Professor Ian Yang is a Thoracic Physician and Director of Thoracic Medicine at The Prince Charles Hospital, and Head of the PCH-Northside Clinical Unit, School of Clinical Medicine, Faculty of Medicine, The University of Queensland, Brisbane, Australia.
His clinical work is in the field of thoracic medicine, and his research team is studying gene-environmental interaction in COPD, asthma, lung cancer and air pollution. He is involved in the training of higher degree students in translational research into lung diseases.
He is a Chair of the National COPD Guidelines Committee of the Lung Foundation Australia, and a member of the COPD Coordinating Committee. He is Chair of the Medical Programs and Research Advisory Committee of the Asthma Foundation Queensland NSW.
Journal Article: Biologics (mepolizumab and omalizumab) induced remission in severe asthma patients
Thomas, Dennis, McDonald, Vanessa M., Stevens, Sean, Harvey, Erin S., Baraket, Melissa, Bardin, Philip, Bowden, Jeffrey J., Bowler, Simon, Chien, Jimmy, Chung, Li Ping, Gillman, Andrew, Hew, Mark, Hodge, Sandra, James, Alan, Jenkins, Christine, Katelaris, Constance H., Katsoulotos, Gregory P., Langton, David, Lee, Joy, Marks, Guy, Peters, Matthew, Radhakrishna, Naghmeh, Reynolds, Paul N., Rimmer, Janet, Sivakumaran, Pathmanathan, Upham, John W., Wark, Peter, Yang, Ian A. and Gibson, Peter G. (2023). Biologics (mepolizumab and omalizumab) induced remission in severe asthma patients. Allergy. doi: 10.1111/all.15867
Patel, Nikita, Dahl, Katrina, O'Rourke, Rachael, Williamson, Anne, Chatfield, Mark D, Fong, Kwun M, Yang, Ian A and Marshall, Henry M (2023). Vertebral CT attenuation outperforms standard clinical fracture risk prediction tools in detecting osteoporotic disease in lung cancer screening participants. The British Journal of Radiology. doi: 10.1259/bjr.20220992
Journal Article: Telomere biology disorder presenting acutely with pulmonary fibrosis and hepatopulmonary syndrome in a young adult male
Kung, Samantha Chin‐Yun, Dixon, Olivia, Kentwell, Sarah, Vasireddy, Raja S., Rodgers, Jonathan, Ding, Yuming, Rahman, Tony, Tallis, Caroline, Yang, Ian A. and Mackintosh, John A. (2023). Telomere biology disorder presenting acutely with pulmonary fibrosis and hepatopulmonary syndrome in a young adult male. Respirology Case Reports, 11 (8) e01182. doi: 10.1002/rcr2.1182
'Max Up' Trial - Maximising uptake of lung cancer screening and smoking cessation outcomes
(2023–2026) NHMRC MRFF EMCR - Early to Mid-Career Researchers
(2023–2024) Prince Charles Hospital Foundation
(2022–2026) University of Technology Sydney
Biomarkers of lung cancer
Doctor Philosophy
(2021) Doctor Philosophy
(2021) Master Philosophy
Diagnosis and treatment of chronic obstructive pulmonary disease
Improving approaches to the early diagnosis, monitoring and management of patients with COPD
Lung ageing
Genetics and epigenetics of ageing in the lung
The lung's response to air pollution
Gene-environment interaction in the lung's response to exposure to air pollutants
COPD: the risk of cancer and the impact on cancer care
Yang, Ian A., Shaw, Janet G., Stephens, Edward K.H., Chee, Tian Mun, Duhig, Edwina E., Bowman, Rayleen V., Olive, Gerard N., Marshall, Henry M. and Fong, Kwun M. (2022). COPD: the risk of cancer and the impact on cancer care. Lung diseases and cancer. (pp. 91-104) edited by Peter M.A. Calverley, Miguel Ángel Martínez-García, Mina Gaga and Kwun M. Fong. Sheffield, United Kingdom: European Respiratory Society. doi: 10.1183/2312508x.10018721
Interstitial abnormalities from solid and haematological cancers
Mackintosh, John A., Duhig, Edwina E., Reddy, Taryn, Stephens, Edward K.H., Fong, Kwun M. and Yang, Ian A. (2022). Interstitial abnormalities from solid and haematological cancers. Lung diseases and cancer. (pp. 225-240) edited by Miguel Ángel Martínez-García, Mina Gaga, Kwun M. Fong and Peter M.A. Calverley. Sheffield, United Kingdom: European Respiratory Society. doi: 10.1183/2312508x.10020221
Olive, Gerard N., Marshall, Henry M., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2021). Overview of lung cancer. Encyclopedia of respiratory medicine. (pp. 621-633) edited by Sam M. Janes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/B978-0-08-102723-3.00031-7
Differential Diagnosis of Mediastinal Masses
Semasinghe Bandaralage, S. P., Slader, Simon, Leong, S., Yang, I. A., Bowman, R. V. and Fong, Kwun M. (2021). Differential Diagnosis of Mediastinal Masses. Encyclopedia of Respiratory Medicine, Second Edition. (pp. 729-742) Elsevier. doi: 10.1016/B978-0-08-102723-3.00033-0
Goffinet, Céline, Marshall, H., Yang, Ian A., Bowman, R. V. and Fong, Kwun M. (2021). Metastases From Lung Cancer. Encyclopedia of Respiratory Medicine, Second Edition. (pp. 785-792) Elsevier. doi: 10.1016/B978-0-08-102723-3.00049-4
Shaw, Janet G., Vaughan, Annalicia, Smith, Emma, Fong, Cai, Stevanovic, Svetlana and Yang, Ian A. (2019). Spirometry for chronic obstructive pulmonary disease due to inhalation of smoke from indoor fires used for cooking and heating. Revolutionizing tropical medicine: point‐of‐care tests, new imaging technologies and digital health. (pp. 306-326) edited by Kerry Atkinson and David Mabey. Hoboken, NJ, United States: John Wiley & Sons. doi: 10.1002/9781119282686.ch20
Molecular basis of lung carcinogenesis
Fong, Kwum M., Larsen, Jill E., Wright, Casey M., Sriram, Krishna, Davidson, Morgan, Daniels, Marissa, Sekido, Yoshitaka, Bowman, Rayleen V., Yang, Ian A. and Minna, John D. (2017). Molecular basis of lung carcinogenesis. The molecular basis of human cancer. (pp. 447-496) edited by William B. Coleman and Gregory J. Tsongalis. Totowa, NJ, United States: Humana Press. doi: 10.1007/978-1-59745-458-2_28
Holloway, John, Yang, Ian, Rosenwasser, Lanny J. and Holgate, Stephen T. (2011). Genetic aspects. World Allergy Organization (WAO) White Book on Allergy. (pp. 75-78) edited by Ruby Pawankar, Giorgio Walter Canonica, Stephen T. Holgate and Richard F. Lockey. Milwaukee, WI, U.S.A.: World Allergy Organization.
Perfusion CT applications in lung cancer
Fong, Kwun M., Bowman, Rayleen V., Yang, Ian A. and Miles, Kenneth A. (2007). Perfusion CT applications in lung cancer. Multi-Detector Computed Tomography in Oncology: CT Perfusion Imaging. (pp. 111-128) edited by Kenneth Miles, Chusilip Charnsangavej and Charles A. Cuenod. New York, United States: Informa Healthcare.
Antiobiotics in chronic obstructive pulmonary disease, bronchiectasis and cystic fibrosis
Yang, I. A., Kim, S. T. and Bell, S. C. (2005). Antiobiotics in chronic obstructive pulmonary disease, bronchiectasis and cystic fibrosis. Evidence-based Respiratory Medicine. (pp. 389-414) edited by P. Gibson. Carlton South, Australia: Blackwell Publishing Asia. doi: 10.1002/9780470987377.ch30
Biologics (mepolizumab and omalizumab) induced remission in severe asthma patients
Thomas, Dennis, McDonald, Vanessa M., Stevens, Sean, Harvey, Erin S., Baraket, Melissa, Bardin, Philip, Bowden, Jeffrey J., Bowler, Simon, Chien, Jimmy, Chung, Li Ping, Gillman, Andrew, Hew, Mark, Hodge, Sandra, James, Alan, Jenkins, Christine, Katelaris, Constance H., Katsoulotos, Gregory P., Langton, David, Lee, Joy, Marks, Guy, Peters, Matthew, Radhakrishna, Naghmeh, Reynolds, Paul N., Rimmer, Janet, Sivakumaran, Pathmanathan, Upham, John W., Wark, Peter, Yang, Ian A. and Gibson, Peter G. (2023). Biologics (mepolizumab and omalizumab) induced remission in severe asthma patients. Allergy. doi: 10.1111/all.15867
Patel, Nikita, Dahl, Katrina, O'Rourke, Rachael, Williamson, Anne, Chatfield, Mark D, Fong, Kwun M, Yang, Ian A and Marshall, Henry M (2023). Vertebral CT attenuation outperforms standard clinical fracture risk prediction tools in detecting osteoporotic disease in lung cancer screening participants. The British Journal of Radiology. doi: 10.1259/bjr.20220992
Kung, Samantha Chin‐Yun, Dixon, Olivia, Kentwell, Sarah, Vasireddy, Raja S., Rodgers, Jonathan, Ding, Yuming, Rahman, Tony, Tallis, Caroline, Yang, Ian A. and Mackintosh, John A. (2023). Telomere biology disorder presenting acutely with pulmonary fibrosis and hepatopulmonary syndrome in a young adult male. Respirology Case Reports, 11 (8) e01182. doi: 10.1002/rcr2.1182
Ngo, Linh, Lee, Xiang Wen, Elwashahy, Mohamed, Arumugam, Pooja, Yang, Ian, Denman, Russell, Haqqani, Haris and Ranasinghe, Isuru (2023). Freedom from atrial arrhythmia and other clinical outcomes at five-years and beyond after catheter ablation of atrial fibrillation: A systematic review and meta-analysis. European Heart Journal - Quality of Care and Clinical Outcomes, 9 (5), 447-458. doi: 10.1093/ehjqcco/qcad037
Odo, Daniel B., Yang, Ian A., Dey, Sagnik, Hammer, Melanie S., van Donkelaar, Aaron, Martin, Randall V., Dong, Guang-Hui, Yang, Bo-Yi, Hystad, Perry and Knibbs, Luke D. (2023). A cross-sectional analysis of ambient fine particulate matter (PM2.5) exposure and haemoglobin levels in children aged under 5 years living in 36 countries. Environmental Research, 227 115734, 1-11. doi: 10.1016/j.envres.2023.115734
Active screening for lung cancer increases smoking abstinence in Australia
Marshall, Henry M., Vemula, Mounavi, Hay, Karen, McCaul, Elizabeth, Passmore, Linda, Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2023). Active screening for lung cancer increases smoking abstinence in Australia. Asia-Pacific Journal of Clinical Oncology, 19 (3), 374-384. doi: 10.1111/ajco.13879
Wootton, Sally L, Dale, Marita T, Alison, Jennifer A, Brown, Sarah, Rutherford, Hannah, Chan, Andrew S L, Varnfield, Marlien, Yang, Ian A, Cunich, Michelle, Dennis, Sarah and McKeough, Zoe J (2023). Mobile Health Pulmonary Rehabilitation Compared to a Center-Based Program for Cost-Effectiveness and Effects on Exercise Capacity, Health Status, and Quality of Life in People with Chronic Obstructive Pulmonary Disease: A Protocol for a Randomized Controlled Trial. Physical Therapy, 103 (7) pzad044. doi: 10.1093/ptj/pzad044
Inhaled corticosteroids versus placebo for stable chronic obstructive pulmonary disease
Yang, Ian A., Ferry, Olivia R., Clarke, Melissa S., Sim, Esther Ha and Fong, Kwun M. (2023). Inhaled corticosteroids versus placebo for stable chronic obstructive pulmonary disease. The Cochrane database of systematic reviews, 3 (3) CD002991. doi: 10.1002/14651858.CD002991.pub4
Odo, Daniel B., Yang, Ian A., Dey, Sagnik, Hammer, Melanie S., van Donkelaar, Aaron, Martin, Randall V., Dong, Guang-Hui, Yang, Bo-Yi, Hystad, Perry and Knibbs, Luke D. (2023). A cross-sectional analysis of long-term exposure to ambient air pollution and cognitive development in children aged 3–4 years living in 12 low- and middle-income countries. Environmental Pollution, 318 120916, 1-11. doi: 10.1016/j.envpol.2022.120916
Lobb, Richard J., Visan, Kekoolani S., Wu, Li-Ying, Norris, Emma L., Hastie, Marcus L., Everitt, Sarah, Yang, Ian A., Bowman, Rayleen V., Siva, Shankar, Larsen, Jill E., Gorman, Jeffrey J., MacManus, Michael, Leimgruber, Antoine, Fong, Kwun M. and Möller, Andreas (2023). An epithelial-to-mesenchymal transition induced extracellular vesicle prognostic signature in non-small cell lung cancer. Communications biology, 6 (1) 68. doi: 10.1038/s42003-022-04350-4
Sneath, Emily, Tippett, Vivienne, Bowman, Rayleen V., Fong, Kwun M., Hazell, Wayne, Masel, Philip J., Bunting, Denise, Watt, Kerrianne and Yang, Ian A. (2022). The clinical journey of patients with a severe exacerbation of chronic obstructive pulmonary disease (COPD): from the ambulance to the emergency department to the hospital ward. Journal of Thoracic Disease, 14 (12), 4601-4613. doi: 10.21037/jtd-22-328
Ahmed, Salma M., Mishra, Gita D., Moss, Katrina M., Mouly, Tafzila A., Yang, Ian A. and Knibbs, Luke D. (2022). Association between residential greenspace and health-related quality of life in children aged 0–12 years. Environmental Research, 214 (Pt 1) 113759, 1-8. doi: 10.1016/j.envres.2022.113759
O'Farrell, Hannah E., Bowman, Rayleen V., Fong, Kwun M and Yang, Ian A (2022). Plasma extracellular vesicle miRNA profiles distinguish chronic obstructive pulmonary disease exacerbations and disease severity. International Journal of Chronic Obstructive Pulmonary Disease, Volume 17, 2821-2833. doi: 10.2147/copd.s379774
