Protein trafficking in disease
The highly co-ordinated movement of the thousands of distinct membrane proteins between the cell surface and intracellular compartments is a critical factor in health and disease. This movement controls the organisation of cells in tissues and communication between cells and their environment. The success of this process depends on the regulated sorting and trafficking of proteins within the highly dynamic endosomal compartments of the cell in processes that are emerging as important drivers of neurodegenerative disease, cancer and metabolic pathologies. An understanding of how endosomal traffic is regulated, and how lysosomal traffic and degradation are modulated, is critical for providing insights into disease and devising new therapeutic approaches.
Major Undergraduate Teaching Activity
SBMS Honours Coordinator (BIOM6501/2 & BIOM6191/2)
BSc Cell Biology Major Convenor
BIOL2200 – Molecular Cell Biology I Lecturer and practical cooridinator
BIOL3006 – Molecular Cell Biology II Lecturer
BIOM2222 - Advanced Techniques in Biomedical Science Lecturer
Student Supervisor for Research Projects in Biomedical Sciences (SCIE3220/1 or Honours)
Journal Article: Sugar transporter Slc37a2 regulates bone metabolism in mice via a tubular lysosomal network in osteoclasts
Ng, Pei Ying, Ribet, Amy B. P., Guo, Qiang, Mullin, Benjamin H., Tan, Jamie W. Y., Landao-Bassonga, Euphemie, Stephens, Sébastien, Chen, Kai, Yuan, Jinbo, Abudulai, Laila, Bollen, Maike, Nguyen, Edward T. T. T., Kular, Jasreen, Papadimitriou, John M., Søe, Kent, Teasdale, Rohan D., Xu, Jiake, Parton, Robert G., Takayanagi, Hiroshi and Pavlos, Nathan J. (2023). Sugar transporter Slc37a2 regulates bone metabolism in mice via a tubular lysosomal network in osteoclasts. Nature Communications, 14 (1) 906, 1-23. doi: 10.1038/s41467-023-36484-2
Journal Article: Multifaceted roles of retromer in EGFR trafficking and signaling activation
Yang, Zhe, Feng, Zhengyang, Li, Zebin and Teasdale, Rohan D. (2022). Multifaceted roles of retromer in EGFR trafficking and signaling activation. Cells, 11 (21) 3358, 1-17. doi: 10.3390/cells11213358
Journal Article: De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex
Chen, Kai-En, Guo, Qian, Hill, Timothy A., Cui, Yi, Kendall, Amy K., Yang, Zhe, Hall, Ryan J., Healy, Michael D., Sacharz, Joanna, Norwood, Suzanne J., Fonseka, Sachini, Xie, Boyang, Reid, Robert C., Leneva, Natalya, Parton, Robert G., Ghai, Rajesh, Stroud, David A., Fairlie, David P, Suga, Hiroaki, Jackson, Lauren P., Teasdale, Rohan D., Passioura, Toby and Collins, Brett M. (2021). De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex. Science Advances, 7 (49) eabg4007, eabg4007. doi: 10.1126/sciadv.abg4007
The functional architecture of a unique family of lipid droplet proteins
(2023–2026) ARC Discovery Projects
Organising Intracellular Compartments by Formation of Transport Carriers
(2021–2023) ARC Discovery Projects
(2018–2021) University of Western Australia
How does retrograde protein trafficking dysfunction cause Parkinson's Disease?
Master Philosophy
Deciphering the endosomal machinery for GLUT4 trafficking and its role in diabetes
Doctor Philosophy
Defining the molecular action of retromer in retrograde trafficking pathways
(2019) Doctor Philosophy
Enhancement of Retromer Function in Parkinson Disease
Retromer is responsible for coordinating protein trafficking from the endosomal compartment and its function has been directly associated with causing Parkinson’s Disease. Using cell models we have preliminary data that the enhancement of retromer function reduces the pathological changes within cells. This PhD project will examine ways to enhance the function of retromer and determine if it can prevent the progression of Parkinson Disease. This project will involve the development of cell and animal models to evaluate this hypothesis.
Define the roles of the SNX-RGS proteins in membrane tethering and lipid homeostasis in adipocytes
Sorting nexins (SNXs) are a large family of proteins that are all associated with endomembrane compartments. The four human proteins, SNX14, SNX13, SNX19 and SNX25, comprise a unique sub-family referred to as the SNX- RGS molecules. However, the precise function of these proteins is still not clear, and how they work at the molecular level is largely unknown. Within the HDR project the expression and localisation of these proteins in adipocytes will be examined to determine if these SNX-RGS molecules associated with lipid droplets that formation when adipocytes differeientiate. The requirement of these molecules will be tested in knock-out cell models in combination with structure-function mutants.
Cancer insights through macropinocytosis: a role for sorting nexins?
Wang, Jack T. H., Kerr, Markus and Teasdale, Rohan D. (2014). Cancer insights through macropinocytosis: a role for sorting nexins?. The research and biology of Cancer I. (pp. 1-23) edited by iConcept Press. Hong Kong, China: iConcept Press.
Kerr, M. C., Castro, N. A., Karunaratne, S. and Teasdale, R. D. (2012). The phosphoinositides: key regulators of Salmonella containing vacuole (SCV) trafficking and identity. Salmonella - distribution, adaptation, control measures and molecular technologies. (pp. 251-264) edited by Bassam A. Annous and Joshua B. Gurtler. Rijeka, Croatia: InTech. doi: 10.5772/30761
Hamilton, Nicholas, Kerr, Markus, Burrage, Kevin and Teasdale, Rohan D. (2007). Analyzing real-time video microscopy: the dyamics and geometry of vescicles and tubules in endocytosis. Current Protocols in Cell Biology. (pp. 4.16.1-1.16.11) edited by Bonifacio, J. S., Dasso, M., Harford, J. B., Lippincott-Schwartz, J. and Yamada K. M.. Hoboken, NJ United States: John Wiley & Sons. doi: 10.1002/0471143030.cb0416s35
Expression and localization of proteins in mammalian cells
Stow, J. L. and Teasdale, R. D. (2005). Expression and localization of proteins in mammalian cells. Encyclopedia of Genetics, Genomics, Proteomics and Bioformatics. (pp. ---) edited by P S E Little and J S E Quackenbush. London, England: John Wiley & Sons. doi: 10.1002/047001153x.g208202
Ng, Pei Ying, Ribet, Amy B. P., Guo, Qiang, Mullin, Benjamin H., Tan, Jamie W. Y., Landao-Bassonga, Euphemie, Stephens, Sébastien, Chen, Kai, Yuan, Jinbo, Abudulai, Laila, Bollen, Maike, Nguyen, Edward T. T. T., Kular, Jasreen, Papadimitriou, John M., Søe, Kent, Teasdale, Rohan D., Xu, Jiake, Parton, Robert G., Takayanagi, Hiroshi and Pavlos, Nathan J. (2023). Sugar transporter Slc37a2 regulates bone metabolism in mice via a tubular lysosomal network in osteoclasts. Nature Communications, 14 (1) 906, 1-23. doi: 10.1038/s41467-023-36484-2
Multifaceted roles of retromer in EGFR trafficking and signaling activation
Yang, Zhe, Feng, Zhengyang, Li, Zebin and Teasdale, Rohan D. (2022). Multifaceted roles of retromer in EGFR trafficking and signaling activation. Cells, 11 (21) 3358, 1-17. doi: 10.3390/cells11213358
