PHB production in plant peroxisomes

Tilbrook, Kimberley T., Poirier, Yves, McQualter, Richard B., Gnanasambandam, Annathurai, Schenk, Peer M. and Brumbley Stevens M. (2010). PHB production in plant peroxisomes. In: Abstracts for the Plant & Animal Genome XVIII Conference. Plant & Animal Genome XVIII Conference, San Diego, CA, United States, (). 9-13 January 2010.

Transcriptional profiling of photosynthetic genes during photo-biological hydrogen production in the green alga chlamydomonas reinhardtii

Schenk, Peer M., Thomas-Hall, Skye, Nguyen, Anh Vu, Malnoë, Alizée, Timmins, Matthew, Stephens, Evan, Mussgnug, Jan H., Rupprecht, Jens, Kruse, Olaf and Hankamer, Ben (2008). Transcriptional profiling of photosynthetic genes during photo-biological hydrogen production in the green alga chlamydomonas reinhardtii. In: , , (21-24). .

Plant–microbe and Plant–insect Interactions Meet Common Grounds

Schenk, P. M. P., McGrath, K. C., Lorito, M. and Pieterse, C. M. J. (2008) Plant–microbe and Plant–insect Interactions Meet Common Grounds. New Phytologist, 179 2: 251-256. doi:10.1111/j.1469-8137.2008.02538.x

Knowledge of soil biology to reduce nitrogen loss as N2O from sugarcane farming

McGrath, K., Brackin, R.T., Lakshmanan, P., Schenk, P.M.P. and Schmidt, S. (2008). Knowledge of soil biology to reduce nitrogen loss as N2O from sugarcane farming. In: Bruce, R.C., Proceedings of the Australian Society of Sugar Cane Technologies. Conference of the Australian Society of Sugar Cane Technologies, Townsville, Australia, (115-126). 29 April - 2 May 2008.

Knowledge of soil biology to reduce nitrogen loss as N2O from sugarcane farming

Mcgrath, K., Brackin, R., Lakshmanan, P., Schenk, P. and Schmidt, S. (2008). Knowledge of soil biology to reduce nitrogen loss as N2O from sugarcane farming. In: , , (115-124). .

Peroxisomal PHB production in plants

Brumbley, S. M., Gnanasambandam, A., Schenk, P. and Tilbrook, K. (2008). Peroxisomal PHB production in plants. In: International Symposium on Biological Polyesters, Auckland, NZ, (). 23-28 November 2008.

Transcriptional profiling of photosynthetic genes during photo-biological hydrogen production in the green alga Chlamydomonas reinhardtii

Schenk, P.M.P., Thomas-Hall, S.R., Nguyen, A.V., Malnoe, A., Timmins, M., Stephens, E., Mussgnug, J.H., Rupprecht, J., Kruse, O. and Hankamer, B. (2008). Transcriptional profiling of photosynthetic genes during photo-biological hydrogen production in the green alga Chlamydomonas reinhardtii. In: WHEC2008. 17th World Hydrogen Energy Conference, Brisbane, Qld, Australia, (108-111). 15-19 June, 2008.

The Solar Bio-fuels consortium: Developing advanced bio-fuel production systems

Hankamer, B., Schenk, P., Marx, U., Posten, C. and Kruse, O. (2007). The Solar Bio-fuels consortium: Developing advanced bio-fuel production systems. In: Photosynthesis Research: Abstracts: 14th International Congress of Photosynthesis. 14th International Congress of Photosynthesis, Glasgow, Scotland, (136-136). 22-27 July 2007. doi:10.1007/s11120-007-9197-6

Transcription factor genes controlling plant defence

Manners, J., Kazan, K., McGrath, K., Dombrecht, B., Edgar, C., Thomas-Hall, S., Schenk, P. M. and Desmond, O. (2005). Transcription factor genes controlling plant defence. In: Prof Clem Robinson, ComBio2005 Combined Conference Abstracts. ComBio2005, Adelaide Convention Centre, (45-45). 25 - 29 September, 2005.

AtERF2 is a positive regulator of defence gene expression in Arabidopsis

McGrath, K. C., Kazan, K., Schenk, P. M. P., Manners, J. and Maclean, D. J. (2004). AtERF2 is a positive regulator of defence gene expression in Arabidopsis. In: I.Witt, International Conference on Arabidopsis Research. International Conference on Arabidopsis Research, Berlin, (). 11-14 July, 2004.

Plant defence signaling in Arabidopsis

Schenk, P. M. P., Anderson, J., Badruzsaufari, B., Desmond, O. J., Thomas-Hall, S. R., McGrath, K. C., Timmins, M., Maclean, D. J., Ebert, P. R., Manners, J. and Kazan, K. (2004). Plant defence signaling in Arabidopsis. In: C. Robinson, ComBio 2004. ComBio2004, Perth, Australia, (30). 26-30 September, 2004.

Wheat Defence responses induced by Fusarium pseudograminearum

Desmond, O. J., Kazan, K., Manners, J., Schenk, P. M. P. and Maclean, D. J. (2004). Wheat Defence responses induced by Fusarium pseudograminearum. In: C. Robinson, ComBio 2004. ComBio2004, Perth, Australia, (89). 26-30 September, 2004.

Promoters from Australian Banana streak Badna-Virus (BSV) isolates drive transgene expression in Banana, Sugarcane and Tobacco

Remans, T., Schenk, P. M., Elliot, A. R., Sagi, L., Geering, A. D., McMichael, L. A., Thomas, J.E., Swennen, R. L., Grof, C. P., Manners, J. and Ebert, P.R. (1999). Promoters from Australian Banana streak Badna-Virus (BSV) isolates drive transgene expression in Banana, Sugarcane and Tobacco. In: Combined Conference Abstracts: 43rd Annual ASBMB, 18th Annual ANZSCDB and 39th Annual ASPP. ComBio 99, Conrad Jupiters, Gold Coast, (Pos-Wed-04). 27-30 September, 1999.