Dabscheck, Eli, George, Johnson, Hermann, Kelcie, McDonald, Christine F., McDonald, Vanessa M., McNamara, Renae, O’Brien, Mearon, Smith, Brian, Zwar, Nicholas A. and Yang, Ian A. (2022). COPD-X Australian guidelines for the diagnosis and management of chronic obstructive pulmonary disease: 2022 update. Medical Journal of Australia, 217 (8), 415-423. doi: 10.5694/mja2.51708
Olive, Gerard N., Yang, Ian A., Marshall, Henry, Bowman, Rayleen V. and Fong, Kwun M. (2022). More than meets the eye. European Respiratory Journal, 60 (3) 2200763, 2200763. doi: 10.1183/13993003.00763-2022
Ngo, Linh, Woodman, Richard, Denman, Russell, Walters, Tomos E, Yang, Ian A and Ranasinghe, Isuru (2022). Longitudinal risk of death, hospitalisations for atrial fibrillation and cardiovascular events following catheter ablation of atrial fibrillation: a cohort study. European Heart Journal - Quality of Care and Clinical Outcomes, 9 (2), 150-160. doi: 10.1093/ehjqcco/qcac024
Issac, Hancy, Keijzers, Gerben, Yang, Ian A., Lea, Jackie, Taylor, Melissa and Moloney, Clint (2022). Development of an electronic interdisciplinary chronic obstructive pulmonary disease (COPD) proforma (E-ICP) to improve interdisciplinary guideline adherence in the emergency department: modified Delphi study. The International Journal of Chronic Obstructive Pulmonary Disease, 17, 1089-1106. doi: 10.2147/COPD.S358254
Yang, Ian A., Jenkins, Christine R. and Salvi, Sundeep S. (2022). Chronic obstructive pulmonary disease in never-smokers: risk factors, pathogenesis, and implications for prevention and treatment. The Lancet Respiratory Medicine, 10 (5), 497-511. doi: 10.1016/S2213-2600(21)00506-3
Ahmed, Salma M., Knibbs, Luke D., Moss, Katrina M., Mouly, Tafzila A., Yang, Ian A. and Mishra, Gita D. (2022). Residential greenspace and early childhood development and academic performance: a longitudinal analysis of Australian children aged 4–12 years. Science of The Total Environment, 833 155214, 155214. doi: 10.1016/j.scitotenv.2022.155214
Odo, Daniel B., Yang, Ian A., Dey, Sagnik, Hammer, Melanie S., van Donkelaar, Aaron, Martin, Randall V., Dong, Guang-Hui, Yang, Bo-Yi, Hystad, Perry and Knibbs, Luke D. (2022). Ambient air pollution and acute respiratory infection in children aged under 5 years living in 35 developing countries. Environment International, 159 107019, 107019. doi: 10.1016/j.envint.2021.107019
Ahmed, Salma M., Mishra, Gita D., Moss, Katrina M., Yang, Ian A., Lycett, Kate and Knibbs, Luke D. (2022). Maternal and childhood ambient air pollution exposure and mental health symptoms and psychomotor development in children: an Australian population-based longitudinal study. Environment International, 158 107003, 107003. doi: 10.1016/j.envint.2021.107003
Tammemägi, Martin C, Ruparel, Mamta, Tremblay, Alain, Myers, Renelle, Mayo, John, Yee, John, Atkar-Khattra, Sukhinder, Yuan, Ren, Cressman, Sonya, English, John, Bedard, Eric, MacEachern, Paul, Burrowes, Paul, Quaife, Samantha L, Marshall, Henry, Yang, Ian, Bowman, Rayleen, Passmore, Linda, McWilliams, Annette, Brims, Fraser, Lim, Kuan Pin, Mo, Lin, Melsom, Stephen, Saffar, Bann, Teh, Mark, Sheehan, Ramon, Kuok, Yijin, Manser, Renee, Irving, Louis ... Lam, Stephen (2022). USPSTF2013 versus PLCOm2012 lung cancer screening eligibility criteria (International Lung Screening Trial): interim analysis of a prospective cohort study. The Lancet Oncology, 23 (1), 138-148. doi: 10.1016/S1470-2045(21)00590-8
McInerney-Leo, Aideen M., Chew, Hui Yi, Inglis, Po-Ling, Leo, Paul J., Joseph, Shannon R., Cooper, Caroline L., Okano, Satomi, Hassall, Tim, Anderson, Lisa, Bowman, Rayleen V., Gattas, Michael, Harris, Jessica E., Marshall, Mhairi S., Shaw, Janet G., Wheeler, Lawrie, Yang, Ian A., Brown, Matthew A., Fong, Kwun M., Simpson, Fiona and Duncan, Emma L. (2021). Germline ERBB3 mutation in familial non-small cell lung carcinoma: expanding ErbB’s role in oncogenesis. Human Molecular Genetics, 30 (24), 2393-2401. doi: 10.1093/hmg/ddab172
Behaviour change: the key to implementing evidence on COPD prevention, diagnosis and management
Yang, Ian A., McDonald, Christine F. and Francis, Jill J. (2021). Behaviour change: the key to implementing evidence on COPD prevention, diagnosis and management. Respirology, 26 (11), 1021-1023. doi: 10.1111/resp.14160
Ngo, L, Woodman, R, Walters, T, Denman, R, Yang, I and Ranasinghe, I (2021). Long-term outcomes of 265,737 patients hospitalised with atrial fibrillation and atrial flutter from 2008 to 2015. European Heart Journal, 42 (S1). doi: 10.1093/eurheartj/ehab724.0294
Referral criteria to palliative care for patients with respiratory disease: a systematic review
Philip, Jennifer, Collins, Anna, Smallwood, Natasha, Chang, Yuchieh Kathryn, Mo, Li, Yang, Ian A., Corte, Tamera, McDonald, Christine F. and Hui, David (2021). Referral criteria to palliative care for patients with respiratory disease: a systematic review. The European respiratory journal, 58 (4). doi: 10.1183/13993003.04307-2020
O'Farrell, Hannah E., Brown, Reece, Brown, Zac, Milijevic, Branka, Ristovski, Zoran D., Bowman, Rayleen V., Fong, Kwun M., Vaughan, Annalicia and Yang, Ian A. (2021). E-cigarettes induce toxicity comparable to tobacco cigarettes in airway epithelium from patients with COPD. Toxicology in Vitro, 75 105204, 105204. doi: 10.1016/j.tiv.2021.105204
Martin, Allison, Hancox, Robert J., Chang, Catherina L., Beasley, Richard, Wrobel, Jeremy, McDonald, Vanessa, Dobler, Claudia C., Yang, Ian A., Farah, Claude S., Cochrane, Belinda, Hillis, Graham S., Scowcroft, Caroline Polak, Aggarwal, Ashutosh, Di Tanna, Gian Luca, Balicki, Grace, Galgey, Shane and Jenkins, Christine (2021). Preventing adverse cardiac events (PACE) in chronic obstructive pulmonary disease (COPD): study protocol for a double-blind, placebo controlled, randomised controlled trial of bisoprolol in COPD. BMJ Open, 11 (8) e053446, e053446. doi: 10.1136/bmjopen-2021-053446
Add-on azithromycin reduces sputum cytokines in non-eosinophilic asthma: An AMAZES substudy
Shukla, Shakti D, Taylor, Steven L, Gibson, Peter G, Barker, Daniel, Upham, John W, Yang, Ian A, Reynolds, Paul N, Hodge, Sandra, James, Alan L, Rogers, Geraint B and Simpson, Jodie L (2021). Add-on azithromycin reduces sputum cytokines in non-eosinophilic asthma: An AMAZES substudy. Thorax, 76 (7), 733-736. doi: 10.1136/thoraxjnl-2020-216331
Niessen, Natalie M., Gibson, Peter G., Baines, Katherine J., Barker, Daniel, Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Marks, Guy B., Baraket, Melissa, Simpson, Jodie L. and Fricker, Michael (2021). Sputum TNF markers are increased in neutrophilic and severe asthma and are reduced by azithromycin treatment. Allergy, 76 (7) all.14768, 2090-2101. doi: 10.1111/all.14768
O’Farrell, Hannah E., Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2021). Plasma extracellular vesicle miRNAs can identify lung cancer, current smoking status, and stable COPD. International Journal of Molecular Sciences, 22 (11) 5803, 1-19. doi: 10.3390/ijms22115803
Postoperative adjuvant EGFR-TKIs for resected EGFR-mutant NSCLC-opportunities and obstacles
Parris, Brielle A., Leong, Steven, Marshall, Henry, Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2021). Postoperative adjuvant EGFR-TKIs for resected EGFR-mutant NSCLC-opportunities and obstacles. Annals of Translational Medicine, 9 (7) 586, 1-5. doi: 10.21037/atm-2020-133
Odo, Daniel Bogale, Yang, Ian A., Green, Donna and Knibbs, Luke D. (2021). Women’s empowerment and household fuel use in 31 African countries: a cross-sectional analysis of households in the Demographic and Health Survey. Environmental Research Letters, 16 (2) 025012, 1-13. doi: 10.1088/1748-9326/abdd59
Odo, Daniel B., Yang, Ian A. and Knibbs, Luke D. (2021). A Systematic Review and Appraisal of Epidemiological Studies on Household Fuel Use and Its Health Effects Using Demographic and Health Surveys. International Journal of Environmental Research and Public Health, 18 (4) 1411, 1411-30. doi: 10.3390/ijerph18041411
The cost-effectiveness of azithromycin in reducing exacerbations in uncontrolled asthma
O Neill, Ciaran, Gibson, Peter G., Heaney, Liam G., Upham, John W., Yang, Ian A., Reynolds, Paul N., Hodge, Sandra, Jenkins, Christine R., Peters, Matthew, Marks, Guy B., James, Alan L. and Simpson, Jodie L. (2021). The cost-effectiveness of azithromycin in reducing exacerbations in uncontrolled asthma. European Respiratory Journal, 57 (2) 2002436. doi: 10.1183/13993003.02436-2020
Glycopyrronium bromide for chronic obstructive pulmonary disease
Burke, Joseph P, Eastment, Jacques G, Bowman, Rayleen V, Fong, Kwun M and Yang, Ian A (2020). Glycopyrronium bromide for chronic obstructive pulmonary disease. Cochrane Database of Systematic Reviews, 2020 (12) CD010798, 1-3. doi: 10.1002/14651858.CD010798.pub2
Bowerman, Kate L., Rehman, Saima Firdous, Vaughan, Annalicia, Lachner, Nancy, Budden, Kurtis F., Kim, Richard Y., Wood, David L. A., Gellatly, Shaan L., Shukla, Shakti D., Wood, Lisa G., Yang, Ian A., Wark, Peter A., Hugenholtz, Philip and Hansbro, Philip M. (2020). Disease-associated gut microbiome and metabolome changes in patients with chronic obstructive pulmonary disease. Nature Communications, 11 (1) 5886, 1-15. doi: 10.1038/s41467-020-19701-0
The effectiveness of smartphone applications to aid smoking cessation: a meta-analysis
Barnett, Adrian, Ding, Hang, Hay, Karen E., Yang, Ian A., Bowman, Rayleen V., Fong, Kwun M. and Marshall, Henry M. (2020). The effectiveness of smartphone applications to aid smoking cessation: a meta-analysis. Clinical eHealth, 3, 69-81. doi: 10.1016/j.ceh.2020.09.001
Role of lung microbiome in innate immune response associated with chronic lung diseases
Paudel, Keshav Raj, Dharwal, Vivek, Patel, Vyoma K., Galvao, Izabela, Wadhwa, Ridhima, Malyla, Vamshikrishna, Shen, Sj Sijie, Budden, Kurtis F., Hansbro, Nicole G., Vaughan, Annalicia, Yang, Ian A., Kohonen-Corish, Maija R J, Bebawy, Mary, Dua, Kamal and Hansbro, Philip M. (2020). Role of lung microbiome in innate immune response associated with chronic lung diseases. Frontiers in Medicine, 7 554, 554. doi: 10.3389/fmed.2020.00554
The role of the microbiome and the NLRP3 inflammasome in the gut and lung
Donovan, Chantal, Liu, Gang, Shen, Sj, Marshall, Jacqueline E., Kim, Richard Y., Alamao, Charlotte A., Budden, Kurtis F., Choi, Jaesung P., Kohonen-Corish, Maija, El-Omar, Emad M., Yang, Ian A. and Hansbro, Philip M. (2020). The role of the microbiome and the NLRP3 inflammasome in the gut and lung. Journal of Leukocyte Biology, 108 (3), 925-935. doi: 10.1002/JLB.3MR0720-472RR
Use of eHealth in the management of pulmonary arterial hypertension: review of the literature
Gonzalez-Garcia, Manuel C., Fatehi, Farhad, Varnfield, Marlien, Ding, Hang, Karunanithi, Mohan, Yang, Ian, Cordina, Rachael and Feenstra, John (2020). Use of eHealth in the management of pulmonary arterial hypertension: review of the literature. BMJ Health and Care Informatics, 27 (3), e100176. doi: 10.1136/bmjhci-2020-100176
Dabscheck, Eli, McDonald, Christine F. and Yang, Ian A. (2020). Concise guidance for COPD. Respirology, 25 (11) resp.13934, 1129-1132. doi: 10.1111/resp.13934
Impact of diet and the bacterial microbiome on the mucous barrier and immune disorders
Alemao, Charlotte A., Budden, Kurtis F., Gomez, Henry M., Rehman, Saima F., Marshall, Jacqueline E., Shukla, Shakti D., Donovan, Chantal, Forster, Samuel C., Yang, Ian A., Keely, Simon, Mann, Elizabeth R., El Omar, Emad M., Belz, Gabrielle T. and Hansbro, Philip M. (2020). Impact of diet and the bacterial microbiome on the mucous barrier and immune disorders. Allergy, 76 (3) all.14548, 1-21. doi: 10.1111/all.14548
Diagnosis and treatment of early lung cancer
McLellan, Rachel, Marshall, Henry, Dent, Annette, Bowman, Rayleen V., Yang, Ian A. and Fong, Kwun M. (2020). Diagnosis and treatment of early lung cancer. Australian Journal of General Practice, 49 (8), 508-512. doi: 10.31128/AJGP-11-19-5148
Ding, Hang, Chen, Sheau Huey, Edwards, Iain, Jayasena, Rajiv, Doecke, James, Layland, Jamie, Yang, Ian and Maiorana, Andrew (2020). The effects of different telemonitoring strategies in chronic heart failure care: a systematic review and subgroup meta-analysis. Journal of Medical Internet Research, 22 (11) e20032, e20032. doi: 10.2196/20032
Management of acute COPD exacerbations in Australia: do we follow the guidelines?