Chen, Kai-En, Guo, Qian, Hill, Timothy A., Cui, Yi, Kendall, Amy K., Yang, Zhe, Hall, Ryan J., Healy, Michael D., Sacharz, Joanna, Norwood, Suzanne J., Fonseka, Sachini, Xie, Boyang, Reid, Robert C., Leneva, Natalya, Parton, Robert G., Ghai, Rajesh, Stroud, David A., Fairlie, David P, Suga, Hiroaki, Jackson, Lauren P., Teasdale, Rohan D., Passioura, Toby and Collins, Brett M. (2021). De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex. Science Advances, 7 (49) eabg4007, eabg4007. doi: 10.1126/sciadv.abg4007
Retromer dependent changes in cellular homeostasis and Parkinson’s disease
Yang, Zhe, Li, Zebin and Teasdale, Rohan D. (2021). Retromer dependent changes in cellular homeostasis and Parkinson’s disease. Essays in Biochemistry, 65 (7), 987-998. doi: 10.1042/ebc20210023
Cui, Yi, Yang, Zhe, Flores‐Rodriguez, Neftali, Follett, Jordan, Ariotti, Nicholas, Wall, Adam A., Parton, Robert G. and Teasdale, Rohan D. (2021). Formation of retromer transport carriers is disrupted by the Parkinson disease‐linked Vps35 D620N variant. Traffic, 22 (4) tra.12779, 123-136. doi: 10.1111/tra.12779
Ariotti, Nicholas, Wu, Yeping, Okano, Satomi, Gambin, Yann, Follett, Jordan, Rae, James, Ferguson, Charles, Teasdale, Rohan D., Alexandrov, Kirill, Meunier, Frederic A., Hill, Michelle M. and Parton, Robert G. (2020). An inverted CAV1 (caveolin 1) topology defines novel autophagy-dependent exosome secretion from prostate cancer cells. Autophagy, 17 (9), 1-17. doi: 10.1080/15548627.2020.1820787
Carosi, Julian M., Hattersley, Kathryn J., Cui, Yi, Yang, Zhe, Teasdale, Rohan D. and Sargeant, Timothy J. (2019). Subcellular fractionation of HeLa cells for lysosome enrichment using a continuous Percoll-density gradient. Bio-Protocol, 9 (18) e3362, e3362. doi: 10.21769/BioProtoc.3362
Milne, Michael R., Qian, Lei, Turnbull, Marion T., Kinna, Genevieve, Collins, Brett M., Teasdale, Rohan D. and Coulson, Elizabeth J. (2019). Downregulation of SNX27 expression does not exacerbate amyloidogenesis in the APP/PS1 Alzheimer's disease mouse model. Neurobiology of Aging, 77, 144-153. doi: 10.1016/j.neurobiolaging.2019.01.011
Chandra, Mintu, Chin, Yanni K.-Y., Mas, Caroline, Feathers, J. Ryan, Paul, Blessy, Datta, Sanchari, Chen, Kai-En, Jia, Xinying, Yang, Zhe, Norwood, Suzanne J., Mohanty, Biswaranjan, Bugarcic, Andrea, Teasdale, Rohan D., Henne, W. Mike, Mobli, Mehdi and Collins, Brett M. (2019). Classification of the human phox homology (PX) domains based on their phosphoinositide binding specificities. Nature Communications, 10 (1) 1528, 1528. doi: 10.1038/s41467-019-09355-y
A role of GCC88 in the retrograde transport of CI-M6PR and the maintenance of lysosomal activity
Cui, Yi, Yang, Zhe and Teasdale, Rohan D. (2019). A role of GCC88 in the retrograde transport of CI-M6PR and the maintenance of lysosomal activity. Cell Biology International, 43 (11) cbin.11118, 1234-1244. doi: 10.1002/cbin.11118
Retromer has a selective function in cargo sorting via endosome transport carriers
Cui, Yi, Carosi, Julian M., Yang, Zhe, Ariotti, Nicholas, Kerr, Markus C., Parton, Robert G., Sargeant, Timothy J. and Teasdale, Rohan D. (2018). Retromer has a selective function in cargo sorting via endosome transport carriers. The Journal of Cell Biology, 218 (2), jcb.201806153-631. doi: 10.1083/jcb.201806153
Structure of the membrane-assembled retromer coat determined by cryo-electron tomography
Kovtun, Oleksiy, Leneva, Natalya, Bykov, Yury S., Ariotti, Nicholas, Teasdale, Rohan D., Schaffer, Miroslava, Engel, Benjamin D., Owen, David. J., Briggs, John A. G. and Collins, Brett M. (2018). Structure of the membrane-assembled retromer coat determined by cryo-electron tomography. Nature, 561 (7724), 561-+. doi: 10.1038/s41586-018-0526-z
Sorting Nexin 27 (SNX27) regulates the trafficking and activity of the glutamine transporter ASCT2
Yang, Zhe, Follett, Jordan, Kerr, Markus C., Clairfeuille, Thomas, Chandra, Mintu, Collins, Brett M. and Teasdale, Rohan D. (2018). Sorting Nexin 27 (SNX27) regulates the trafficking and activity of the glutamine transporter ASCT2. Journal of Biological Chemistry, 293 (18), 6802-6811. doi: 10.1074/jbc.RA117.000735
The functional roles of retromer in Parkinson's disease
Cui, Yi, Yang, Zhe and Teasdale, Rohan D. (2017). The functional roles of retromer in Parkinson's disease. FEBS Letters, 592 (7), 1096-1112. doi: 10.1002/1873-3468.12931
SNX27 links DGKζ to the control of transcriptional and metabolic programs in T lymphocytes
Tello-Lafoz, M., Rodríguez-Rodríguez, C., Kinna, G., Loo, L. S., Hong, W., Collins, B. M., Teasdale, R. D. and Mérida, I. (2017). SNX27 links DGKζ to the control of transcriptional and metabolic programs in T lymphocytes. Scientific Reports, 7 (1) 16361, 1-14. doi: 10.1038/s41598-017-16370-w
Liebl, David, Qi, Xiaying, Zhe, Yang, Barnett, Timothy C. and Teasdale, Rohan D. (2017). SopB-mediated recruitment of SNX18 facilitates Salmonella typhimurium internalization by the host cell. Frontiers in Cellular and Infection Microbiology, 7 (JUN) 257. doi: 10.3389/fcimb.2017.00257
Salmonella effector SopD2 interferes with Rab34 function
Teo, Wei Xuan, Yang, Zhe, Kerr, Markus Charles, Luo, Lin, Guo, Zhong, Alexandrov, Kirill, Stow, Jenny Lea and Teasdale, Rohan David (2017). Salmonella effector SopD2 interferes with Rab34 function. Cell Biology International, 41 (4), 433-446. doi: 10.1002/cbin.10739
Laser-mediated rupture of chlamydial inclusions triggers pathogen egress and host cell necrosis
Kerr, Markus C., Gomez, Guillermo A., Ferguson, Charles, Tanzer, Maria C., Murphy, James M., Yap, Alpha S., Parton, Robert G., Huston, Wilhelmina M. and Teasdale, Rohan D. (2017). Laser-mediated rupture of chlamydial inclusions triggers pathogen egress and host cell necrosis. Nature Communications, 8 (1) 14729, 14729. doi: 10.1038/ncomms14729
Structural basis for the hijacking of endosomal sorting nexin proteins by Chlamydia trachomatis
Paul, Blessy, Kim, Hyun Sung, Kerr, Markus C., Huston, Wilhelmina M., Teasdale, Rohan D. and Collins, Brett M. (2017). Structural basis for the hijacking of endosomal sorting nexin proteins by Chlamydia trachomatis. eLife, 6 (e22311) e22311, 1-23. doi: 10.7554/eLife.22311
Retromer’s role in endosomal trafficking and impaired function in neurodegenerative diseases
Follett, Jordan, Bugarcic, Andrea, Collins, Brett M. and Teasdale, Rohan D. (2017). Retromer’s role in endosomal trafficking and impaired function in neurodegenerative diseases. Current Protein and Peptide Science, 18 (7), 687-701. doi: 10.2174/1389203717666160311121246
A molecular code for endosomal recycling of phosphorylated cargos by the SNX27–retromer complex
Clairfeuille, Thomas, Mas, Caroline, Chan, Audrey S. M., Yang, Zhe, Tello-Lafoz, Maria, Chandra, Mintu, Wigagdo, Jocelyn, Kerr, Markus, Blessy, Paul, Merida, Isabel, Teasdale, Rohan D., Pavlos, Nathan J., Anggono, Victor and Collins, Brett (2016). A molecular code for endosomal recycling of phosphorylated cargos by the SNX27–retromer complex. Nature Structural and Molecular Biology, 23 (10), 921-932. doi: 10.1038/nsmb.3290