Cousins, Joyce L., Wood-Baker, Richard, Wark, Peter A. B., Yang, Ian A., Gibson, Peter G., Hutchinson, Anastasia, Sajkov, Dimitar, Hiles, Sarah A., Samuel, Sameh and McDonald, Vanessa M. (2020). Management of acute COPD exacerbations in Australia: do we follow the guidelines?. Erj Open Research, 6 (2) 00270-2019. doi: 10.1183/23120541.00270-2019
Protocol and rationale for the international lung screening trial
Lim, Kuan Pin, Marshall, Henry, Tammemägi, Martin, Brims, Fraser, McWilliams, Annette, Stone, Emily, Manser, Renee, Canfell, Karen, Weber, Marianne, Connelly, Luke, Bowman, Rayleen V., Yang, Ian A., Fogarty, Paul, Mayo, John, Yee, John, Myers, Renelle, Atkar-Khattra, Sukhinder, Lam, David C. L., Rosell, Antoni, Berg, Christine D., Fong, Kwun M. and Lam, Stephen (2020). Protocol and rationale for the international lung screening trial. Annals of the American Thoracic Society, 17 (4), 503-512. doi: 10.1513/annalsats.201902-102oc
Validation of the eighth edition TNM lung cancer staging system; a brief report
Hwang, Joseph K., Page, Barbara J., Flynn, David, Passmore, Linda, McCaul, Elizabeth, Brady, Jaccalyne, Yang, Ian A., Marshall, Henry, Windsor, Morgan, Bowman, Rayleen V., Naidoo, Rishendran, Guan, Tracey, Philpot, Shoni, Blake, Michael E. and Fong, Kwun M. (2020). Validation of the eighth edition TNM lung cancer staging system; a brief report. Journal of Thoracic Oncology, 15 (4), 649-654. doi: 10.1016/j.jtho.2019.11.030
Dummer, Jack, Dobler, Claudia C., Holmes, Mark, Chambers, Daniel, Yang, Ian A., Parkin, Lianne, Smith, Sheree, Wark, Peter, Dev, Anouk, Hodge, Sandra, Dabscheck, Eli, Gooi, Julian, Samuel, Sameh, Knowles, Steven and Holland, Anne E. (2020). Diagnosis and treatment of lung disease associated with alpha one‐antitrypsin deficiency: a position statement from the Thoracic Society of Australia and New Zealand*. Respirology, 25 (3) resp.13774, 321-335. doi: 10.1111/resp.13774
‘Omics’: the new language in medicine that we all must learn
Moodley, Yuben and Yang, Ian A. (2019). ‘Omics’: the new language in medicine that we all must learn. Respirology, 25 (2) resp.13754, 137-138. doi: 10.1111/resp.13754
Clinical utility of exhaled nitric oxide fraction in the management of asthma and COPD
Turner, Steve W., Chang, Anne B. and Yang, Ian A. (2019). Clinical utility of exhaled nitric oxide fraction in the management of asthma and COPD. Breathe, 15 (4), 306-316. doi: 10.1183/20734735.0268-2019
EGFR mutations in lung cancer: not all equal in the eyes of the immune system?
Fong, Kwun M., Hughes, Brett G. M., Lwin, Zarnie and Yang, Ian A. (2019). EGFR mutations in lung cancer: not all equal in the eyes of the immune system?. Annals of Translational Medicine, 7 (S8), S326-S326. doi: 10.21037/atm.2019.09.132
The cost of screening for lung cancer in Australia
Marshall, Henry M., Finn, Nicola, Bowman, Rayleen V., Passmore, Linda H., McCaul, Elizabeth M., Yang, Ian A., Connelly, Luke and Fong, Kwun M. (2019). The cost of screening for lung cancer in Australia. Internal Medicine Journal, 49 (11) imj.14439, 1392-1399. doi: 10.1111/imj.14439
Kerstjens, Huib A. M., Upham, John W. and Yang, Ian A. (2019). Airway pharmacology: treatment options and algorithms to treat patients with chronic obstructive pulmonary disease. Journal of Thoracic Disease, 11 (S17), S2200-S2209. doi: 10.21037/jtd.2019.10.57
COPD and the gut-lung axis: the therapeutic potential of fibre
Vaughan, Annalicia, Frazer, Zoe A., Hansbro, Philip M. and Yang, Ian A. (2019). COPD and the gut-lung axis: the therapeutic potential of fibre. Journal of Thoracic Disease, 11 (S17), S2173-S2180. doi: 10.21037/jtd.2019.10.40
Chronic obstructive pulmonary disease (COPD) and lung cancer: common pathways for pathogenesis
Parris, Brielle A., O'Farrell, Hannah E., Fong, Kwun M. and Yang, Ian A. (2019). Chronic obstructive pulmonary disease (COPD) and lung cancer: common pathways for pathogenesis. Journal of Thoracic Disease, 11 (S17), S2155-S2172. doi: 10.21037/jtd.2019.10.54
Pumar, Marsus, Roll, Mark, Fung, Pamela, Rolls, Tricia A., Walsh, James R., Bowman, Rayleen, Fong, Kwun M. and Yang, Ian A. (2019). Cognitive behavioural therapy (CBT) for patients with chronic lung disease and psychological comorbidities undergoing pulmonary rehabilitation. Journal of Thoracic Disease, 11 (S17), S2238-S2253. doi: 10.21037/jtd.2019.10.23
Diagnostic approach to chronic dyspnoea in adults
Ferry, Olivia R., Huang, Yao C., Masel, Philip J., Hamilton, Michael, Fong, Kwun M., Bowman, Rayleen, McKenzie, Scott C. and Yang, Ian A. (2019). Diagnostic approach to chronic dyspnoea in adults. Journal of Thoracic Disease, 11 (S17), S2117-S2128. doi: 10.21037/jtd.2019.10.53
Efficacy of azithromycin in severe asthma from the AMAZES randomised trial
Gibson, Peter G., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Marks, Guy B., Baraket, Melissa, Powell, Heather and Simpson, Jodie L. (2019). Efficacy of azithromycin in severe asthma from the AMAZES randomised trial. ERJ Open Research, 5 (4) 00056-2019, 00056-2019. doi: 10.1183/23120541.00056-2019
Extracellular vesicles in chronic obstructive pulmonary disease (COPD)
O'Farrell, Hannah E. and Yang, Ian A. (2019). Extracellular vesicles in chronic obstructive pulmonary disease (COPD). Journal of Thoracic Disease, 11 (S17), S2141-S2154. doi: 10.21037/jtd.2019.10.16
Nutritional support in chronic obstructive pulmonary disease (COPD): an evidence update
Collins, Peter F., Yang, Ian A., Chang, Yuan-Chin and Vaughan, Annalicia (2019). Nutritional support in chronic obstructive pulmonary disease (COPD): an evidence update. Journal of Thoracic Disease, 11 (Suppl. 17), S2230-S2237. doi: 10.21037/jtd.2019.10.41
Marshall, Henry M., Vaughan, Annalicia and Yang, Ian A. (2019). Personalised multidisciplinary management for patients with chronic obstructive pulmonary disease (COPD). Journal of Thoracic Disease, 11 (S17), S2115-S2116. doi: 10.21037/jtd.2019.10.52
O'Farrell, Hannah E., Shaw, Janet G., Goh, Felicia, Bowman, Rayleen, Fong, Kwun M., Krause, Lutz and Yang, Ian A. (2019). Potential clinical utility of multiple target quantitative polymerase chain reaction (qPCR) array to detect microbial pathogens in patients with chronic obstructive pulmonary disease (COPD). Journal of Thoracic Disease, 11 (S17), S2254-+. doi: 10.21037/jtd.2019.10.39
Sneath, Emily, Bunting, Denise, Hazell, Wayne, Tippett, Vivienne and Yang, Ian A. (2019). Pre-hospital and emergency department pathways of care for exacerbations of chronic obstructive pulmonary disease (COPD). Journal of Thoracic Disease, 11 (S17), S2221-S2229. doi: 10.21037/jtd.2019.10.37
Islam, Mohammad S., Saha, Suvash C., Gemci, Tevfik, Yang, Ian A., Sauret, Emilie, Ristovski, Zoran and Gu, T. (2019). Euler-Lagrange Prediction of Diesel-Exhaust Polydisperse Particle Transport and Deposition in Lung: Anatomy and Turbulence Effects. Scientific Reports, 9 (1) 12423, 12423. doi: 10.1038/s41598-019-48753-6
Thorsson, Vésteinn, Gibbs, David L., Brown, Scott D., Wolf, Denise, Bortone, Dante S., Ou Yang, Tai-Hsien, Porta-Pardo, Eduard, Gao, Galen F., Plaisier, Christopher L., Eddy, James A., Ziv, Elad, Culhane, Aedin C., Paull, Evan O., Sivakumar, I.K. Ashok, Gentles, Andrew J., Malhotra, Raunaq, Farshidfar, Farshad, Colaprico, Antonio, Parker, Joel S., Mose, Lisle E., Vo, Nam Sy, Liu, Jianfang, Liu, Yuexin, Rader, Janet, Dhankani, Varsha, Reynolds, Sheila M., Bowlby, Reanne, Califano, Andrea, Cherniack, Andrew D. ... Vincent, Benjamin G. (2019). Erratum: The Immune Landscape of Cancer (Immunity (2018) 48(4) (812–830.e14), (S1074761318301213), (10.1016/j.immuni.2018.03.023)). Immunity, 51 (2), 411-412. doi: 10.1016/j.immuni.2019.08.004
Taylor, Steven L., Leong, Lex E. X., Mobegi, Fredrick M., Choo, Jocelyn M., Wesselingh, Steve, Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Baraket, Melissa, Marks, Guy B., Gibson, Peter G., Rogers, Geraint B. and Simpson, Jodie L. (2019). Long-term azithromycin reduces Haemophilus influenzae and increases antibiotic resistance in severe asthma. American Journal of Respiratory and Critical Care Medicine, 200 (3), 309-317. doi: 10.1164/rccm.201809-1739OC
Vaughan, Annalicia, Stevanovic, Svetlana, Banks, Andrew P. W., Zare, Ali, Rahman, Md Mostafizur, Bowman, Rayleen V., Fong, Kwun M., Ristovski, Zoran D. and Yang, Ian A. (2019). The cytotoxic, inflammatory and oxidative potential of coconut oil-substituted diesel emissions on bronchial epithelial cells at an air-liquid interface. Environmental Science and Pollution Research, 26 (27), 27783-27791. doi: 10.1007/s11356-019-05959-5
Mackintosh, John A., Marshall, Henry M., Slaughter, Richard, Reddy, Taryn, Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2019). Interstitial lung abnormalities in the Queensland Lung Cancer Screening Study: prevalence and progression over two years of surveillance: ILAs in QLCSS prevalence and progression. Internal Medicine Journal, 49 (7), 843-849. doi: 10.1111/imj.14148
Whole-genome sequencing of human malignant mesothelioma tumours and cell lines
Oey, Harald, Daniels, Marissa, Relan, Vandana, Chee, Tian Mun, Davidson, Morgan R., Yang, Ian A., Ellis, Jonathan J., Fong, Kwun M., Krause, Lutz and Bowman, Rayleen V. (2019). Whole-genome sequencing of human malignant mesothelioma tumours and cell lines. Carcinogenesis, 40 (6), 724-734. doi: 10.1093/carcin/bgz066
Vaughan, Annalicia, Stevanovic, Svetlana, Jafari, Mohammad, Bowman, Rayleen V., Fong, Kwun M., Ristovski, Zoran D. and Yang, Ian A. (2019). Primary human bronchial epithelial cell responses to diesel and biodiesel emissions at an air-liquid interface. Toxicology in Vitro, 57, 67-75. doi: 10.1016/j.tiv.2019.02.005
The effectiveness of smartphone applications to aid smoking cessation: a meta-analysis
Barnett, Adrian, Yang, Ian, Hay, Karen, Ding, Hang, Bowman, Rayleen, Fong, Kwun and Marshall, Henry (2019). The effectiveness of smartphone applications to aid smoking cessation: a meta-analysis. SSRN Electronic Journal, 1-34. doi: 10.2139/ssrn.3382411
CRISPR‐Cas9 technology: a new direction for personalized medicine in respiratory disease?
Vaughan, Annalicia and Yang, Ian A. (2019). CRISPR‐Cas9 technology: a new direction for personalized medicine in respiratory disease?. Respirology, 24 (7) resp.13570, 614-615. doi: 10.1111/resp.13570
Ding, Hang, Karunanithi, Mohan, Ireland, Derek, McCarthy, Lisa, Hakim, Rekha, Phillips, Kirsten, Pradhan, Rahul, Seah, E-Hong, Bowman, Rayleen V., Fong, Kwun, Masel, Philip and Yang, Ian A. (2019). Evaluation of an innovative mobile health programme for the self-management of chronic obstructive pulmonary disease (MH-COPD): Protocol of a randomised controlled trial. BMJ Open, 9 (4) e025381, e025381. doi: 10.1136/bmjopen-2018-025381
Clinical management practices of life-threatening asthma: an audit of practices in intensive care
Secombe, Paul, Stewart, Penny, Singh, Sunil, Campbell, Lewis, Stephens, Dianne, Tran, Khoa, White, Hayden, Sheehy, Robert, Gibson, Justine, Cooke, Robyn, Townsend, Shane, Apte, Yogesh, Winearls, James, Ferry, Olivia R., Pradhan, Rahul, Ziegenfuss, Marc, Fong, Kwun M., Yang, Ian A., McGinnity, Paul, Meyer, Jason, Walsham, James, Boots, Rob, Clement, Pierre, Bandeshe, Hiran, Gracie, Christopher, Jarret, Paul, Collins, Stephenie, Coulston, Caitlin, Ng, Melisa ... The Critical Care Asthma Investigators (2019). Clinical management practices of life-threatening asthma: an audit of practices in intensive care. Critical Care and Resuscitation, 21 (1), 53-62.
Clinical management practices of life-threatening asthma: an audit of practices in intensive care
Secombe, Paul, Stewart, Penny, Singh, Sunil, Campbell, Lewis, Stephens, Dianne, Tran, Khoa, White, Hayden, Sheehy, Robert, Gibson, Justine, Cooke, Robyn, Townsend, Shane, Apte, Yogesh, Winearls, James, Ferry, Olivia R., Pradhan, Rahul, Ziegenfuss, Marc, Fong, Kwun M., Yang, Ian A., McGinnity, Paul, Meyer, Jason, Walsham, James, Boots, Rob, Clement, Pierre, Bandeshe, Hiran, Gracie, Christopher, Jarret, Paul, Collins, Stephenie, Coulston, Caitlin, Ng, Melisa ... Trout, Melita (2019). Clinical management practices of life-threatening asthma: an audit of practices in intensive care. Critical care and resuscitation : journal of the Australasian Academy of Critical Care Medicine, 21 (1), 53-62.