MTMR4 is required for the stability of the salmonella-containing vacuole
Teo, Wei X., Kerr, Markus C. and Teasdale, Rohan D. (2016). MTMR4 is required for the stability of the salmonella-containing vacuole. Frontiers in Cellular and Infection Microbiology, 6 (91) 91, 1-11. doi: 10.3389/fcimb.2016.00091
Follett, Jordan, Bugarcic, Andrea, Yang, Zhe, Ariotti, Nicholas, Norwood, Suzanne J., Collins, Brett M., Parton, Robert G. and Teasdale, Rohan D. (2016). Parkinson disease-linked Vps35 R524W mutation impairs the endosomal association of retromer and induces α-synuclein aggregation. Journal of Biological Chemistry, 291 (35), 18283-18298. doi: 10.1074/jbc.M115.703157
Sortilin is associated with the chlamydial inclusion and is modulated during infection
Teo, Wei Xuan, Kerr, Markus Charles, Huston, Wilhelmina May and Teasdale, Rohan David (2016). Sortilin is associated with the chlamydial inclusion and is modulated during infection. Biology Open, 5 (4), 429-435. doi: 10.1242/bio.016485
Chan, Audrey S. M., Clairfeuille, Thomas, Landao-Bassonga, Euphemie, Kinna, Genevieve, Ng, Pei Ying, Loo, Li Shen, Cheng, Tak Sum, Zheng, Minghao, Hong, Wanjin, Teasdale, Rohan D., Collins, Brett M. and Pavlos, Nathan J (2016). Sorting nexin 27 couples PTHR trafficking to retromer for signal regulation in osteoblasts during bone growth. Molecular Biology of the Cell, 27 (8), 1367-1382. doi: 10.1091/mbc.E15-12-0851
Yang, Zhe, Hong, Lee Kian, Follett, Jordan, Wabitsch, Martin, Hamilton, Nicholas A., Collins, Brett, Bugarcic, Andrea and Teasdale, Rohan D. (2016). Functional characterization of retromer in GLUT4 storage vesicle formation and adipocyte differentiation. The FASEB Journal, 39 (3), 1037-1050. doi: 10.1096/fj.15-274704
Ariotti, Nicholas, Hall, Thomas, Rae, James, Ferguson, Charles, McMahon, Kerrie-Ann, Martel, Nick, Webb, Robyn E., Webb, Richard I., Teasdale, Rohan D. and Parton, Robert G. (2015). Modular detection of GFP-labeled proteins for rapid screening by electron microscopy in cells and organisms. Developmental Cell, 35 (4), 513-525. doi: 10.1016/j.devcel.2015.10.016
Vps26B-retromer negatively regulates plasma membrane resensitization of PAR-2
Bugarcic, Andrea, Vetter, Irina, Chalmers, Silke, Kinna, Genevieve, Collins, Brett M. and Teasdale, Rohan D. (2015). Vps26B-retromer negatively regulates plasma membrane resensitization of PAR-2. Cell Biology International, 39 (11), 1299-1306. doi: 10.1002/cbin.10508
Yang, Zhe, Soderholm, Amelia, Lung, Tania Wong Fok, Giogha, Cristina, Hill, Michelle M., Brown, Nathaniel F., Hartland, Elizabeth and Teasdale, Rohan D. (2015). SseK3 is a salmonella effector that binds trim32 and modulates the host's nf-kappa b signalling activity. PL o S One, 10 (9) e0138529, 1-20. doi: 10.1371/journal.pone.0138529
Clairfeuille, Thomas, Norwood, Suzanne J., Qi, Xiaying, Teasdale, Rohan D. and Collins, Brett M. (2015). Structure and membrane binding properties of the endosomal tetratricopeptide repeat (TPR) domain-containing sorting nexins SNX20 and SNX21. Journal of Biological Chemistry, 290 (23), 14504-14517. doi: 10.1074/jbc.M115.650598
Ghai, Rajesh, Tello-Lafoz, Maria, Norwood, Suzanne J., Yang, Zhe, Clairefeuille, Thomas, Teasdale, Rohan D., Mérida, Isabel and Collins, Brett M. (2015). Phosphoinositide binding by the SNX27 FERM domain regulates localisation at the immune synapse of activated T-cells. Journal of Cell Science, 128 (3), 553-565. doi: 10.1242/jcs.158204
King, Nathan P., Newton, Patrice, Schuelein, Ralf, Brown, Darren L., Petru, Marketa, Zarsky, Vojtech, Dolezal, Pavel, Luo, Lin, Bugarcic, Andrea, Stanley, Amanda C., Murray, Rachael Z., Collins, Brett M., Teasdale, Rohan D., Hartland, Elizabeth L. and Stow, Jennifer L. (2015). Soluble NSF attachment protein receptor molecular mimicry by a Legionella pneumophila Dot/Icm effector. Cellular Microbiology, 17 (6), 767-784. doi: 10.1111/cmi.12405
Mas, Caroline, Norwood, Suzanne J., Bugarcic, Andrea, Kinna, Genevieve, Leneva, Natalya, Kovtun, Oleksiy, Ghai, Rajesh, Yanez, Lorena E. Ona, Davis, Jasmine L., Teasdale, Rohan D. and Collins, Brett M. (2014). Structural basis for different phosphoinositide specificities of the PX domains of sorting nexins regulating G-protein signaling. Journal of Biological Chemistry, 289 (41), 28554-28568. doi: 10.1074/jbc.M114.595959
Teasdale, Rohan D. and Collins, Brett (2014). Little evidence that FAM65B belongs to the family of phox homology (PX) and bin/amphiphysin/rvs (BAR) domain-containing proteins. PNAS: Proceedings of the National Academy of Sciences of the United States of America, 111 (39), E4064-E4064. doi: 10.1073/pnas.1412755111
Gallon, Matthew, Clairfeuille, Thomas, Steinberg, Florian, Mas, Caroline, Ghai, Rajesh, Sessions, Richard B., Teasdale, Rohan D., Collins, Brett M. and Cullen, Peter J. (2014). A unique PDZ domain and arrestin-like fold interaction reveals mechanistic details of endocytic recycling by SNX27-retromer. Proceedings of the National Academy of Sciences of the United States of America, 111 (35), E3604-E3613. doi: 10.1073/pnas.1410552111
Introduction to special issue on endosome dynamics
Teasdale, Rohan D. and Collins, Brett M. (2014). Introduction to special issue on endosome dynamics. Seminars in Cell and Developmental Biology, 31, 1-1. doi: 10.1016/j.semcdb.2014.05.001
Live imaging of endosome dynamics
Kerr, Markus and Teasdale, Rohan D. (2014). Live imaging of endosome dynamics. Seminars in Cell and Developmental Biology, 31, 11-19. doi: 10.1016/j.semcdb.2014.03.027
Follett, Jordan, Norwood, Suzanne J., Hamilton, Nicholas A., Mohan, Megha, Kovtun, Oleksiy, Tay, Stephanie, Yang, Zhe, Wood, Stephen A., Mellick, George D., Silburn, Peter A., Collins, Brett M., Bugarcic, Andrea and Teasdale, Rohan D. (2014). The Vps35 D620N mutation linked to Parkinson's disease disrupts the cargo sorting function of retromer. Traffic, 15 (2), 230-244. doi: 10.1111/tra.12136
Macropinosome quantitation assay
Wang, Jack T. H., Teasdale, Rohan D. and Liebl, David (2014). Macropinosome quantitation assay. MethodsX, 1 (1), 36-41. doi: 10.1016/j.mex.2014.05.002
Barnett, Timothy C., Liebl, David, Seymour, Lisa M., Gillen, Christine M., Lim, Jin Yan, LaRock, Christopher N., Davies, Mark R., Schulz, Benjamin L., Nizet, Victor, Teasdale, Rohan D. and Walker, Mark J. (2013). The globally disseminated M1T1 clone of Group A Streptococcus evades autophagy for intracellular replication. Cell Host and Microbe, 14 (6), 675-682. doi: 10.1016/j.chom.2013.11.003
Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins
Ghai, Rajesh, Bugarcic, Andrea, Liu, Huadong, Norwood, Suzanne J., Skeldal, Sune, Coulson, Elizabeth J., Li, Shawn Shun-Cheng, Teasdale, Rohan D. and Collins, Brett M. (2013). Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins. Proceedings of the National Academy of Sciences of the United States of America, 110 (8), E643-E652. doi: 10.1073/pnas.1216229110
Verma, Suzie, Han, Siew Ping, Michael, Magdalene, Gomez, Guillermo, Yang, Zhe, Teasdale, Rohan D., Ratheesh, Aparna, Kovacs, Eva M., Ali, Radiya G. and Yap, Alpha S.K. (2012). A WAVE2-Arp2/3 actin nucleator apparatus supports junctional tension at the epithelial zonula adherens. Molecular Biology of The Cell, 23 (23), 4601-4610. doi: 10.1091/mbc.E12-08-0574
A novel type III endosome transmembrane protein, TEMP
Aturaliya, Rajith, Kerr, Markus and Teasdale, Rohan D. (2012). A novel type III endosome transmembrane protein, TEMP. Cells, 1 (4), 1029-1044. doi: 10.3390/cells1041029
SNX5 is essential for efficient macropinocytosis and antigen processing in primary macrophages
Lim, Jet Phey, Teasdale, Rohan D. and Gleeson, Paul A. (2012). SNX5 is essential for efficient macropinocytosis and antigen processing in primary macrophages. Biology Open, 1 (9), 904-914. doi: 10.1242/bio.20122204
Celik, Nermin, Webb. Chaukke T., Leyton, Denusse L., Holt, Kathryn E., Heinz, Eva, Gorrell, Rebecca, Kwok, Terry, Naderer, Thomas, Strugnell, Richard A., Speed, Terence P., Teasdale, Rohan D., Likic, Valdimir A. and Lithgow, Trevor (2012). A bioinformatic strategy for the detection, classification and analysis of bacterial autotransporters. PLoS One, 7 (8 Article. No. 43245) e43245, e43245-1-e43245-15. doi: 10.1371/journal.pone.0043245
Teasdale, Rohan D. and Collins, Brett M. (2012). Insights into the PX (phox-homology) domain and SNX (sorting nexin) protein families: structures, functions and roles in disease. Biochemical Journal, 441 (Part 1), 39-59. doi: 10.1042/BJ20111226
VPS26A and VPS26B subunits define distinct Retromer complexes
Bugarcic, Andrea, Yang, Zhe, Kerr, Markus C., Griffith, John Griffin, Collins, Brett M. and Teasdale, Rohan D. (2011). VPS26A and VPS26B subunits define distinct Retromer complexes. Traffic, 12 (12), 1759-1773. doi: 10.1111/j.1600-0854.2011.01284.x
Ghai, Rajesh, Mobli, Mehdi, Norwood, Suzanne J., Bugarcic, Andrea, Teasdale, Rohan D., King, Glenn F. and Collins, Brett M. (2011). Phox homology band 4.1/ezrin/radixin/moesin-like proteins function as molecular scaffolds that interact with cargo receptors and Ras GTPases. Proceedings of the National Academy of Sciences of the United States of America, 108 (19), 7763-7768. doi: 10.1073/pnas.1017110108
Assembly and solution structure of the core retromer protein complex
Norwood, SJ, Shaw, DJ, Cowieson, NP, Owen, DJ, Teasdale, RD and Collins, BM (2011). Assembly and solution structure of the core retromer protein complex. Traffic, 12 (1), 56-71. doi: 10.1111/j.1600-0854.2010.01124.x
Wang, Jth, Kerr, MC, Karunaratne, S, Jeanes, A, Yap, AS and Teasdale, RD (2010). The SNX-PX-BAR family in macropinocytosis: The regulation of macropinosome formation by SNX-PX-BAR proteins. PLoS One, 5 (10) e13763, e13763-1-e13763-13. doi: 10.1371/journal.pone.0013763
Low, Pei Ching, Misaki, Ryo, Schroder, Kate, Stanley, Amanda C., Sweet, Matthew J., Teasdale, Rohan D., Vanhaesebroeck, Bart, Meunier, Frédéric A., Taguchi, Tomohiko and Stow, Jennifer L. (2010). Phosphoinositide 3-kinase δ regulates membrane fission of Golgi carriers for selective cytokine secretion. Journal of Cell Biology, 190 (6), 1053-1065. doi: 10.1083/jcb.201001028
An atlas of combinatorial transcriptional regulation in mouse and man
Ravasi, Timothy, Suzuki, Harukazu, Cannistraci, Carlo Vittorio, Katayama, Shintaro, Bajic, Vladimir B., Tan, Kai, Akalin, Altuna, Schmeier, Sebastian, Kanamori-Katayama, Mutsumi, Bertin, Nicolas, Carninci, Piero, Daub, Carsten O., Forrest, Alistair R.R., Gough, Julian, Grimmond, Sean, Han, Jung-Hoon, Hashimoto, Takehiro, Hide, Winston, Hofmann, Oliver, Kamburov, Atanas, Kaur, Mandeep, Kawaji, Hideya, Kubosaki, Atsutaka, Lassmann, Timo, van Nimwegen, Erik, MacPherson, Cameron Ross, Ogawa, Chihiro, Radovanovic, Aleksandar, Schwartz, Ariel ... Hayashizaki, Yoshihide (2010). An atlas of combinatorial transcriptional regulation in mouse and man. Cell, 141 (2), 369. doi: 10.1016/j.cell.2010.04.004
Inhibition of the PtdIns(5) kinase PIKfyve disrupts intracellular replication of Salmonella
Kerr, Markus C., Wang, Jack T. H., Castro, Natalie A., Hamilton, Nicholas A., Town, Liam, Brown, Darren L., Meunier, Frederic A., Brown, Nat F., Stow, Jennifer L. and Teasdale, Rohan D. (2010). Inhibition of the PtdIns(5) kinase PIKfyve disrupts intracellular replication of Salmonella. EMBO Journal, 29 (8), 1331-1347. doi: 10.1038/emboj.2010.28
Redirection of renal mesenchyme to stromal and chondrocytic fates in the presence of TGF-β2
Sims-Lucas, Sunder, Young, Richard J., Martinez, Gemma, Taylor, Darrin, Grimmond, Sean M., Teasdale, Rohan, Little, Melissa H., Bertram, John F. and Caruana, Georgina (2010). Redirection of renal mesenchyme to stromal and chondrocytic fates in the presence of TGF-β2. Differentiation, 79 (4-5), 272-284. doi: 10.1016/j.diff.2010.01.004
An atlas of combinatorial transcriptional regulation in mouse and man
Ravasi, Timothy, Suzuki, Harukazu, Cannistraci, Carlo Vittorio, Katayama, Shintaro, Bajic, Vladimir B., Tan, Kai, Akalin, Altuna, Schmeier, Sebastian, Kanamori-Katayama, Mutsumi, Carninci, Piero, Bertin, Nicholas, Daub, Cartsten O., Forrest, Alistair R. R., Gough, Julian, Grimmond, Sean, Han, Jung-Hoon, Hashimoto, Takehiro, Hide, Winston, Hofmann, Oliver, Kamburov, Atanas, Kaur, Mandeep, Kawaji, Hideya, Kubosaki, Atsutaka, Lassmann, Timo, van Nimwegen, Erik, MacPherson, Cameron Ross, Ogawa, Chihiro, Radovanovic, Aleksandar, Schwartz, Ariel ... Hayashizaki, Yoshihide (2010). An atlas of combinatorial transcriptional regulation in mouse and man. Cell, 140 (5), 744-752. doi: 10.1016/j.cell.2010.01.044
Suzuki, H, Forrest, ARR, van Nimwegen, E, Daub, CO, Balwierz, PJ, Irvine, KM, Lassmann, T, Ravasi, T, Hasegawa, Y, de Hoon, MJL, Katayama, S, Schroder, K, Carninci, P, Tomaru, Y, Kanamori-Katayama, M, Kubosaki, A, Akalin, A, Ando, Y, Arner, E, Asada, M, Asahara, H, Bailey, T, Bajic, VB, Bauer, D, Beckhouse, AG, Bertin, N, Bjorkegren, J, Brombacher, F, Bulger, E ... Riken Omics Science Center (2009). The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line. Nature Genetics, 41 (5), 553-562. doi: 10.1038/ng.375
Kerr, M. C. and Teasdale, R. D. (2009). Defining macropinocytosis. Traffic, 10 (4), 364-371. doi: 10.1111/j.1600-0854.2009.00878.x
Statistical and visual differentiation of subcellular imaging
Hamilton, Nicholas A., Wang, Jack T. H., Kerr, Markus C. and Teasdale, Rohan. D. (2009). Statistical and visual differentiation of subcellular imaging. BMC Bioinformatics, 10 (1) 94, 94.1-94.12. doi: 10.1186/1471-2105-10-94
A role of SNX5 in the regulation of macropinocytosis