Vaughan, Annalicia, Stevanovic, Svetlana, Jafari, Mohammad, Rahman, Mostafizur, Bowman, Rayleen V., Fong, Kwun M., Ristovski, Zoran and Yang, Ian A. (2019). The effect of diesel emission exposure on primary human bronchial epithelial cells from a COPD cohort: N-acetylcysteine as a potential protective intervention. Environmental Research, 170, 194-202. doi: 10.1016/j.envres.2018.12.035
A sputum 6-gene signature predicts future exacerbations of poorly controlled asthma
Fricker, Michael, Gibson, Peter G., Powell, Heather, Simpson, Jodie L., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Marks, Guy B., Baraket, Melissa and Baines, Katherine J. (2019). A sputum 6-gene signature predicts future exacerbations of poorly controlled asthma. Journal of Allergy and Clinical Immunology, 144 (1), 51-60.e11. doi: 10.1016/j.jaci.2018.12.1020
Treatable traits can be identified in a severe asthma registry and predict future exacerbations
McDonald, Vanessa M., Hiles, Sarah A., Godbout, Krystelle, Harvey, Erin S., Marks, Guy B., Hew, Mark, Peters, Matthew, Bardin, Philip G., Reynolds, Paul N., Upham, John W., Baraket, Melissa, Bhikoo, Zaheerodin, Bowden, Jeffrey, Brockway, Ben, Chung, Li Ping, Cochrane, Belinda, Foxley, Gloria, Garrett, Jeffrey, Jayaram, Lata, Jenkins, Christine, Katelaris, Constance, Katsoulotos, Gregory, Koh, Mariko S., Kritikos, Vicky, Lambert, Marina, Langton, David, Lara Rivero, Alexis, Middleton, Peter G., Nanguzgambo, Aldoph ... Gibson, Peter G. (2019). Treatable traits can be identified in a severe asthma registry and predict future exacerbations. Respirology, 24 (1), 37-47. doi: 10.1111/resp.13389
Islam, Mohammad S., Saha, Suvash C., Gemci, Tevfik, Yang, Ian A., Sauret, Emilie and Gu, Y. T. (2018). Polydisperse microparticle transport and deposition to the terminal bronchioles in a heterogeneous vasculature tree. Scientific Reports, 8 (1) 16387, 16387. doi: 10.1038/s41598-018-34804-x
How do new molecular tools apply to my clinical practice?
Yang, Ian A. and Moodley, Yuben (2018). How do new molecular tools apply to my clinical practice?. Respirology, 23 (11), 991-992. doi: 10.1111/resp.13381
Comprehensive molecular characterization of the hippo signaling pathway in cancer
Wang, Yumeng, Xu, Xiaoyan, Maglic, Dejan, Dill, Michael T., Mojumdar, Kamalika, Ng, Patrick Kwok-Shing, Jeong, Kang Jin, Tsang, Yiu Huen, Moreno, Daniela, Bhavana, Venkata Hemanjani, Peng, Xinxin, Ge, Zhongqi, Chen, Hu, Li, Jun, Chen, Zhongyuan, Zhang, Huiwen, Han, Leng, Du, Di, Creighton, Chad J., Mills, Gordon B., Camargo, Fernando, Liang, Han, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Comprehensive molecular characterization of the hippo signaling pathway in cancer. Cell Reports, 25 (5), 1304-1317.e5. doi: 10.1016/j.celrep.2018.10.001
Korkut, Anil, Zaidi, Sobia, Kanchi, Rupa S, Rao, Shuyun, Gough, Nancy R, Schultz, Andre, Li, Xubin, Lorenzi, Philip L, Berger, Ashton C, Robertson, Gordon, Kwong, Lawrence N, Datto, Mike, Roszik, Jason, Ling, Shiyun, Ravikumar, Visweswaran, Manyam, Ganiraju, Rao, Arvind, Shelley, Simon, Liu, Yuexin, Ju, Zhenlin, Hansel, Donna, de Velasco, Guillermo, Pennathur, Arjun, Andersen, Jesper B, O'Rourke, Colm J, Ohshiro, Kazufumi, Jogunoori, Wilma, Nguyen, Bao-Ngoc, Li, Shulin ... Yang, Ian (2018). A Pan-Cancer Analysis Reveals High-Frequency Genetic Alterations in Mediators of Signaling by the TGF-β Superfamily. Cell systems, 7 (4), 422-437.e7. doi: 10.1016/j.cels.2018.08.010
Subtype variation and actionability of telomere length abnormality in lung cancer
Goh, Felicia, Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2018). Subtype variation and actionability of telomere length abnormality in lung cancer. Translational Lung Cancer Research, 7 (S3), S251-S253. doi: 10.21037/tlcr.2018.09.03
Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients
Kahles, Andre, Lehmann, Kjong-Van, Toussaint, Nora C., Huser, Matthias, Stark, Stefan G., Sachsenberg, Timo, Stegle, Oliver, Kohlbacher, Oliver, Sander, Chris, Ratsch, Gunnar, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients. Cancer Cell, 34 (2), 211-224.e6. doi: 10.1016/j.ccell.2018.07.001
Erratum: Comprehensive Characterization of Cancer Driver Genes and Mutations
Bailey, Matthew H., Tokheim, Collin, Porta-Pardo, Eduard, Sengupta, Sohini, Bertrand, Denis, Weerasinghe, Amila, Colaprico, Antonio, Wendl, Michael C., Kim, Jaegil, Reardon, Brendan, Kwok-Shing Ng, Patrick, Jeong, Kang Jin, Cao, Song, Wang, Zixing, Gao, Jianjiong, Gao, Qingsong, Wang, Fang, Liu, Eric Minwei, Mularoni, Loris, Rubio-Perez, Carlota, Nagarajan, Niranjan, Cortés-Ciriano, Isidro, Zhou, Daniel Cui, Liang, Wen-Wei, Hess, Julian M., Yellapantula, Venkata D., Tamborero, David, Gonzalez-Perez, Abel, Suphavilai, Chayaporn ... Ding, Li (2018). Erratum: Comprehensive Characterization of Cancer Driver Genes and Mutations. Cell, 174 (4), 1034-1035. doi: 10.1016/j.cell.2018.07.034
Erratum: The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma
Ricketts, Christopher J., De Cubas, Aguirre A., Fan, Huihui, Smith, Christof C., Lang, Martin, Reznik, Ed, Bowlby, Reanne, Gibb, Ewan A., Akbani, Rehan, Beroukhim, Rameen, Bottaro, Donald P., Choueiri, Toni K., Gibbs, Richard A., Godwin, Andrew K., Haake, Scott, Hakimi, A. Ari, Henske, Elizabeth P., Hsieh, James J., Ho, Thai H., Kanchi, Rupa S., Krishnan, Bhavani, Kwiatkowski, David J., Lui, Wembin, Merino, Maria J., Mills, Gordon B., Myers, Jerome, Nickerson, Michael L., Reuter, Victor E., Schmidt, Laura S. ... Mariamidze, Armaz (2018). Erratum: The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma. Cell Reports, 23 (12), 3698. doi: 10.1016/j.celrep.2018.06.032
Ekanayake, Siyaguna K. D. M., Yang, Ian A., Godbolt, David B., Windsor, Morgan N., Henderson, Daniel, Kyle, Samuel, Sterling, David and Lee, Joseph C. (2018). Prostate-specific membrane antigen avidity on positron emission tomography scan in malignant pleural mesothelioma. ANZ Journal of Surgery, 89 (9), E406-E407. doi: 10.1111/ans.14694
Huang, Yao C., Ferry, Olivia R., McKenzie, Scott C., Bowman, Rayleen, Hamilton, Michael, Masel, Philip J., Fong, Kwun M. and Yang, Ian A. (2018). Diagnosis of the cause of chronic dyspnoea in primary and tertiary care: characterizing diagnostic confidence. Journal of Thoracic Disease, 10 (6), 3745-3756. doi: 10.21037/jtd.2018.05.183
Working while unwell: Workplace impairment in people with severe asthma
Hiles, S. A., Harvey, E. S., McDonald, V. M., Peters, M., Bardin, P., Reynolds, P. N., Upham, J. W., Baraket, M., Bhikoo, Z., Bowden, J., Brockway, B., Chung, L. P., Cochrane, B., Foxley, G., Garrett, J., Hew, M., Jayaram, L., Jenkins, C., Katelaris, C., Katsoulotos, G., Koh, M. S., Kritikos, V., Lambert, M., Langton, D., Rivero, A. L., Marks, G. B., Middleton, P. G., Nanguzgambo, A., Radhakrishna, N. ... Gibson, P. G. (2018). Working while unwell: Workplace impairment in people with severe asthma. Clinical and Experimental Allergy, 48 (6), 650-662. doi: 10.1111/cea.13153
The Immune Landscape of Cancer
Thorsson, Vesteinn, Gibbs, David L., Brown, Scott D., Wolf, Denise, Bortone, Dante S., Yang, Tai-Hsien Ou, Porta-Pardo, Eduard, Gao, Galen F., Plaisier, Christopher L., Eddy, James A., Ziv, Elad, Culhane, Aedin C., Paull, Evan O., Sivakumar, I. K. Ashok, Gentles, Andrew J., Malhotra, Raunaq, Farshidfar, Farshad, Colaprico, Antonio, Parker, Joel S., Mose, Lisle E., Nam Sy Vo,, Liu, Jianfang, Liu, Yuexin, Rader, Janet, Dhankani, Varsha, Reynolds, Sheila M., Bowlby, Reanne, Califano, Andrea, Cherniack, Andrew D. ... Yang, Ian (2018). The Immune Landscape of Cancer. Immunity, 48 (4), 812-830.e14. doi: 10.1016/j.immuni.2018.03.023
A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers
Berger, Ashton C., Korkut, Anil, Kanchi, Rupa S., Hegde, Apurva M., Lenoir, Walter, Liu, Wenbin, Liu, Yuexin, Fan, Huihui, Shen, Hui, Ravikumar, Visweswaran, Rao, Arvind, Schultz, Andre, Li, Xubin, Sumazin, Pavel, Williams, Cecilia, Mestdagh, Pieter, Gunaratne, Preethi H., Yau, Christina, Bowlby, Reanne, Robertson, A. Gordon, Tiezzi, Daniel G., Wang, Chen, Cherniack, Andrew D., Godwin, Andrew K., Kuderer, Nicole M., Rader, Janet S., Zuna, Rosemary E., Sood, Anil K., Lazar, Alexander J. ... Yang, Ian (2018). A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers. Cancer Cell, 33 (4), 690-705.e9. doi: 10.1016/j.ccell.2018.03.014
Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas
Liu, Yang, Sethi, Nilay S., Hinoue, Toshinori, Schneider, Barbara G., Cherniack, Andrew D., Sanchez-Vega, Francisco, Seoane, Jose A., Farshidfar, Farshad, Bowlby, Reanne, Islam, Mirazul, Kim, Jaegil, Chatila, Walid, Akbani, Rehan, Kanchi, Rupa S., Rabkin, Charles S., Willis, Joseph E., Wang, Kenneth K., McCall, Shannon J., Mishra, Lopa, Ojesina, Akinyemi I., Bullman, Susan, Pedamallu, Chandra Sekhar, Lazar, Alexander J., Sakai, Ryo, Thorsson, Vesteinn, Bass, Adam J., Laird, Peter W., The Cancer Genome Atlas Research Network and Yang, Ian (2018). Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas. Cancer Cell, 33 (4), 721-735.e8. doi: 10.1016/j.ccell.2018.03.010
Genomic and Functional Approaches to Understanding Cancer Aneuploidy
Taylor, Alison M., Shih, Juliann, Ha, Gavin, Gao, Galen F., Zhang, Xiaoyang, Berger, Ashton C., Schumacher, Steven E., Wang, Chen, Hu, Hai, Liu, Jianfang, Lazar, Alexander J., Cherniack, Andrew D., Beroukhim, Rameen, Meyerson, Matthew, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Genomic and Functional Approaches to Understanding Cancer Aneuploidy. Cancer Cell, 33 (4), 676-689.e3. doi: 10.1016/j.ccell.2018.03.007
Wang, Zehua, Yang, Bo, Zhang, Min, Guo, Weiwei, Wu, Zhiyuan, Wang, Yue, Jia, Lin, Li, Song, Xie, Wen, Yang, Da, The Cancer Genome Atlas Research Network and Yang, Ian (2018). lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer. Cancer Cell, 33 (4), 706-720.e9. doi: 10.1016/j.ccell.2018.03.006
A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples
Chen, Han, Li, Chunyan, Peng, Xinxin, Zhou, Zhicheng, Weinstein, John N., Liang, Han, The Cancer Genome Atlas Research Network and Yang, Ian (2018). A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples. Cell, 173 (2), 386-399.e12. doi: 10.1016/j.cell.2018.03.027
Liu, Jianfang, Lichtenberg, Tara, Hoadley, Katherine A., Poisson, Laila M., Lazar, Alexander J., Cherniack, Andrew D., Kovatich, Albert J., Benz, Christopher C., Levine, Douglas A., Lee, Adrian V., Omberg, Larsson, Wolf, Denise M., Shriver, Craig D., Thorsson, Vesteinn, Hu, Hai, The Cancer Genome Atlas Research Network and Yang, Ian (2018). An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics. Cell, 173 (2), 400-416.e11. doi: 10.1016/j.cell.2018.02.052
Hoadley, Katherine A., Yau, Christina, Hinoue, Toshinori, Wolf, Denise M., Lazar, Alexander J., Drill, Esther, Shen, Ronglai, Taylor, Alison M., Cherniack, Andrew D., Thorsson, Vesteinn, Akbani, Rehan, Bowlby, Reanne, Wong, Christopher K., Wiznerowicz, Maciej, Sanchez-Vega, Francisco, Robertson, A. Gordon, Schneider, Barbara G., Lawrence, Michael S., Noushmehr, Houtan, Malta, Tathiane M., Stuart, Joshua M., Benz, Christopher C., Laird, Peter W., The Cancer Genome Atlas Network and Yang, Ian (2018). Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer. Cell, 173 (2), 291-304.e6. doi: 10.1016/j.cell.2018.03.022
Comprehensive Characterization of Cancer Driver Genes and Mutations
Bailey, Matthew H., Tokheim, Collin, Porta-Pardo, Eduard, Sengupta, Sohini, Bertrand, Denis, Weerasinghe, Amila, Colaprico, Antonio, Wendl, Michael C., Kim, Jaegil, Reardon, Brendan, Ng, Patrick Kwok-Shing, Jeong, Kang Jin, Cao, Song, Wang, Zixing, Gao, Jianjiong, Gao, Qingsong, Wang, Fang, Liu, Eric Minwei, Mularoni, Loris, Rubio-Perez, Carlota, Nagarajan, Niranjan, Cortes-Ciriano, Isidro, Zhou, Daniel Cui, Liang, Wen-Wei, Hess, Julian M., Yellapantula, Venkata D., Tamborero, David, Gonzalez-Perez, Abel, Suphavilai, Chayaporn ... Yang, Ian (2018). Comprehensive Characterization of Cancer Driver Genes and Mutations. Cell, 173 (2), 371-385.e18. doi: 10.1016/j.cell.2018.02.060
Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation
Malta, Tathiane M., Sokolov, Artem, Gentles, Andrew J., Burzykowski, Tomasz, Poisson, Laila, Weinstein, John N., Kaminska, Bozena, Huelsken, Joerg, Omberg, Larsson, Gevaert, Olivier, Colaprico, Antonio, Czerwinska, Patrycja, Mazurek, Sylwia, Mishra, Lopa, Heyn, Holger, Krasnitz, Alex, Godwin, Andrew K., Lazar, Alexander J., Stuart, Joshua M., Hoadley, Katherine A., Laird, Peter W., Noushmehr, Houtan, Wiznerowicz, Maciej, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation. Cell, 173 (2), 338-354.e15. doi: 10.1016/j.cell.2018.03.034
Oncogenic Signaling Pathways in The Cancer Genome Atlas
Sanchez-Vega, Francisco, Mina, Marco, Armenia, Joshua, Chatila, Walid K., Luna, Augustin, La, Konnor C., Dimitriadoy, Sofia, Liu, David L., Kantheti, Havish S., Saghafinia, Sadegh, Chakravarty, Debyani, Daian, Foysal, Gao, Qingsong, Bailey, Matthew H., Liang, Wen-Wei, Foltz, Steven M., Shmulevich, Ilya, Ding, Li, Heins, Zachary, Ochoa, Angelica, Gross, Benjamin, Gao, Jianjiong, Zhang, Hongxin, Kundra, Ritika, Kandoth, Cyriac, Bahceci, Istemi, Dervishi, Leonard, Dogrusoz, Ugur, Zhou, Wanding ... Yang, Ian (2018). Oncogenic Signaling Pathways in The Cancer Genome Atlas. Cell, 173 (2), 321-337.e10. doi: 10.1016/j.cell.2018.03.035
Pathogenic Germline Variants in 10,389 Adult Cancers
Huang, Kuan-lin, Mashl, R. Jay, Wu, Yige, Ritter, Deborah I., Wang, Jiayin, Oh, Clara, Paczkowska, Marta, Reynolds, Sheila, Wyczalkowski, Matthew A., Oak, Ninad, Scott, Adam D., Krassowski, Michal, Cherniack, Andrew D., Houlahan, Kathleen E., Jayasinghe, Reyka, Wang, Liang-Bo, Zhou, Daniel Cui, Liu, Di, Cao, Song, Kim, Young Won, Koire, Amanda, McMichael, Joshua F., Hucthagowder, Vishwanathan, Kim, Tae-Beom, Hahn, Abigail, Wang, Chen, McLellan, Michael D., Al-Mulla, Fahd, Johnson, Kimberly J. ... Yang, Ian (2018). Pathogenic Germline Variants in 10,389 Adult Cancers. Cell, 173 (2), 355-370.e14. doi: 10.1016/j.cell.2018.03.039
Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics
Ding, Li, Bailey, Matthew H., Porta-Pardo, Eduard, Thorsson, Vesteinn, Colaprico, Antonio, Bertrand, Denis, Gibbs, David L., Weerasinghe, Amila, Huang, Kuan-lin, Tokheim, Collin, Cortes-Ciriano, Isidro, Jayasinghe, Reyka, Chen, Feng, Yu, Lihua, Sun, Sam, Olsen, Catharina, Kim, Jaegil, Taylor, Alison M., Cherniack, Andrew D., Akbani, Rehan, Suphavilai, Chayaporn, Nagarajan, Niranjan, Stuart, Joshua M., Mills, Gordon B., Wyczalkowski, Matthew A., Vincent, Benjamin G., Hutter, Carolyn M., Zenklusen, Jean Claude, Hoadley, Katherine A. ... Yang, Ian (2018). Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics. Cell, 173 (2), 305-320.e10. doi: 10.1016/j.cell.2018.03.033
Driver Fusions and Their Implications in the Development and Treatment of Human Cancers
Gao, Qingsong, Liang, Wen-Wei, Foltz, Steven M., Mutharasu, Gnanavel, Jayasinghe, Reyka G., Cao, Song, Liao, Wen-Wei, Reynolds, Sheila M., Wyczalkowski, Matthew A., Yao, Lijun, Yu, Lihua, Sun, Sam Q., Chen, Ken, Lazar, Alexander J., Fields, Ryan C., Wendl, Michael C., Van Tine, Brian A., Vij, Ravi, Chen, Feng, Nykter, Matti, Shmulevich, Ilya, Ding, Li, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Driver Fusions and Their Implications in the Development and Treatment of Human Cancers. Cell Reports, 23 (1), 227-238.e3. doi: 10.1016/j.celrep.2018.03.050
Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas
Knijnenburg, Theo A., Wang, Linghua, Zimmermann, Michael T., Chambwe, Nyasha, Gao, Galen F., Cherniack, Andrew D., Fan, Huihui, Shen, Hui, Way, Gregory P., Greene, Casey S., Liu, Yuexin, Akbani, Rehan, Feng, Bin, Donehower, Lawrence A., Miller, Chase, Shen, Yang, Karimi, Mostafa, Chen, Haoran, Kim, Pora, Jia, Peilin, Shinbrot, Eve, Zhang, Shaojun, Liu, Jianfang, Hu, Hai, Bailey, Matthew H., Yau, Christina, Wolf, Denise, Zhao, Zhongming, Weinstein, John N. ... Yang, Ian (2018). Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas. Cell Reports, 23 (1), 239-254.e6. doi: 10.1016/j.celrep.2018.03.076
Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas
Campbell, Joshua D., Yau, Christina, Bowlby, Reanne, Liu, Yuexin, Brennan, Kevin, Fan, Huihui, Taylor, Alison M., Wang, Chen, Walter, Vonn, Akbani, Rehan, Byers, Lauren Averett, Creighton, Chad J., Coarfa, Cristian, Shih, Juliann, Cherniack, Andrew D., Gevaert, Olivier, Prunello, Marcos, Shen, Hui, Anur, Pavana, Chen, Jianhong, Cheng, Hui, Hayes, D. Neil, Bullman, Susan, Pedamallu, Chandra Sekhar, Ojesina, Akinyemi I., Sadeghi, Sara, Mungall, Karen L., Robertson, A. Gordon, Benz, Christopher ... Yang, Ian (2018). Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas. Cell Reports, 23 (1), 194-212.e6. doi: 10.1016/j.celrep.2018.03.063
Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types
Ge, Zhongqi, Leighton, Jake S., Wang, Yumeng, Peng, Xinxin, Chen, Zhongyuan, Chen, Hu, Sun, Yutong, Yao, Fan, Li, Jun, Zhang, Huiwen, Liu, Jianfang, Shriver, Craig D., Hu, Hai, Piwnica-Worms, Helen, Ma, Li, Liang, Han, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types. Cell Reports, 23 (1), 213-226.e3. doi: 10.1016/j.celrep.2018.03.047
Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas
Way, Gregory P., Sanchez-Vega, Francisco, La, Konnor, Armenia, Joshua, Chatila, Walid K., Luna, Augustin, Sander, Chris, Cherniack, Andrew D., Mina, Marco, Ciriello, Giovanni, Schultz, Nikolaus, Sanchez, Yolanda, Greene, Casey S., The Cancer Genome Atlas Research Network and Yang, Ian (2018). Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas. Cell Reports, 23 (1), 172-180.e3. doi: 10.1016/j.celrep.2018.03.046
Molecular Characterization and Clinical Relevance of Metabolic Expression Subtypes in Human Cancers
Peng, Xinxin, Chen, Zhongyuan, Farshidfar, Farshad, Xu, Xiaoyan, Lorenzi, Philip L., Wang, Yumeng, Cheng, Feixiong, Tan, Lin, Mojumdar, Kamalika, Du, Di, Ge, Zhongqi, Li, Jun, Thomas, George V., Birsoy, Kivanc, Liu, Lingxiang, Zhang, Huiwen, Zhao, Zhongming, Marchand, Calena, Weinstein, John N., Bathe, Oliver F., Liang, Han, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Molecular Characterization and Clinical Relevance of Metabolic Expression Subtypes in Human Cancers. Cell Reports, 23 (1), 255-269.e4. doi: 10.1016/j.celrep.2018.03.077
Chiu, Hua-Sheng, Somvanshi, Sonal, Patel, Ektaben, Chen, Ting-Wen, Singh, Vivek P., Zorman, Barry, Patil, Sagar L., Pan, Yinghong, Chatterjee, Sujash S., Sood, Anil K., Gunaratne, Preethi H., Sumazin, Pavel, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context. Cell Reports, 23 (1), 297-312.e12. doi: 10.1016/j.celrep.2018.03.064
Seiler, Michael, Peng, Shouyong, Agrawal, Anant A., Palacino, James, Teng, Teng, Zhu, Ping, Smith, Peter G., Buonamici, Silvia, Yu, Lihua, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Somatic Mutational Landscape of Splicing Factor Genes and Their Functional Consequences across 33 Cancer Types. Cell Reports, 23 (1), 282-296.e4. doi: 10.1016/j.celrep.2018.01.088
Saltz, Joel, Gupta, Rajarsi, Hou, Le, Kurc, Tahsin, Singh, Pankaj, Nguyen, Vu, Samaras, Dimitris, Shroyer, Kenneth R., Zhao, Tianhao, Batiste, Rebecca, Van Arnam, John, Shmulevich, Ilya, Rao, Arvind U. K., Lazar, Alexander J., Sharma, Ashish, Thorsson, Vesteinn, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images. Cell Reports, 23 (1), 181-193.e7. doi: 10.1016/j.celrep.2018.03.086
Systematic Analysis of Splice-Site-Creating Mutations in Cancer
Jayasinghe, Reyka G., Cao, Song, Gao, Qingsong, Wendl, Michael C., Vo, Nam Sy, Reynolds, Sheila M., Zhao, Yanyan, Climente-Gonzalez, Hector, Chai, Shengjie, Wang, Fang, Varghese, Rajees, Huang, Mo, Liang, Wen-Wei, Wyczalkowski, Matthew A., Sengupta, Sohini, Li, Zhi, Payne, Samuel H., Fenyo, David, Miner, Jeffrey H., Walter, Matthew J., Vincent, Benjamin, Eyras, Eduardo, Chen, Ken, Shmulevich, Ilya, Chen, Feng, Ding, Li, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Systematic Analysis of Splice-Site-Creating Mutations in Cancer. Cell Reports, 23 (1), 270-281.e3. doi: 10.1016/j.celrep.2018.03.052
The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma
Ricketts, Christopher J., de Cubas, Aguirre A., Fan, Huihui, Smith, Christof C., Lang, Martin, Reznik, Ed, Bowlby, Reanne, Gibb, Ewan A., Akbani, Rehan, Beroukhim, Rameen, Bottaro, Donald P., Choueiri, Toni K., Gibbs, Richard A., Godwin, Andrew K., Haake, Scott, Hakimi, A. Ari, Henske, Elizabeth P., Hsieh, James J., Ho, Thai H., Kanchi, Rupa S., Krishnan, Bhavani, Kwaitkowski, David J., Lui, Wembin, Merino, Maria J., Mills, Gordon B., Myers, Jerome, Nickerson, Michael L., Reuter, Victor E., Schmidt, Laura S. ... Yang, Ian (2018). The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma. Cell Reports, 23 (1), 313-326.e5. doi: 10.1016/j.celrep.2018.03.075
Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines
Ellrott, Kyle, Bailey, Matthew H., Saksena, Gordon, Covington, Kyle R., Kandoth, Cyriac, Stewart, Chip, Hess, Julian, Ma, Singer, Chiotti, Kami E., McLellan, Michael, Sofia, Heidi J., Hutter, Carolyn, Getz, Gad, Wheeler, David, Ding, Li, The Cancer Genome Atlas Research Network and Yang, Ian (2018). Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines. Cell Systems, 6 (3), 271-281.e7. doi: 10.1016/j.cels.2018.03.002
Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas
Schaub, Franz X., Dhankani, Varsha, Berger, Ashton C., Trivedi, Mihir, Richardson, Anne B., Shaw, Reid, Zhao, Wei, Zhang, Xiaoyang, Ventura, Andrea, Liu, Yuexin, Ayer, Donald E., Hurlin, Peter J., Cherniack, Andrew D., Eisenman, Robert N., Bernard, Brady, Grandori, Carla, The Cancer Genome Atlas Network and Yang, Ian (2018). Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas. Cell Systems, 6 (3), 282-300.e2. doi: 10.1016/j.cels.2018.03.003
Marshall, Henry M., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2018). Editorial on PanCan study. Translational Lung Cancer Research, 7 (Suppl 1), S57-S59. doi: 10.21037/tlcr.2018.01.17
The contribution of respiratory microbiome analysis to a treatable traits model of care
Taylor, Steven L., O'Farrell, Hannah E., Simpson, Jodie L., Yang, Ian A. and Rogers, Geraint B. (2018). The contribution of respiratory microbiome analysis to a treatable traits model of care. Respirology, 24 (1), 19-28. doi: 10.1111/resp.13411
Yang, Ian A., Brown, Juliet L., George, Johnson, Jenkins, Sue, McDonald, Christine F., McDonald, Vanessa M., Phillips, Kirsten, Smith, Brian J., Zwar, Nicholas A. and Dabscheck, Eli (2017). COPD-X australian and New Zealand guidelines for the diagnosis and management of chronic obstructive pulmonary disease: 2017 update. Medical Journal of Australia, 207 (10), 436-442. doi: 10.5694/mja17.00686
Marshall, Henry M., Zhao, Henry, Bowman, Rayleen V., Passmore, Linda H., McCaul, Elizabeth M., Yang, Ian A. and Fong, Kwun M. (2017). The effect of different radiological models on diagnostic accuracy and lung cancer screening performance. Thorax, 72 (12), 1147-1150. doi: 10.1136/thoraxjnl-2016-209624
Ultrafine particle transport and deposition in a large scale 17-generation lung model
Islam, Mohammad S., Saha, Suvash C., Sauret, Emilie, Gemci, Tevfik, Yang, Ian A. and Gu, Y. T. (2017). Ultrafine particle transport and deposition in a large scale 17-generation lung model. Journal of Biomechanics, 64, 16-25. doi: 10.1016/j.jbiomech.2017.08.028
Lee, Xiang Wen, Marshall, Henry M., Leong, Steven C., O'Rourke, Rachael L., Steinke, Karin, Mirjalili, Negar, Bowman, Rayleen V., Yang, Ian A. and Fong, Kwun M. (2017). Is Digital Tomosynthesis on Par With Computed Tomography for the Detection and Measurement of Pulmonary Nodules?. Journal of Thoracic Imaging, 32 (6), W67-W68. doi: 10.1097/RTI.0000000000000298
RE: Proportion of Never-Smoker Non-Small Cell Lung Cancer Patients at Three Diverse Institutions
Page, Barbara J, Bowman, Rayleen V, Yang, Ian A and Fong, Kwun M (2017). RE: Proportion of Never-Smoker Non-Small Cell Lung Cancer Patients at Three Diverse Institutions. Journal of the National Cancer Institute, 110 (4), 432-432. doi: 10.1093/jnci/djx216
Ist eine thrombophilie-untersuchung bei patienten mit venöser thromboembolie notwendig?