Lim, Jet Phey, Wang, Jack T. H., Kerr, Markus C., Teasdale, Rohan D. and Gleeson, Paul A. (2008). A role of SNX5 in the regulation of macropinocytosis. BMC Cell Biology, 9 (1) 58, 58.1-58.12. doi: 10.1186/1471-2121-9-58
Determining nucleolar association from sequence by leveraging protein-protein interactions
Boden, M. and Teasdale, R. D. (2008). Determining nucleolar association from sequence by leveraging protein-protein interactions. Journal of Computational Biology, 15 (3), 291-304. doi: 10.1089/cmb.2007.0163
Structure of Vps26B and Mapping of its Interaction with the Retromer Protein Complex
Collins, Brett M., Norwood, Suzanne J., Kerr, Markus C., Mahony, Donna, Seaman, Matthew N. J. and Teasdale, Rohan D. (2008). Structure of Vps26B and Mapping of its Interaction with the Retromer Protein Complex. Traffic, 9 (3), 366-379. doi: 10.1111/j.1600-0854.2007.00688.x
Visualizing and clustering high throughput sub-cellular localization imaging
Hamilton, Nicholas. A. and Teasdale, Rohan D. (2008). Visualizing and clustering high throughput sub-cellular localization imaging. BMC Bioinformatics, 9 (Article # 81) 81, 1-12. doi: 10.1186/1471-2105-9-81
Towards defining the nuclear proteome
Fink, J. Lynn, Karunaratne, Seetha, Mittal, Amit, Gardiner, Donald M., Hamilton, Nicholas, Mahony, Donna, Kai, Chikatoshi, Suzuki, Harukazu, Hayashizaki, Yosihide and Teasdale, Rohan D. (2008). Towards defining the nuclear proteome. Genome Biology, 9 (1) R15, 1-15. doi: 10.1186/gb-2008-9-1-r15
Guipponi, Michel, Toh, Min-Yen, Tan, Justin, Park, Daeho, Hanson, Kelly, Ballana, Ester, Kwong, David, Cannon, Ping Z. F., Wu, Qingyu, Gout, Alex, Delorenzi, Mauro, Speed, Terence P., Smith, Richard J. H., Dahl, Henrik H., Petersen, Michael, Teasdale, Rohan D., Estivill, Xavier, Park, Woo Jin and Scott, Hamish S. (2008). An integrated genetic and functional analysis of the role of type II transmembrane serine proteases (TMPRSSs) in hearing loss. Human Mutation, 29 (1), 130-141. doi: 10.1002/humu.20617
LOCATE: A mammalian protein subcellular localization database
Sprenger, J., Fink, L., Karunaratne, S., Hanson, K., Hamilton, N. A. and Teasdale, R. D. (2008). LOCATE: A mammalian protein subcellular localization database. Nucleic Acids Research, 36 (Database issue), D230-D233. doi: 10.1093/nar/gkm950
Lieu, Zi Zhao, Derby, Merran C., Teasdale, Rohan D., Hart, Charles, Gunn, Priscilla and Gleeson, Paul A. (2007). The Golgin GCC88 is required for efficient retrograde Transport of Cargo from the early Endosomes to the Trans-Golgi Network. Molecular Biology of the Cell, 18 (12), 4979-4991. doi: 10.1091/mbc.E07-06-0622
EGF induces macropinocytosis and SNX1-modulated recycling of E-cadherin
Bryant, D. M., Kerr, M. C., Hammond, L. A., Joseph, S. R., Mostov, K. E., Teasdale, R. D. and Stow, J. L. (2007). EGF induces macropinocytosis and SNX1-modulated recycling of E-cadherin. Journal of Cell Science, 120 (10), 1818-1828. doi: 10.1242/jcs.000653
Fast automated cell phenotype image classification
Hamilton, N. A., Pantelic, R. S., Hanson, K. and Teasdale, R. D. (2007). Fast automated cell phenotype image classification. BMC Bioinformatics, 8 (110) 110, 1-8. doi: 10.1186/1471-2105-8-110
Identifying novel peroxisomal proteins
Hawkins, J., Mahony, D., Maetschke, S., Wakabayashi, M., Teasdale, R. D. and Boden, M. (2007). Identifying novel peroxisomal proteins. Proteins: Structure Function and Bioinformatics, 69 (3), 606-616. doi: 10.1002/prot.21420
Visualisation of macropinosome maturation by the recruitment of sorting nexins
Kerr, Markus C., Lindsay, Margaret R., Luetterforst, Robert, Hamilton, Nicholas, Simpson, Fiona, Parton, Robert G., Gleeson, Paul A. and Teasdale, Rohan D. (2006). Visualisation of macropinosome maturation by the recruitment of sorting nexins. Journal Of Cell Science, 119 (19), 3967-3980. doi: 10.1242/jcs.03167
Definition and spatial annotation of the dynamic secretome during early kidney development
Martinez, Gemma, Georgas, Kylie, Challen, Grant A., Rumballe, Bree, Davis, Melissa J., Taylor, Darrin, Teasdale, Rohan D., Grimmond, Sean M. and Little, Melissa H. (2006). Definition and spatial annotation of the dynamic secretome during early kidney development. Developmental Dynamics, 235 (6), 1709-1719. doi: 10.1002/dvdy.20740
Davis, Melissa J., Hanson, Kelly A., Clark, Francis, Fink, J. Lynn, Zhang, Fasheng, Kasukawa, Takeya, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide and Teasdale, Rohan D. (2006). Differential use of signal peptides and membrane domains is a common occurrence in the protein output of transcriptional units. Plos Genetics, 2 (4) e46, 554-563. doi: 10.1371/journal.pgen.0020046
Transcript annotation in FANTOM3: Mouse gene catalog based on physical cDNAs
Maeda, Norihiro, Kasukawa,Takeya, Frith, Martin, Aturaliya, Rajith N., Forrest, Alistair R. R., Ravasi,Timothy, Teasdale, Rohan D., Wells, Christine A., Hume,David A. and Hayashizaki,Yoshihide (2006). Transcript annotation in FANTOM3: Mouse gene catalog based on physical cDNAs. PLoS Genetics, 2 (4) e62, 498-503. doi: 10.1371/journal.pgen.0020062
PhosphoregDB: The tissue and sub-cellular distribution of mammalian protein kinases and phosphatases
Forrest, Alistair R. R., Taylor, Darrin F., Fink, J. Lynn, Gongora, M. Milena, Flegg, Cameron, Teasdale, Rohan D., Suzuki, Harukazu, Kanamori, Mutsumi, Kai, Chikatoshi, Hayashizaki, Yoshihide and Grimmond, Sean M. (2006). PhosphoregDB: The tissue and sub-cellular distribution of mammalian protein kinases and phosphatases. BMC Bioinformatics, 7 (82) 82, 1-11. doi: 10.1186/1471-2105-7-82
Differential gene expression in the developing mouse ureter
Mitchell, E. K. L., Taylor, D. F., Woods, K., Davis, M. J., Nelson, A. L., Teasdale, R. D., Grimmond, S. M., Little, M. H., Bertram, J. F. and Caruana, G. (2006). Differential gene expression in the developing mouse ureter. Gene Expression Patterns, 6 (5), 519-538. doi: 10.1016/j.modgep.2005.10.008
Identification and analysis of novel genes expressed in the mouse embryonic facial primordia
Bennetts, Jennifer S., Fowles, Lindsay F., Butterfield, Natalie C., Berkman, Jennifer L., Teasdale, Rohan D., Simpson, Fiona and Wicking, Carol (2006). Identification and analysis of novel genes expressed in the mouse embryonic facial primordia. Frontiers In Bioscience, 11 (SUPPL. 2), 2631-2646. doi: 10.2741/1997
LOCATE: a mouse protein subcellular localization database
Fink, J. Lynn, Aturaliya, Rajith N., Davis, Melissa J., Zhang, Fasheng, Hanson, Kelly, Teasdale, Melvena S., Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide and Teasdale, Rohan D. (2006). LOCATE: a mouse protein subcellular localization database. Nucleic Acids Research, 34 (Supp. 1), D213-D217. doi: 10.1093/nar/gkj069
MemO: A Consensus Approach to the Annotation of a Protein's Membrane Organization
Davis, Melissa J., Zhang, Fasheng, Yuan, Zheng and Teasdale, Rohan D. (2006). MemO: A Consensus Approach to the Annotation of a Protein's Membrane Organization. In Silico Biology, 6 (5), 387-399.