Kudo, M., Lee, H. L., Yang, I. A. and Masel, P. J. (2017). Ist eine thrombophilie-untersuchung bei patienten mit venöser thromboembolie notwendig?. Vasomed, 29 (5).
Gibson, Peter G., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Marks, Guy B., Baraket, Melissa, Powell, Heather, Taylor, Steven L., Leong, Lex E. X., Rogers, Geraint B. and Simpson, Jodie L. (2017). Effect of azithromycin on asthma exacerbations and quality of life in adults with persistent uncontrolled asthma (AMAZES): a randomised, double-blind, placebo-controlled trial. The Lancet, 390 (10095), 659-668. doi: 10.1016/S0140-6736(17)31281-3
Stevanovic, S., Vaughan, A., Hedayat, F., Salimi, F., Rahman, M. M., Zare, A., Brown, R. A., Brown, R. J., Wang, H., Zhang, Z., Wang, X., Bottle, S. E., Yang, I. A. and Ristovski, Z. D. (2017). Oxidative potential of gas phase combustion emissions - an underestimated and potentially harmful component of air pollution from combustion processes. Atmospheric Environment, 158, 227-235. doi: 10.1016/j.atmosenv.2017.03.041
Taylor, Steven L., Leong, Lex E. X., Choo, Jocelyn M., Wesselingh, Steve, Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Baraket, Melissa, Marks, Guy B., Gibson, Peter G., Simpson, Jodie L. and Rogers, Geraint B. (2017). Inflammatory phenotypes in patients with severe asthma are associated with distinct airway microbiology. Journal of Allergy and Clinical Immunology, 141 (1), 94-103.e15. doi: 10.1016/j.jaci.2017.03.044
Radiation therapy for preventing instrumentation track metastases in malignant pleural mesothelioma
Eastment, J. G., Burke, J. P., Fong, K. M., Yang, I. A. and Bowman, R. V. (2017). Radiation therapy for preventing instrumentation track metastases in malignant pleural mesothelioma. Cochrane Database of Systematic Reviews, 2017 (2) CD012541. doi: 10.1002/14651858.CD012541
Fong, Kwun M., Bowman, Rayleen V. and Yang, Ian A. (2017). Genomics of lung cancer. Journal of Thoracic Disease, 9 (2), E155-E157. doi: 10.21037/jtd.2017.02.29
Utility of thrombophilia testing in patients with venous thromboembolism
Kudo, Masataka, Lee, Huang L., Yang, Ian A. and Masel, Philip J. (2016). Utility of thrombophilia testing in patients with venous thromboembolism. Journal of Thoracic Disease, 8 (12), 3697-3703. doi: 10.21037/jtd.2016.12.40
Hew, M., Gillman, A., Sutherland, M., Wark, P., Bowden, J., Guo, M., Reddel, H. K., Jenkins, C., Marks, G. B., Thien, F., Rimmer, J., Katsoulotos, G. P., Cook, M., Yang, I., Katelaris, C., Bowler, S., Langton, D., Wright, C., Bint, M., Yozghatlian, V., Burgess, S., Sivakumaran, P., Yan, K. Y., Kritikos, V., Peters, M., Baraket, M., Aminazad, A., Robinson, P., Jaffe, A. ... Gibson, P. G. (2016). Real-life effectiveness of omalizumab in severe allergic asthma above the recommended dosing range criteria. Clinical and Experimental Allergy, 46 (11), 1407-1415. doi: 10.1111/cea.12774
Ko, Fanny W., Chan, Ka Pang, Hui, David S., Goddard, John R., Shaw, Janet G., Reid, David W. and Yang, Ian A. (2016). Acute exacerbation of COPD. Respirology, 21 (7), 1152-1165. doi: 10.1111/resp.12780
Marshall, Henry M., Courtney, Deborah A., Passmore, Linda H., McCaul, Elizabeth M., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2016). Brief tailored smoking cessation counseling in a lung cancer screening population is feasible: a pilot randomized controlled trial. Nicotine and Tobacco Research, 18 (7), 1665-1669. doi: 10.1093/ntr/ntw010
Gibson, P. G., Reddel, H., McDonald, V. M., Marks, G., Jenkins, C., Gillman, A., Upham, J., Sutherland, M., Rimmer, J., Thien, F., Katsoulotos, G. P., Cook, M., Yang, I., Katelaris, C., Bowler, S., Langton, D., Robinson, P., Wright, C., Yozghatlian, V., Burgess, S., Sivakumaran, P., Jaffe, A., Bowden, J., Wark, P. A., Yan, K. Y., Kritikos, V., Peters, M., Hew, M., Aminazad, A. ... Guo, M. (2016). Effectiveness and response predictors of omalizumab in a severe allergic asthma population with a high prevalence of comorbidities: the Australian Xolair Registry. Internal Medicine Journal, 46 (9), 1054-1062. doi: 10.1111/imj.13166
Periostin levels and eosinophilic inflammation in poorly-controlled asthma
Simpson, Jodie L., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Jia, Guiquan, Holweg, Cecile T. J. and Gibson, Peter G. (2016). Periostin levels and eosinophilic inflammation in poorly-controlled asthma. BMC Pulmonary Medicine, 16 (1) 67, 67.1-67.7. doi: 10.1186/s12890-016-0230-4
Zhao, Henry, Marshall, Henry M., Yang, Ian A., Bowman, Rayleen V., Ayres, John, Crossin, Jane, Lau, Melanie, Slaughter, Richard E., Redmond, Stanley, Passmore, Linda, McCaul, Elizabeth, Courtney, Deborah, Leong, Steven C., Windsor, Morgan, Zimmerman, Paul V. and Fong, Kwun M. (2016). Screen-detected subsolid pulmonary nodules: long-term follow-up and application of the PanCan lung cancer risk prediction model. British Journal of Radiology, 89 (1060) 20160016, 20160016. doi: 10.1259/bjr.20160016
Use of inhaled corticosteroids in COPD: improving efficacy
Yang, Ian A., Shaw, Janet G., Goddard, John R., Clarke, Melissa S. and Reid, David W. (2016). Use of inhaled corticosteroids in COPD: improving efficacy. Expert Review of Respiratory Medicine, 10 (3), 339-350. doi: 10.1586/17476348.2016.1151789
Airway dysbiosis: Haemophilus influenzae and Tropheryma in poorly controlled asthma
Simpson, Jodie L., Daly, Joshua, Baines, Katherine J., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Hugenholtz, Philip, Willner, Dana and Gibson, Peter G. (2016). Airway dysbiosis: Haemophilus influenzae and Tropheryma in poorly controlled asthma. European Respiratory Journal, 47 (3), 792-800. doi: 10.1183/13993003.00405-2015
Simpson, Jodie L., Carroll, Melanie, Yang, Ian A., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Gibson, Peter G. and Upham, John W. (2016). Reduced antiviral interferon production in poorly controlled asthma is associated with neutrophilic inflammation and high-dose inhaled corticosteroids. Chest, 149 (3), 704-713. doi: 10.1016/j.chest.2015.12.018
Page, B. J., Bowman, R. V., Yang, I. A. and Fong, K. M. (2016). A survey of lung cancer in rural and remote Aboriginal and Torres Strait Islander communities in Queensland: health views that impact on early diagnosis and treatment. Internal Medicine Journal, 46 (2), 171-176. doi: 10.1111/imj.12948
Blood cytotoxic/inflammatory mediators in non-eosinophilic asthma
Hodge, S., Hodge, G., Simpson, J. L., Yang, I. A., Upham, J., James, A., Gibson, P. G. and Reynolds, P. N. (2016). Blood cytotoxic/inflammatory mediators in non-eosinophilic asthma. Clinical and Experimental Allergy, 46 (1), 60-70. doi: 10.1111/cea.12634
Précis of the COPD clinical guidelines (The 'even more concise' guide to COPD)
Yang, Ian, McDonald, Christine and Dabscheck, Eli (2015). Précis of the COPD clinical guidelines (The 'even more concise' guide to COPD). Medicine Today, 16 (12), 30-38.
How microRNAs orchestrate the lung's biological responses
Yang, Ian A. and Vaughan, Annalicia (2015). How microRNAs orchestrate the lung's biological responses. Respirology, 20 (8), 1149-1150. doi: 10.1111/resp.12647
Lung cancer screening feasibility in Australia
Marshall, Henry M., Bowman, Rayleen V., Ayres, John, Crossin, Jane, Lau, Melanie, Slaughter, Richard E., Redmond, Stanley, Passmore, Linda, McCaul, Elizabeth, Courtney, Deborah, Leong, Steven C., Windsor, Morgan, Zimmerman, Paul V., Yang, Ian A. and Fong, Kwun M. (2015). Lung cancer screening feasibility in Australia. European Respiratory Journal, 45 (6), 1734-1737. doi: 10.1183/09031936.00208714
Duhig, Edwina Elizabeth, Dettrick, Andrew, Godbolt, David Burleigh, Pauli, John, van Zwieten, Anthony, Hansen, Aaron Richard, Yang, Ian Anthony, Fong, Kwun Meng, Clarke, Belinda E. and Bowman, Rayleen V. (2015). Mitosis trumps T stage and proposed international association for the study of lung cancer/American thoracic society/european respiratory society classification for prognostic value in resected stage 1 lung adenocarcinoma. Journal of Thoracic Oncology, 10 (4), 673-681. doi: 10.1097/JTO.0000000000000446
Year in review 2014: chronic obstructive pulmonary disease, asthma and airway biology
Lim, Tow Keang, Ko, Fanny W.S., Thomas, Paul S., Grainge, Chris and Yang, Ian A. (2015). Year in review 2014: chronic obstructive pulmonary disease, asthma and airway biology. Respirology, 20 (3), 510-518. doi: 10.1111/resp.12488
Anti-inflammatory deficiencies in neutrophilic asthma: reduced galectin-3 and IL-1RA/IL-1 beta
Gao, Peng, Gibson, Peter G., Baines, Katherine J., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Zhang, Jie and Simpson, Jodie L. (2015). Anti-inflammatory deficiencies in neutrophilic asthma: reduced galectin-3 and IL-1RA/IL-1 beta. Respiratory Research, 16 (5) 5, 5. doi: 10.1189/s12931-014-0163-5
Heller, Gerwin, Altenberger, Corinna, Schmid, Bianca, Marhold, Maximilian, Tomasich, Erwin, Ziegler, Barbara, Mullauer, Leonhard, Minichsdorfer, Christoph, Lang, Gyorgy, End-Pfutzenreuter, Adelheid, Dome, Balazs, Arns, Britt-Madeleine, Fong, Kwun M., Wright, Casey M., Yang, Ian A., Klepetko, Walter, Zielinski, Christoph C. and Zochbauer-Muller, Sabine (2015). DNA methylation transcriptionally regulates the putative tumor cell growth suppressor ZNF677 in non-small cell lung cancers. Oncotarget, 6 (1), 394-408. doi: 10.18632/oncotarget.2697
Vaughan, Annalicia, Stevanovic, Svetlana , Morrison, Leanne E. , Pourkhesalian, Ali Mohammad , Rahman, Mostafizur , Zare, Ali , Miljevic, Branka , Goh, Felicia , Relan, Vandana , Bowman, Rayleen V. , Fong, Kwun M. , Bottle, Steven E. , Ristovski, Zoran D. and Yang, Ian A. (2015). Removal of Organic Content from Diesel Exhaust Particles Alters Cellular Responses of Primary Human Bronchial Epithelial Cells Cultured at an Air-Liquid Interface. Journal of Environmental & Analytical Toxicology, 05 (05). doi: 10.4172/2161-0525.1000316
The current and future roles of genomics
Fong, Kwun M., Daniels, Marissa, Goh, Felicia, Yang, Ian A. and Bowman, Rayleen V. (2015). The current and future roles of genomics. ERS Monograph, 2015, 79-94. doi: 10.1183/2312508X.10009614
Anxiety and depression-important psychological comorbidities of COPD
Pumar, Marsus I., Gray, Curt R., Walsh, James R., Yang, Ian A., Rolls, Tricia A. and Ward, Donna L. (2014). Anxiety and depression-important psychological comorbidities of COPD. Journal of Thoracic Disease, 6 (11), 1615-1631. doi: 10.3978/j.issn.2072-1439.2014.09.28
Biomarkers of progression of chronic obstructive pulmonary disease (COPD)
Shaw, Janet G., Vaughan, Annalicia, Dent, Annette G., O'Hare, Phoebe E., Goh, Felicia, Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2014). Biomarkers of progression of chronic obstructive pulmonary disease (COPD). Journal of Thoracic Disease, 6 (11), 1532-1547. doi: 10.3978/j.issn.2072-1439.2014.11.33
Implementing clinical guidelines for chronic obstructive pulmonary disease: barriers and solutions
Overington, Jeff D., Huang, Yao C., Abramson, Michael J., Brown, Juliet L., Goddard, John R., Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2014). Implementing clinical guidelines for chronic obstructive pulmonary disease: barriers and solutions. Journal of Thoracic Disease, 6 (11), 1586-1596. doi: 10.3978/j.issn.2072-1439.2014.11.25
Yang, Ian A. and Zimmerman, Paul V. (2014). Preface. Journal of Thoracic Disease, 6 (11), 1521-1524. doi: 10.3978/j.issn.2072-1439.2014.11.28
The potential of genome-wide analyses to improve non-small-cell lung cancer care
Wright, Casey M., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2014). The potential of genome-wide analyses to improve non-small-cell lung cancer care. Lung Cancer Management, 3 (5), 383-396. doi: 10.2217/lmt.14.31
O'Hare, Phoebe E., Ayres, Jonny F., O'Rourke, Rachael L., Slaughter, Richard E., Marshall, Henry M., Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2014). Coronary artery calcification on computed tomography correlates with mortality in chronic obstructive pulmonary disease. Journal of Computer Assisted Tomography, 38 (5), 753-759. doi: 10.1097/RCT.0000000000000119