Predicting the solvent accessibility of transmembrane residues from protein sequence
Yuan, Z., Zhang, F. S., Davis, M. J., Boden, M. and Teasdale, R. D. (2006). Predicting the solvent accessibility of transmembrane residues from protein sequence. Journal of Proteome Research, 5 (5), 1063-1070. doi: 10.1021/pr050397b
Spatial gene expression in the T-stage mouse metanephros
Caruana, Georgina, Cullen-McEwen, Luise, Nelson, Amy L., Kostoulias, Xenia, Woods, Kyra, Gardiner, Brooke, Davis, Melissa J., Taylor, Darrin F., Teasdale, Rohan D., Grimmond, Sean M., Little, Melissa H. and Bertram, John F. (2006). Spatial gene expression in the T-stage mouse metanephros. Gene Expression Patterns, 6 (8), 807-825. doi: 10.1016/j.modgep.2006.02.001
Subcellular localization of mammalian type II membrane proteins
Aturaliya,Rajith N., Fink, J. Lynn, Davis, Melissa J., Hanson, Kelly A., Miranda,Kevin C., Forrest,Alistair R. R., Grimmond, Sean M., Suzuki,Harukazu, Kanamori,Mutsumi, Kai,Chikatoshi, Kawai,Jun, Carninci,Piero, Hayashizaki,Yoshihide and Teasdale,Rohan D. (2006). Subcellular localization of mammalian type II membrane proteins. Traffic, 7 (5), 613-625. doi: 10.1111/j.1600-0854.2006.00407.x
A Novel Mammalian Retromer Component, Vps26B
Kerr, Markus C., Bennetts, Jennifer S., Simpson, Fiona, Thomas, Elaine C., Flegg, Cameron, Gleeson, Paul A., Wicking, Carol and Teasdale, Rohan D. (2005). A Novel Mammalian Retromer Component, Vps26B. Traffic, 6 (11), 991-1001. doi: 10.1111/j.1600-0854.2005.00328.x
The transcriptional landscape of the mammalian genome
The FANTOM Consortium, Gough, J., Frith, M. C., Ravasi, T., Wells, C., Forrest, A. R. R., Davis, M. J., Aturaliya, R. N., Bailey, T. L., Crowe, M. L., Faulkner, G., Pang, K. C., Teasdale, R. D., Grimmond, S. M., Mattick, J. S., Hume, D. A. and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Core Team) (2005). The transcriptional landscape of the mammalian genome. Science, 309 (5740), 1559-1563. doi: 10.1126/science.1112014
A novel hook-related protein family and the characterization of Hook-related protein 1
Simpson, Fiona, Martin, Sally, Evans, Timothy M., Kerr, Markus, James, David E., Parton, Robert G., Teasdale, Rohan D. and Wicking, Carol (2005). A novel hook-related protein family and the characterization of Hook-related protein 1. Traffic, 6 (6), 442-458. doi: 10.1111/j.1600-0854.2005.00289.x
In vivo analysis of growth hormone receptor signaling domains and their associated transcripts
Rowland, Jennifer E., Lichanska, Agnieszka M., Kerr, Linda M., White, Mary, d'Aniello, Elisabetta M., Maher, Sheryl L., Brown, Richard, Teasdale, Rohan D., Noakes, Peter G. and Waters, Michael J. (2005). In vivo analysis of growth hormone receptor signaling domains and their associated transcripts. Molecular and Cellular Biology, 25 (5), 2072-2072. doi: 10.1128/MCB.25.5.2072.2005
In vivo analysis of growth hormone receptor signaling domains and their associated transcripts
Rowland, Jennifer E., Lichanska, Agnieszka M., Kerr, Linda M., White, Mary, d'Aniello, Elisabetta M., Maher, Sheryl L., Brown, Richard, Teasdale, Rohan D., Noakes, Peter G. and Waters, Michael J. (2005). In vivo analysis of growth hormone receptor signaling domains and their associated transcripts. Molecular And Cellular Biology, 25 (5), 66-77. doi: 10.1128/MCB.25.1.66-77.2005
Wang, B., Wylie, F. G., Teasdale, R. D. and Stow, J. L. (2005). Polarized trafficking of E-cadherin is regulated by Rac1 and Cdc42 in Madin-Darby canine kidney cells. American Journal of Physiology-cell Physiology, 288 (6), C1411-C1419. doi: 10.1152/ajpcell.00533.2004
Prediction of protein B-factor profiles
Yuan, Z., Bailey, T. L. and Teasdale, R. D. (2005). Prediction of protein B-factor profiles. Proteins-structure Function And Bioinformatics, 58 (4), 905-912. doi: 10.1002/prot.20375
Identifying the molecular phenotype of renal progenitor cells
Challen, G. A., Martinez, G., Davis, M. J., Taylor, D. F., Crowe, M., Teasdale, R. D., Grimmond, S. M. and Little, M. H. (2004). Identifying the molecular phenotype of renal progenitor cells. Journal of The American Society of Nephrology, 15 (9), 2344-2357. doi: 10.1097/01.ASN.0000136779.17837.8F
Expression of the tudor-related gene Tdrd5 during development of the male germline in mice
Smith, J. M., Bowles, J., Wilson, M., Teasdale, R. D. and Koopman, P. (2004). Expression of the tudor-related gene Tdrd5 during development of the male germline in mice. Gene Expression Patterns, 4 (6), 701-705. doi: 10.1016/j.modgep.2004.04.002
Identification of a Golgi-localised GRIP domain protein from Arabidopsis thaliana
Gilson, Paul R., Vergara, Claudia E., Kjer-Nielsen, Lars, Teasdale, Rohan D., Bacic, Antony and Gleeson, Paul A. (2004). Identification of a Golgi-localised GRIP domain protein from Arabidopsis thaliana. Planta, 219 (6), 1050-1056. doi: 10.1007/s00425-004-1311-9
SVMtm: Support vector machines to predict transmembrane segments
Yuan, Z., Mattick, J. S. and Teasdale, R. D. (2004). SVMtm: Support vector machines to predict transmembrane segments. Journal of Computational Chemistry, 25 (5), 632-636. doi: 10.1002/jcc.10411
Merino-Trigo, A., Kerr, M. C., Houghton, F., Lindberg, A., Mitchell, C., Teasdale, R. D. and Gleeson, P. A. (2004). Sorting nexin 5 is localized to a subdomain of the early endosomes and is recruited to the plasma imembrane following EGF stimulation. Journal of Cell Science, 117 (26), 6413-6424. doi: 10.1242/jcs.01561
Intracellular sorting and transport of proteins
van Vliet, Catherine, Thomas, Elaine C., Merino-Trigo, Ana, Teasdale, Rohan D. and Gleeson, Paul A. (2003). Intracellular sorting and transport of proteins. Progress in Biophysics and Molecular Biology, 83 (1), 1-45. doi: 10.1016/S0079-6107(03)00019-1
Analysis of the mouse transcriptome for genes involved in the function of the nervous system
Gustincich, Stefano, Batalov, Serge, Beisel, Kirk W., Bona, Hidemasa, Carninci, Piero, Fletcher, Colin F., Grimmond, Sean, Hirokawa, Nobutaka, Jarvis, Erich D., Jegla, Tim, Kawasawa, Yuka, LeMieux, Julianna, Miki, Harukata, Raviola, Elio, Teasdale, Rohan D., Tominaga, Naoko, Yagi, Ken, Zimmer, Andreas, RIKEN GER Group, GSL Members, Hayashizaki, Yoshihide and Okazaki, Yasushi (2003). Analysis of the mouse transcriptome for genes involved in the function of the nervous system. Genome Research, 13 (6B), 1395-1401. doi: 10.1101/gr.1135303
Computational differentiation of N-terminal signal peptides and transmembrane helices
Yuan, Z., Davis, M. J., Zhang, F. S. and Teasdale, R. D. (2003). Computational differentiation of N-terminal signal peptides and transmembrane helices. Biochemical And Biophysical Research Communications, 312 (4), 1278-1283. doi: 10.1016/j.bbrc.2003.11.069
Miranda, K. C., Joseph, S. R., Yap, A. S., Teasdale, R. D. and Stow, J. L. (2003). Contextual binding of p120ctn to E-cadherin at the basolateral plasma membrane in polarized epithelia. Journal of Biological Chemistry, 278 (44), 43480-43488. doi: 10.1074/jbc.M305525200
Genomic screen for genes involved in mammalian craniofacial development
Fowles, L. F., Bennetts, J. S., Berkman, J. L., Williams, E., Koopman, P., Teasdale, R. D. and Wicking, C. (2003). Genomic screen for genes involved in mammalian craniofacial development. Genesis, 35 (2), 73-87. doi: 10.1002/gene.10165
Identification and analysis of chromodomain-containing proteins encoded in the mouse transcriptome
Tajul Arifin, K., Teasdale, R. D., Ravasi, T., Hume, D. A., RIKEN GER Group,, GSL Members, and Mattick, J. S. (2003). Identification and analysis of chromodomain-containing proteins encoded in the mouse transcriptome. Genome Reaserch, 13 (6B), 1416-1429. doi: 10.1101/gr.1015703
Kanapin, A., Batalov, S., Davis, M., Gough, J., Grimmond, S. M., Kawaji, H., Magrane, M., Matsuda, H., Schonbach, C., Teasdale, R. D., RIKEN GER Group,, GSL Members, and Yuan, Z. (2003). Mouse proteome analysis. Genome Research, 13 (6B), 1335-1344. doi: 10.1101/gr.978703
Grimmond, Sean M., Miranda, Kevin C., Yuan, Zheng, Davis, Melissa J., Hume, David A., Yagi, Ken, Tominaga, Naoko, Bono, Hidemasa, Hayashizaki, Yoshihide, Okazaki, Yasushi, RIKEN GER Group,, GSL Members, and Teasdale, Rohan D. (2003). The mouse secretome: functional classification of the proteins secreted into the extracellular environment. Genome Research, 13 (6B), 1350-1359. doi: 10.1101/gr.983703
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
Teasdale, R. D., Hume, D. A., Yuan, Zheng and The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I & II Team (2002). Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature, 420 (6915), 563-573. doi: 10.1038/nature01266
Secretory pathway of trypanosomatid parasites
McConville, Malcolm J., Mullin, Kylie A., Ilgoutz, Steven C. and Teasdale, Rohan D. (2002). Secretory pathway of trypanosomatid parasites. Microbiology and Molecular Biology Reviews, 66 (1), 122-154. doi: 10.1128/MMBR.66.1.122-154.2002
Conserved modularity and potential for alternate splicing in mouse and human Slit genes
Little, Melissa, Rumballe, Bree, Georgas, Kylie, Yamada, Toshiya and Teasdale, Rohan D. (2002). Conserved modularity and potential for alternate splicing in mouse and human Slit genes. International Journal of Developmental Biology, 46 (4), 385-391.
Genes induced by growth hormone in a model of adipogenic differentiation
Shang, C. A., Thompson, B. J. L., Teasdale, R., Brown, R. J. and Waters, M. J. (2002). Genes induced by growth hormone in a model of adipogenic differentiation. Molecular and Cellular Endocrinology, 189 (1-2), 213-219. doi: 10.1016/S0303-7207(01)00590-1
Prediction of Golgi Type II membrane proteins based on their transmembrane domains
Yuan, Zheng and Teasdale, Rohan D. (2002). Prediction of Golgi Type II membrane proteins based on their transmembrane domains. Bioinformatics, 18 (8), 1109-1115. doi: 10.1093/bioinformatics/18.8.1109
Targeting of the GRIP domain to the trans-Golgi network is conserved from protists to animals
McConville, M. J., Ilgoutz, S. C., Teasdale, R. D., Foth, B. J., Matthews, A., Mullin, K. A. and Gleeson, P A. (2002). Targeting of the GRIP domain to the trans-Golgi network is conserved from protists to animals. European Journal of Cell Biology, 81 (9), 485-495. doi: 10.1078/0171-9335-00268
Cozier, G. E., Carlton, J., McGregor, A. H., Gleeson, P. A., Teasdale, B. D., Mellor, H. and Cullen, P. J. (2002). The Phox Homology (PX) domain-dependent, 3-phosphoinositide-mediated association of sorting nexin-1 with an early sorting endosomal compartment is required for its ability to regulate epidermal growth factor receptor degradation. Journal of Biological Chemistry, 277 (50), 48730-48736. doi: 10.1074/jbc.M206986200
Schepers, GE, Teasdale, RD and Koopman, P (2002). Twenty pairs of Sox: Extent, homology, and nomenclature of the mouse and human sox transcription factor gene families. Developmental Cell, 3 (2), 167-170. doi: 10.1016/S1534-5807(02)00223-X
A large family of endosome-localized proteins related to sorting nexin 1
Teasdale, R. D., Loci, D., Houghton, F., Karlsson, L. and Gleeson, P. A. (2001). A large family of endosome-localized proteins related to sorting nexin 1. Biochemical Journal, 358 (1), 7-16. doi: 10.1042/0264-6021:3580007
Miranda, Kevin C., Khromykh, Tatiana, Christy, Perpetina, Le, Tam Luan, Gottardi, Cara J., Yap, Alpha S., Stow, Jennifer L. and Teasdale, Rohan D. (2001). A dileucine motif targets E-cadherin to the basolateral cell surface in Madin-Darby canine kidney and LLC-PK1 epithelial cells. Journal of Biological Chemistry, 276 (25), 22565-22572. doi: 10.1074/jbc.M101907200
Human pigmentation genes: identification, structure and consequences of polymorphic variation
Sturm, R. A., Teasdale, R. D. and Box, N. F. (2001). Human pigmentation genes: identification, structure and consequences of polymorphic variation. Gene, 277 (1-2), 49-62. doi: 10.1016/S0378-1119(01)00694-1
McBride, HM, Rybin, V, Murphy, C, Giner, A, Teasdale, R and Zerial, M (1999). Oligomeric complexes link Rab5 effectors with NSF and drive membrane fusion via interactions between EEA1 and syntaxin 13. Cell, 98 (3), 377-386. doi: 10.1016/S0092-8674(00)81966-2
A novel Golgi-localisation domain shared by a class of coiled-coil peripheral membrane proteins
Kjer-Nielsen, L, Teasdale, RD, van Vliet, C and Gleeson, PA (1999). A novel Golgi-localisation domain shared by a class of coiled-coil peripheral membrane proteins. Current Biology, 9 (7), 385-388. doi: 10.1016/S0960-9822(99)80168-7
Teasdale, RD and Jackson, MR (1996). Signal-mediated sorting of membrane proteins between the endoplasmic reticulum and the Golgi apparatus. Annual Review of Cell and Developmental Biology, 12 (1), 27-54. doi: 10.1146/annurev.cellbio.12.1.27
Teasdale, RD, Matheson, F and Gleeson, PA (1994). Posttranslational Modifications Distinguish Cell-Surface From Golgi-Retained Beta-1,4 Galactosyltransferase Molecules - Golgi Localization Involves Active Retention. Glycobiology, 4 (6), 917-928. doi: 10.1093/glycob/4.6.917
Targeting of Proteins to the Golgi-Apparatus
Gleeson, PA, Teasdale, RD and Burke, J (1994). Targeting of Proteins to the Golgi-Apparatus. Glycoconjugate Journal, 11 (5), 381-394. doi: 10.1007/BF00731273
The signal for Golgi retention of bovine β1,4-galactosyltransferase is in the transmembrane domain
Teasdale, Rohan D., Dagostaro, Giacomo and Gleeson, Paul A. (1992). The signal for Golgi retention of bovine β1,4-galactosyltransferase is in the transmembrane domain. Journal of Biological Chemistry, 267 (6), 4084-4096.
Structural basis for the hijacking of endosomal sorting nexin proteins by Chlamydia trachomatis
Paul, B., Kim, H. S., Kerr, M. C., Huston, W. M., Teasdale, R. D. and Collins, B. M. (2017). Structural basis for the hijacking of endosomal sorting nexin proteins by Chlamydia trachomatis. Annual Joint Meeting of the American Society for Cell Biology and the European Molecular Biology Organization (ASCB/EMBO), Philadelphia, PA United States, 2-6 December 2017. Bethesda, MD United States: American Society for Cell Biology.
Parkinson-associated VPS35 mutations alter retromer cellular functions
Teasdale, R., Follett, J., Bugarcic, A., Yang, Z. and Collins, B. (2015). Parkinson-associated VPS35 mutations alter retromer cellular functions. 25th Biennial Meeting of the International Society for Neurochemistry Jointly with the 13th Meeting of the Asian Pacific Society for Neurochemistry in Conjunction with the 35th Meeting of the Australasian Neuroscience Society, Cairns, QLD Australia Conference, 23-27 August 2015. Chichester, West Sussex, United Kingdom: Wiley-Blackwell Publishing. doi: 10.1111/jnc.13185
Parkinson's Disease Causing Mutations Alters Retromer's Function
Follett, J., Norwood, S., Hamilton, N., Collins, B., Bugarcic, A. and Teasdale, R. D. (2014). Parkinson's Disease Causing Mutations Alters Retromer's Function. ASCB/IFCB Meeting, Philadelphia, PA United States, 06 - 10 December 2014. Bethesda, MD United States: American Society for Cell Biology.
PX family proteins at the interface between intracellular trafficking and signalling
Ghai, R., Mobli, M., Norwood, S. J., Bugarcic, A., Teasdale, R. D., King, G. F. and Collins, B. M. (2012). PX family proteins at the interface between intracellular trafficking and signalling. 22nd IUBMB Congress/37th FEBS Congress, Seville, Spain, 4-9 September 2012. Chichester, West Sussex, United Kingdom: Wiley-Blackwell. doi: 10.1111/j.1742-4658.2010.08705.x
Linear models for endocytic transformations from live cell imaging
Belward, John A., Burrage, Kevin, Teasdale, Rohan D. and Hamilton, Nicholas A. (2011). Linear models for endocytic transformations from live cell imaging. CTAC2010 : 15th Biennial Computational Techniques and Applications Conference, Univeristy of New South Wales, Sydney, Australia, 28 November - 1 December 2010. Cambridge, United Kingdom: Cambridge University Press. doi: 10.0000/anziamj.v52i0.3801
Automated subcellar phenotype classification : An introduction and recent results
Hamilton, A, Pantelic, S, Hanson,, Fink, L, Karunaratne, M and Teasdale, R D (2006). Automated subcellar phenotype classification : An introduction and recent results. 2006 Workshop on Intelligent Systems for Bioinformatics (WISB 2006), Hobart, Australia, 4/12/2006. Sydney, Australia: Australian Computer Society.