Full blood count parameters for the detection of asthma inflammatory phenotypes
Zhang, X. -Y., Simpson, J. L., Powell, H., Yang, I. A., Upham, J. W., Reynolds, P. N., Hodge, S., James, A. L., Jenkins, C., Peters, M. J., Lin, J. -T. and Gibson, P. G. (2014). Full blood count parameters for the detection of asthma inflammatory phenotypes. Clinical and Experimental Allergy, 44 (9), 1137-1145. doi: 10.1111/cea.12345
Comprehensive molecular profiling of lung adenocarcinoma: the cancer genome atlas research network
The Cancer Genome Atlas Research Network, Duhig, Edwina, Clarke, Belinda, Yang, Ian A., Fong, Kwun M., Hunter, Lindy, Windsor, Morgan and Bowman, Rayleen V. (2014). Comprehensive molecular profiling of lung adenocarcinoma: the cancer genome atlas research network. Nature, 511 (7511), 543-550. doi: 10.1038/nature13385
A retrospective study of volume doubling time in surgically resected non-small cell lung cancer
Mackintosh, John A., Marshall, Henry M., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2014). A retrospective study of volume doubling time in surgically resected non-small cell lung cancer. Respirology, 19 (5), 755-762. doi: 10.1111/resp.12311
Kim, Kyungchul, Waterer, Grant, Thomson, Rachel, Yang, Ian A., Nashi, Najla, Tan, Dino B. A. and Price, Patricia (2014). Levels of anti-cytokine antibodies may be elevated in patients with pulmonary disease associated with non-tuberculous mycobacteria. Cytokine, 66 (2), 160-163. doi: 10.1016/j.cyto.2014.01.005
Year in review 2013: chronic obstructive pulmonary disease, asthma and airway biology
Ko, Fanny W. S., Lim, Tow K., Hancox, Robert J. and Yang, Ian A. (2014). Year in review 2013: chronic obstructive pulmonary disease, asthma and airway biology. Respirology, 19 (3), 438-447. doi: 10.1111/resp.12252
Electromagnetic navigation bronchoscopy for the diagnosis of Aspergillus infection
Chan, Samuel, Pumar, Marsus I., Leong, Steven C., Horvath, Robert L., Marshall, Henry M., Yang, Ian A. and Fong, Kwun M. (2014). Electromagnetic navigation bronchoscopy for the diagnosis of Aspergillus infection. Respirology Case Reports, 2 (1), 30-32. doi: 10.1002/rcr2.39
Simpson, Jodie L., Gibson, Peter G., Yang, Ian A., Upham, John, James, Alan, Reynolds, Paul N., Hodge, Sandra and AMAZES Study Research Group (2014). Altered sputum granzyme B and granzyme B/proteinase inhibitor-9 in patients with non-eosinophilic asthma. Respirology, 19 (2), 280-287. doi: 10.1111/resp.12213
MicroRNA-34c is associated with emphysema severity and modulates SERPINE1 expression
Savarimuthu Francis, Santiyagu M., Davidson, Morgan R., Tan, Maxine E., Wright, Casey M., Clarke, Belinda E., Duhig, Edwina E., Bowman, Rayleen V., Hayward, Nicholas K ., Fong, Kwun M. and Yang, Ian A. (2014). MicroRNA-34c is associated with emphysema severity and modulates SERPINE1 expression. BMC Genomics, 15 (1) 88. doi: 10.1186/1471-2164-15-88
Glycopyrronium bromide for chronic obstructive pulmonary disease (Protocol)
Burke, Joseph P, Eastment, Jacques G., Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2013). Glycopyrronium bromide for chronic obstructive pulmonary disease (Protocol). Cochrane Database of Systematic Reviews, 2013 (10) CD010798. doi: 10.1002/14651858.CD010798
An emerging place for lung cancer genomics in 2013
Daniels, Marissa G., Bowman, Rayleen V., Yang, Ian A., Govindan, Ramaswamy and Fong, Kwun M. (2013). An emerging place for lung cancer genomics in 2013. Journal of Thoracic Disease, 5 (SUPPL.5), S491-S497. doi: 10.3978/j.issn.2072-1439.2013.10.06
Genetic susceptibility to lung cancer and co-morbidities
Yang, Ian A., Holloway, John W. and Fong, Kwun M. (2013). Genetic susceptibility to lung cancer and co-morbidities. Journal of Thoracic Disease, 5 (SUPPL.5), S454-S462. doi: 10.3978/j.issn.2072-1439.2013.08.06
Leong, Steven C., Marshall, Henry M., Bint, Michael, Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2013). Mediastinal abscess after endobronchial ultrasound-guided transbronchial needle aspiration: a case report and literature review. Journal of Bronchology and Interventional Pulmonology, 20 (4), 338-341. doi: 10.1097/LBR.0b013e31829ae243
Screening for lung cancer with low-dose computed tomography: a review of current status
Marshall, Henry M., Bowman, Rayleen V., Yang, Ian A., Fong, Kwun M. and Berg, Christine D. (2013). Screening for lung cancer with low-dose computed tomography: a review of current status. Journal of Thoracic Disease, 5 (SUPPL.5), S524-S539. doi: 10.3978/j.issn.2072-1439.2013.09.06
Francis, Santiyagu M. Savarimuthu, Tan, Maxine E., Fung, Pamela R., Shaw, Janet G., Semmler, Annalese B. T., Nataatmadja, Maria, Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2013). Peripheral compartment innate immune response to Haemophilus influenzae and Streptococcus pneumoniae in chronic obstructive pulmonary disease patients. Innate Immunity, 19 (4), 428-437. doi: 10.1177/1753425912466926
Year in review 2012: Asthma and chronic obstructive pulmonary disease
Yang, Ian A., Ko, Fanny W. -S., Lim, T. K. and Hancox, Robert J. (2013). Year in review 2012: Asthma and chronic obstructive pulmonary disease. Respirology, 18 (3), 565-572. doi: 10.1111/resp.12049
Inhaled corticosteroids for subacute and chronic cough in adults (Review)
Johnstone, Kate J., Chang, Anne B., Fong, Kwun M., Bowman, Rayleen V. and Yang, Ian A. (2013). Inhaled corticosteroids for subacute and chronic cough in adults (Review). Cochrane Database of Systematic Reviews, 2013 (3) CD009305, CD009305. doi: 10.1002/14651858.CD009305.pub2
Genome-wide CpG island methylation analyses in non-small cell lung cancer patients
Heller, Gerwin, Babinsky, Valerie N., Ziegler, Barbara, Weinzierl, Marlene, Noll, Christian, Altenberger, Corinna, Müllauer, Leonhard, Dekan, Gerhard, Grin, Yuliya, Lang, György, End-Pfützenreuter, Adelheid, Steiner, Irene, Zehetmayer, Sonja, Döme, Balazs, Arns, Britt-Madeleine, Fong, Kwun M., Wright, Casey M., Yang, Ian A., Klepetko, Walter, Posch, Martin, Zielinski, Christoph C. and Zöchbauer-Müller, Sabine (2013). Genome-wide CpG island methylation analyses in non-small cell lung cancer patients. Carcinogenesis, 34 (3), 513-521. doi: 10.1093/carcin/bgs363
Phenotypes and Karyotypes of Human Malignant Mesothelioma Cell Lines
Relan, Vandana, Morrison, Leanne, Parsonson, Kylie, Clarke, Belinda E., Duhig, Edwina E., Windsor, Morgan N., Matar, Kevin S., Naidoo, Rishendran, Passmore, Linda, McCaul, Elizabeth, Courtney, Deborah, Yang, Ian A., Fong, Kwun M. and Bowman, Rayleen V. (2013). Phenotypes and Karyotypes of Human Malignant Mesothelioma Cell Lines. Plos One, 8 (3) e58132, e58132.1-e58132.8. doi: 10.1371/journal.pone.0058132
Queensland Lung Cancer Screening Study: rationale, design and methods
Marshall, H. M., Bowman, R. V., Crossin, J., Lau, M. A., Slaughter, R. E., Passmore, L. H., McCaul, E. M., Courtney, D. A., Windsor, M. N., Yang, I. A., Smith, I. R., Keir, B. J., Hayes, T. J., Redmond, S. J., Zimmerman, P. V. and Fong, K. M. (2013). Queensland Lung Cancer Screening Study: rationale, design and methods. Internal Medicine Journal, 43 (2), 174-182. doi: 10.1111/j.1445-5994.2012.02789.x
Air pollution and lung health: an epilogue
Yang, Ian A. and Holgate, Stephen T. (2013). Air pollution and lung health: an epilogue. Respirology, 18 (1), 3-4. doi: 10.1111/j.1440-1843.2012.02229.x
COPD management: An integrated approach
Yang, Ian and Jenkins, Christine (2013). COPD management: An integrated approach. Medicine Today, 14 (1), 10-18.
Impaired macrophage phagocytosis in non-eosinophilic asthma
Simpson, J. L., Gibson, P. G., Yang, I. A., Upham, J., James, A., Reynolds, P. N., Hodge, S. and AMAZES Study Research Group (2013). Impaired macrophage phagocytosis in non-eosinophilic asthma. Clinical and Experimental Allergy, 43 (1), 29-35. doi: 10.1111/j.1365-2222.2012.04075.x
Personalizing and targeting therapy for COPD - The role of molecular and clinical biomarkers
Goh, Felicia, Shaw, Janet G., Francis. Santiyagu M. Savarimuthu, Vaughan, Annalicia, Morrison, Leanne, Relan, Vandana, Marshall, Henry M., Dent, Annette G., O'Hare, Phoebe E., Hsiao, Amy, Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2013). Personalizing and targeting therapy for COPD - The role of molecular and clinical biomarkers. Expert Review of Respiratory Medicine, 7 (6), 593-605. doi: 10.1586/17476348.2013.842468
Inhaled corticosteroids for stable chronic obstructive pulmonary disease (Review)
Yang, Ian A., Clarke, Melissa S., Sim, Esther H. A. and Fong, Kwun M. (2012). Inhaled corticosteroids for stable chronic obstructive pulmonary disease (Review). Cochrane Database of Systematic Reviews, 2016 (7) CD002991. doi: 10.1002/14651858.CD002991.pub3
Shaw, Janet G., Dent, Annette G., Passmore, Linda H., Burstow, Darryl J., Bowman, Rayleen V., Zimmerman, Paul V., Fong, Kwun M. and Yang, Ian A. (2012). Genetic influences on right ventricular systolic pressure (RVSP) in chronic obstructive pulmonary disease (COPD). BMC Pulmonary Medicine, 12 (1) 25, 25.1-25.9. doi: 10.1186/1471-2466-12-25
Genomics and the respiratory effects of air pollution exposure
Holloway, John W., Francis, Santiyagu, Fong, Kwun M. and Yang, Ian A. (2012). Genomics and the respiratory effects of air pollution exposure. Respirology, 17 (4), 590-600. doi: 10.1111/j.1440-1843.2012.02164.x
Electromagnetic navigation bronchoscopy: A descriptive analysis
Leong, Steven, Ju, Hong, Marshall, Henry, Bowman, Rayleen, Yang, Ian, Ree, Ann-Maree, Saxon, Cathy and Fong, Kwun M. (2012). Electromagnetic navigation bronchoscopy: A descriptive analysis. Journal of Thoracic Disease, 4 (2), 173-185. doi: 10.3978/j.issn.2072-1439.2012.03.08
Wright, Casey M., Francis, Santiyagu M. Savarimuthu, Tan, Maxine E., Martins, Maria U., Winterford, Clay, Davidson, Morgan R., Duhig, Edwina E., Clarke, Belinda E., Hayward, Nicholas K., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2012). MS4A1 Dysregulation in Asbestos-Related Lung Squamous Cell Carcinoma Is Due to CD20 Stromal Lymphocyte Expression. PLoS One, 7 (4) e34943, e34943-1-e34943-9. doi: 10.1371/journal.pone.0034943
Whole genome sequencing for lung cancer
Daniels, Marissa, Goh, Felicia, Wright, Casey M., Sriram, Krishna B., Relan, Vandana, Clarke, Belinda E., Duhig, Edwina E., Bowman, Rayleen V., Yang, Ian A. and Fong, Kwun M. (2012). Whole genome sequencing for lung cancer. Journal of Thoracic Disease, 4 (2), 155-163. doi: 10.3978/j.issn.2072-1439.2012.02.01
Year in review 2011: Asthma, chronic obstructive pulmonary disease and airway biology
Knight, Darryl A., Yang, Ian A., Ko, Fanny W. S. and Lim, T. K. (2012). Year in review 2011: Asthma, chronic obstructive pulmonary disease and airway biology. Respirology, 17 (3), 563-572. doi: 10.1111/j.1440-1843.2012.02126.x
Sriram, Krishna B., Larsen, Jill E., Francis, Santiyagu M. Savarimuthu, Wright, Casey M., Clarke, Belinda E., Duhig, Edwina E., Brown, Kevin M., Hayward, Nicholas K., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2012). Array-comparative genomic hybridization reveals loss of SOCS6 is associated with poor prognosis in primary lung squamous cell carcinoma. Plos One, 7 (2) e30398, e30398-1-e30398-12. doi: 10.1371/journal.pone.0030398
Respiratory health effects of diesel particulate matter
Ristovski, Zoran D., Miljevic, Branka, Surawski, Nicholas C., Morawska, Lidia, Fong, Kwun M., Goh, Felicia and Yang, Ian A. (2012). Respiratory health effects of diesel particulate matter. Respirology, 17 (2), 201-212. doi: 10.1111/j.1440-1843.2011.02109.x
The science behind the 7th edition Tumour, Node, Metastasis staging system for lung cancer
Marshall, Henry M., Leong, Steven C., Bowman, Rayleen V., Yang, Ian A. and Fong, Kwun M. (2012). The science behind the 7th edition Tumour, Node, Metastasis staging system for lung cancer. Respirology, 17 (2), 247-260. doi: 10.1111/j.1440-1843.2011.02083.x