Evaluation and comparison of mammalian subcellular localization prediction methods
Sprenger, Josefine, Fink, J. Lynn and Teasdale, Rohan D. (2006). Evaluation and comparison of mammalian subcellular localization prediction methods. International Conference in Bioinformatics- InCoB2006, New Delhi, India, 18-20 December, 2006. London: BioMed Central Ltd. doi: 10.1186/1471-2105-7-S5-S3
Dppa3 is a marker of pluripotency and has a human homologue that is expressed in germ cell tumours
Bowles, J., Teasdale, R. D., James, K. M. and Koopman, P. A. (2003). Dppa3 is a marker of pluripotency and has a human homologue that is expressed in germ cell tumours. Vertebrate Sex Determination, Kona, Hawaii, 24-28 March, 2003. Basil, Switzerland: Karger. doi: 10.1159/000074346
The functional architecture of a unique family of lipid droplet proteins
(2023–2026) ARC Discovery Projects
Organising Intracellular Compartments by Formation of Transport Carriers
(2021–2023) ARC Discovery Projects
(2018–2021) University of Western Australia
ACRF Cancer Ultrastructure and Function Facility
(2017–2024) Australian Cancer Research Foundation
(2017–2019) NHMRC Project Grant
Defining the membrane protein cargo transported by Retromer
(2016–2020) ARC Discovery Projects
Sorting out the synapse: the role of intracellular trafficking in NMDA receptor homeostasis
(2016–2018) NHMRC Project Grant
Instrumentation for the analysis of cellular and metabolic phenotypes
(2016) UQ Major Equipment and Infrastructure
Formation of the Chlamydial Inclusion Requires Host Trafficking Pathways
(2015–2017) ARC Discovery Projects
Femtosecond laser imaging system for multi-photon microscopy
(2015) UQ Major Equipment and Infrastructure
Murine behavioural phenotyping facility
(2015) UQ Major Equipment and Infrastructure
Endosomal sorting of amyloid precursor protein in Alzheimer's disease
(2014–2017) NHMRC Project Grant
Molecular Dissection of Host-Pathogen Interactions
(2014–2015) Go8 Australia - Germany Joint Research Co-operation Scheme
(2014) UQ Major Equipment and Infrastructure
NHMRC Research Fellowship: Endosomal Dynamics and Pathogen Invasion
(2013–2017) NHMRC Research Fellowship
(2013–2016) NHMRC Project Grant
Retromer Directs Membrane Protein Trafficking within the Endosome
(2012–2014) ARC Discovery Projects
Endosomal protein sorting and APP processing in Alzheimer's disease
(2012–2013) NHMRC Project Grant
Spinning Disk Confocal Microscopy system - Rapid live cell imaging of dynamic biological processes
(2012) UQ Major Equipment and Infrastructure
(2011–2015) Monash University
(2011–2012) UQ Major Equipment and Infrastructure
Real time cell analysis for biological and drug discovery applications
(2011) UQ Major Equipment and Infrastructure
Australian Phenomics Network (Super Science Project administered by ANU)
(2010–2014) Australian National University
Membrane fusion in macrophage function.
(2010–2013) NHMRC Project Grant
Infrared imaging system for quantitative protein analysis
(2010) UQ Major Equipment and Infrastructure
The ACRF Cancer Biology Imaging Facility
(2009–2016) Australian Cancer Research Foundation
Modulation of endosomes for pathogen invasion
(2009–2011) NHMRC Project Grant
(2009–2011) University of Melbourne
An integrated high-performance computational platform powering systems biology investigation
(2009–2010) ARC Linkage Infrastructure, Equipment and Facilities
Automated microplate management platform
(2009) UQ Major Equipment and Infrastructure
(2008–2012) NHMRC Research Fellowship
Retromer based endosome trafficking
(2008–2010) NHMRC Project Grant
(2007–2009) ARC Discovery Projects
The nuclear growth hormone receptor- its actions and mechanism of nuclear translocation
(2007–2009) NHMRC Project Grant
Polarized trafficking of E-cadherin in epithelial cells
(2006–2008) NHMRC Project Grant
Retromer and its Role in Cell Motility
(2006) UQ External Support Enabling Grant
Dynamic Imaging Facility for Cancer Biology
(2004–2011) Australian Cancer Research Foundation
(2004–2008) Australian Stem Cell Centre
(2004–2008) NHMRC Career Development Award
(2004–2006) ARC Discovery Projects
Sorting nexins and their role in endosomal trafficking
(2004–2006) University of Melbourne
ARC Centre of Excellence in Bioinformatics
(2003–2010) ARC Centres of Excellence
(2003–2005) NHMRC Project Grant
Trafficking Of E-Cadherin In Epithelial Cells
(2003–2005) NHMRC Project Grant
(2003–2004) UQ Foundation Research Excellence Awards - DVC(R) Funding
Alternative Splicing in the Mouse Transcriptome
(2003) ARC Discovery Projects
Computational Annotation of the Subcellular Localisation of Novel Proteins in Mammalian Cells
(2003) UQ Early Career Researcher
(2002–2006) United States National Institutes of Health
Genetic programs induced by growth hormone
(2002–2004) NHMRC Project Grant
Annotation of the subcellular localisation within the mammalian secretory pathway
(2002) University of Queensland Research Development Grants Scheme
(2002) University of Queensland Research Development Grants Scheme
(2001) University of Queensland Small Grants Scheme
(2000–2001) UQ New Staff Research Start-Up Fund
Gene expression during developmental change in plantation trees
(1993) ForBio Pty Limited
How does retrograde protein trafficking dysfunction cause Parkinson's Disease?
Master Philosophy — Principal Advisor
Other advisors:
Deciphering the endosomal machinery for GLUT4 trafficking and its role in diabetes
Doctor Philosophy — Principal Advisor
Other advisors:
Defining the molecular action of retromer in retrograde trafficking pathways
(2019) Doctor Philosophy — Principal Advisor
Other advisors:
(2016) Doctor Philosophy — Principal Advisor
Other advisors:
The Role of Retromer in Parkinson's Disease
(2016) Doctor Philosophy — Principal Advisor
The Role of Sorting Nexins in Macropinocytosis and Salmonella Invasion
(2015) Doctor Philosophy — Principal Advisor
Computational methods to define the endosomal proteome
(2010) Doctor Philosophy — Principal Advisor
Other advisors:
Investigating macropinocytosis: The role of sorting nexins in macropinosome biogenesis
(2010) Doctor Philosophy — Principal Advisor
Other advisors:
The Subcellular Localisation of Type II Membrane Proteins
(2008) Doctor Philosophy — Principal Advisor
DEFINING THE MEMBRANE ORGANISATION OF EUKARYOTIC PROTEINS
() Doctor Philosophy — Principal Advisor
REDEFINING THE RETROMER
(2006) Doctor Philosophy — Principal Advisor
Other advisors:
POST-GOLGI TRAFFICKING IN THE MAMMALIAN SECRETORY PATHWAY
(2004) Doctor Philosophy — Principal Advisor
Other advisors:
SCF-Ubiquitin ligase dependent regulation of BNIP3 and NIX mitophagy receptors
(2023) Doctor Philosophy — Associate Advisor
Other advisors:
Structural studies of sorting nexin proteins from two distinct subfamilies
(2019) Doctor Philosophy — Associate Advisor
Other advisors:
Structural basis of protein cargo transport by sorting nexins
(2015) Doctor Philosophy — Associate Advisor
Other advisors:
Transcriptional complexity and post-transcriptional regulation of long noncoding RNAs
(2012) Doctor Philosophy — Associate Advisor
(2011) Doctor Philosophy — Associate Advisor
Other advisors:
Machine architectures for biological sequence classification
(2008) Doctor Philosophy — Associate Advisor
Other advisors:
The regulators of E-cadherin trafficking in polarized epithelial cells
(2008) Doctor Philosophy — Associate Advisor
Other advisors:
THE EXOCYTIC AND ENDOCYTIC TRAFFICKING OF E-CADHERIN IN EPITHELIAL CELLS
(2007) Doctor Philosophy — Associate Advisor
Other advisors:
DYNAMIC IMAGING OF POST-GOLGI PROTEIN TRANSPORT
(2006) Doctor Philosophy — Associate Advisor
Other advisors:
FUNCTIONAL GENOMICS OF THE PROTEIN KINASES AND PHOTOPHATASES OF MOUSE
(2006) Doctor Philosophy — Associate Advisor
Other advisors:
THE IDENTIFICATION AND CHARACTERISATION OF NOVEL GENES IN DEVELOPMENT
(2006) Doctor Philosophy — Associate Advisor
Other advisors:
SHADES OF DOMAINS: BIOINFORMATIC IDENTIFICATION OF PROTEIN DOMAIN SUBTYPES AND CORRELATION WITH FUNCTIONAL SPECIFICITY
(2005) Doctor Philosophy — Associate Advisor
Other advisors:
Note for students: The possible research projects listed on this page may not be comprehensive or up to date. Always feel free to contact the staff for more information, and also with your own research ideas.
Enhancement of Retromer Function in Parkinson Disease
Retromer is responsible for coordinating protein trafficking from the endosomal compartment and its function has been directly associated with causing Parkinson’s Disease. Using cell models we have preliminary data that the enhancement of retromer function reduces the pathological changes within cells. This PhD project will examine ways to enhance the function of retromer and determine if it can prevent the progression of Parkinson Disease. This project will involve the development of cell and animal models to evaluate this hypothesis.
Define the roles of the SNX-RGS proteins in membrane tethering and lipid homeostasis in adipocytes
Sorting nexins (SNXs) are a large family of proteins that are all associated with endomembrane compartments. The four human proteins, SNX14, SNX13, SNX19 and SNX25, comprise a unique sub-family referred to as the SNX- RGS molecules. However, the precise function of these proteins is still not clear, and how they work at the molecular level is largely unknown. Within the HDR project the expression and localisation of these proteins in adipocytes will be examined to determine if these SNX-RGS molecules associated with lipid droplets that formation when adipocytes differeientiate. The requirement of these molecules will be tested in knock-out cell models in combination with structure-function mutants.