Sriram, Krishna B., Relan, Vandana, Clarke, Belinda E., Duhig, Edwina E., Windsor, Morgan N., Matar, Kevin S., Naidoo, Rishendran, Passmore, Linda, McCaul, Elizabeth, Courtney, Deborah, Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2012). Pleural fluid cell-free DNA integrity index to identify cytologically negative malignant pleural effusions including mesotheliomas. BMC Cancer, 12 (428) 428, 428-1-428-12. doi: 10.1186/1471-2407-12-428
Mesothelial markers in high-grade breast carcinoma
Duhig, Edwina E., Kalpakos, Lydia, Yang, Ian A. and Clarke, Belinda E. (2011). Mesothelial markers in high-grade breast carcinoma. Histopathology, 59 (5), 957-964. doi: 10.1111/j.1365-2559.2011.04036.x
Screening for activating EGFR mutations in surgically resected non-small cell lung cancer
Sriram, Krishna B., Tan, Maxine E., Savarimuthu, Santiyagu M., Wright, Casey M., Relan, Vandana, Stockwell, Rebecca E., Clarke, Belinda E., Duhig, Edwina E., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2011). Screening for activating EGFR mutations in surgically resected non-small cell lung cancer. European Respiratory Journal, 38 (4), 903-910. doi: 10.1183/09031936.00190110
Diagnostic molecular biomarkers for malignant pleural effusions
Sriram, Krishna B., Relan, Vandana, Clarke, Belinda E., Duhig, Edwina E., Yang, Ian A., Bowman, Rayleen V., Lee, Y.C. Gary and Fong, Kwun M. (2011). Diagnostic molecular biomarkers for malignant pleural effusions. Future Oncology, 7 (6), 737-752. doi: 10.2217/FON.11.45
Common pathogenic mechanisms and pathways in the development of COPD and lung cancer
Yang, Ian A., Relan, Vandana, Wright, Casey M., Davidson, Morgan R., Sriram, Krishna B., Savarimuthu Francis, Santiyagu M., Clarke, Belinda E., Duhig, Edwina E., Bowman, Rayleen V. and Fong, Kwun M. (2011). Common pathogenic mechanisms and pathways in the development of COPD and lung cancer. Expert Opinion on Therapeutic Targets, 15 (4), 439-456. doi: 10.1517/14728222.2011.555400
Savarimuthu Francis, Santiyagu M., Larsen, Jill E., Pavey, Sandra J., Duhig, Edwina E., Clarke, Belinda E., Bowman, Rayleen V., Hayward, Nick K., Fong, Kwun M. and Yang, Ian A. (2011). Genes and gene ontologies common to airflow obstruction and emphysema in the lungs of patients with COPD. PLoS One, 6 (3) e17442, e17442. doi: 10.1371/journal.pone.0017442
Genomic medicine in non-small cell lung cancer: Paving the path to personalized care
Sriram, K.B., Larsen, J.E., Yang, I.A., Bowman, R.V. and Fong, K.M. (2011). Genomic medicine in non-small cell lung cancer: Paving the path to personalized care. Respirology, 16 (2), 257-263. doi: 10.1111/j.1440-1843.2010.01892.x
Inhaled corticosteroids for subacute and chronic cough in adults
Johnstone, Kate, Fong, Kwun M., Bowman, Rayleen, Chang, Anne B. and Yang, Ian A. (2011). Inhaled corticosteroids for subacute and chronic cough in adults. Cochrane Database of Systematic Reviews, 1-9. doi: 10.1002/14651858.cd009305
EGFR mutation testing in non-small cell lung cancer
Sriram, K. B., Francis, S. M. Savarimuthu, Tan, M. E., Bowman, R. V., Yang, I. A. and Fong, K. M. (2010). EGFR mutation testing in non-small cell lung cancer. Current Respiratory Medicine Reviews, 6 (4), 310-321. doi: 10.2174/157339810793563776
Clarke, M. S., Wills, R.-A., Bowman, R. V., Zimmerman, P. V., Fong, K. M., Coory, M. D. and Yang, I. A. (2010). Exploratory study of the 'weekend effect' for acute medical admissions to public hospitals in Queensland, Australia. Internal Medicine Journal, 40 (11), 777-783. doi: 10.1111/j.1445-5994.2009.02067.x
MicroRNA-218 is deleted and downregulated in lung squamous cell carcinoma
Davidson, MR, Larsen, JE, Yang, IA, Hayward, NK, Clarke, BE, Duhig, EE, Passmore, LH, Bowman, RV and Fong, KM (2010). MicroRNA-218 is deleted and downregulated in lung squamous cell carcinoma. PLoS ONE, 5 (9) e12560, e12560-1-e12560-10. doi: 10.1371/journal.pone.0012560
ADAM28: A potential oncogene involved in asbestos-related lung adenocarcinomas
Wright, CM, Larsen, JE, Hayward, NK, Martins, MU, Tan, ME, Davidson, MR, Savarimuthu, SM, McLachlan, RE, Passmore, LH, Windsor, MN, Clarke, BE, Duhig, EE, Yang, IA, Bowman, RV and Fong, KM (2010). ADAM28: A potential oncogene involved in asbestos-related lung adenocarcinomas. Genes Chromosomes & Cancer, 49 (8), 688-698. doi: 10.1002/gcc.20779
HollowayJohn W., Yang, Ian A. and Holgate, Stephen T. (2010). Genetics of allergic disease. Journal of Allergy and Clinical Immunology, 125 (2, Supp. 2), S81-S94. doi: 10.1016/j.jaci.2009.10.071
Year-in-review 2009: Asthma, COPD and airway biology
Reddel, Helen K., Upham, John W., Salvi, Sundeep S. and Yang, Ian A. (2010). Year-in-review 2009: Asthma, COPD and airway biology. Respirology, 15 (2), 365-376. doi: 10.1111/j.1440-1843.2009.01702.x
Wright, C. M., Larsen, J. E., Colosimo, M. L., Barr, J. J., Chen, L., McLachlan, R. E., Yang, I. A., Bowman, R. V. and Fong, K. M. (2010). Genetic association study of CYP1A1 polymorphisms identifies risk haplotypes in nonsmall cell lung cancer. European Respiratory Journal, 35 (1), 152-159. doi: 10.1183/09031936.00120808
Variability in the rate of prescription and cost of domiciliary oxygen therapy in Australia
Serginson, John G., Yang, Ian A., Armstrong, John G., Cooper, David M., Matthiesson, Anthony M., Morrison, Stephen C., Gair, Judy M., Cooper, Barbara and Zimmerman, Paul V. (2009). Variability in the rate of prescription and cost of domiciliary oxygen therapy in Australia. Medical Journal of Australia, 191 (10), 549-553. doi: 10.5694/j.1326-5377.2009.tb03308.x
Pappachan, John V., Coulson, Tim G., Child, Nicholas J. A., Markham, David J., Nour, Sarah M., Pulletz, Mark C. K., Rose-Zerilli, Matthew J., de Courcey-Golder, Kim, Barton, Sheila J., Yang, Ian A. and Holloway, John W. (2009). Mortality in adult intensive care patients with severe systemic inflammatory response syndromes is strongly associated with the hypo-immune TNF-238A polymorphism. Immunogenetics, 61 (10), 657-662. doi: 10.1007/s00251-009-0395-6
Expression profiling identifies genes involved in emphysema severity
Francis, Santiyagu M. Savarimuthu, Larsen, Jill E., Pavey, Sandra J., Bowman, Rayleen V., Hayward, Nicholas K., Fong, Kwun M. and Yang, Ian A. (2009). Expression profiling identifies genes involved in emphysema severity. Respiratory Research, 10 (1) 81, 1-10. doi: 10.1186/1465-9921-10-81
Genetic susceptibility to the respiratory effects of air pollution
Yang, I. A., Fong, K. M., Zimmerman, P. V., Holgate, S. T. and Holloway, J. W. (2009). Genetic susceptibility to the respiratory effects of air pollution. Postgraduate Medical Journal, 85 (1006), 428-436. doi: 10.1136/thx.2007.079426
Epigenomic targets for the treatment of respiratory disease
Bowman, Rayleen V., Wright, Casey M., Davidson, Mprgan R., Francis, Santiyagu M., Yang, Ian A. and Fong, Kwun M. (2009). Epigenomic targets for the treatment of respiratory disease. Expert Opinion on Therapeutic Targets, 13 (6), 625-640. doi: 10.1517/14728220902926119
Deconstructing COPD using genomic tools
Yang, Ian A. and Francis, Santiyagu M. Savarimuthu (2009). Deconstructing COPD using genomic tools. Respirology, 14 (3), 313-317. doi: 10.1111/j.1440-1843.2009.01483.x
Respirology year-in-review 2008: Basic science
Kolb, Martin R. J. and Yang, Ian (2009). Respirology year-in-review 2008: Basic science. Respirology, 14 (3), 318-326. doi: 10.1111/j.1440-1843.2009.01491.x
Chang, Angela T., Haines, Terry, Jackson, Claire, Yang, Ian, Nitz, Jennifer, Low Choy, Nancy and Vicenzino, Bill (2008). Rationale and design of the PRSM study: pulmonary rehabilitation or self management for chronic obstructive pulmonary disease (COPD), what is the best approach. Contemporary Clinical Trials, 29 (5), 796-800. doi: 10.1016/j.cct.2008.04.004
Genetic susceptibility to the respiratory effects of air pollution
Yang, I. A., Fong, K. M., Zimmerman, P. V., Holgate, S. T. and Holloway, J. W. (2008). Genetic susceptibility to the respiratory effects of air pollution. Thorax, 63 (6), 555-563. doi: 10.1136/thx.2007.079426
Systematic review of multidisciplinary teams in the management of lung cancer
Coory, M., Gkolia, P., Yang, I. A., Bowman, R. and Fong, K. (2008). Systematic review of multidisciplinary teams in the management of lung cancer. Lung Cancer, 60 (1), 14-21. doi: 10.1016/j.lungcan.2008.01.008
Interpatient variability in rates of asthma progression: Can genetics provide an answer?
Holloway, John W., Yang, Ian A. and Holgate, Stephen T. (2008). Interpatient variability in rates of asthma progression: Can genetics provide an answer?. Journal of Allergy and Clinical Immunology, 121 (3), 573-579. doi: 10.1016/j.jaci.2008.01.007
Konstantinidis, A. K., Puddicombe, S. M., Mochizuki, A., Sheth, P. D., Yang, Ian Anthony, Yoshisue, H., Wilson, S. J., Davies, D. E., Holgate, S. T. and Holloway, J. W. (2008). Cellular localization of interleukin 13 receptor alpha 2 in human primary bronchial epithelial cells and fibroblasts. Journal of Investigational Allergology and Clinical Immunology, 18 (3), 174-180.
Cheng lu, Meyers, Deborah, Javorsky, George, Bursto, Darryl, Lolekha, Pakorn, Lucas, Margaret, Semmler, Annalese B. T., Savarimuthu, Santiyagu M., Fong, Kwun M., Yang, Ian A., Atherton, John, Galbraith, Andrew J., Parsonage, William A. and Molenaar, Peter (2007). Arg389Gly-beta(1)-adrenergic receptors determine improvement in left ventricular systolic function in nonischemic cardiomyopathy patients with heart failure after chronic treatment with carvedilol. Pharmacogenetics And Genomics, 17 (11), 941-949. doi: 10.1097/FPC.0b013e3282ef7354
Gefitinib for advanced non-small cell lung cancer
Sim, E. H., Yang, I. A., Fong, K., Wood-Baker, R. and Bowman, R. (2007). Gefitinib for advanced non-small cell lung cancer. Cochrane Database of Systematic Reviews, 2018 (4) CD006847. doi: 10.1002/14651858.CD006847
beta(2)-adrenoceptor polymorphisms and obstructive airway diseases: Important issues of study design
Yang, Ian A., Ng, Taria, Molenaar, Peter and Fong, Kwun M. (2007). beta(2)-adrenoceptor polymorphisms and obstructive airway diseases: Important issues of study design. Clinical And Experimental Pharmacology and Physiology, 34 (10), 1029-1036. doi: 10.1111/j.1440-1681.2007.04731.x
Asthma: advancing gene-environment studies
Yang, I. A. and Holloway, J. W. (2007). Asthma: advancing gene-environment studies. Clinical and Experimental Allergy, 37 (9), 1264-1266. doi: 10.1111/j.1365-2222.2007.02798.x
Konstantinidis, A. K., Barton, S. J., Sayers. I., Yang, I. A., Lordan, J. L., Rorke, S., Clough, J. B., Holgate, S. T. and Holloway, J. W. (2007). Genetic association studies of interleukin-13 receptor alpha-1 subunit gene polymorphisms in asthma and atopy. The European Respiratory Journal, 30 (1), 40-47. doi: 10.1183/09031936.00025706
Molenaar, P., Savarimuthu, S. M., Sarsero, D., Chen, L., Semmler, A. B. T., Carle, A., Yang, I., Bartel, S., Vetter, D., Beyerdorfer, I., Krause,E-G. and Kaumann, A. J. (2007). (-)Adrenaline elicits positive inotropic,lusitropic, and biochemical effects through ß2-adrenoceptors in human atrial myocardium from nonfailing and failing hearts, consisten with Gs coupling but not with Gi coupling.. Naunyn-Schmiedeberg's Archives of Pharmocolgy, 375 (1), 11-28. doi: 10.1007/s00210-007-0138-x
Gene expression of lung squamous cell carcinoma reflects mode of lymph node involvement
Larsen, J.E., Pavey, S.J., Bowman, R., Yang, I.A., Clarke, B.E., Colosimo, M.L., Hayward, N.K. and Fong, K.M. (2007). Gene expression of lung squamous cell carcinoma reflects mode of lymph node involvement. The European Respiratory Journal, 30 (1), 21-25. doi: 10.1183/09031936.00161306
Gene-environmental interaction in asthma
Yang, Ian A., Savarimuthu, Santiyagu, Kim, Samuel T., Holloway, John W., Bell, Scott C. and Fong, Kwun M. (2007). Gene-environmental interaction in asthma. Current Opinion in Allergy & Clinical Immunology, 7 (1), 75-82. doi: 10.1097/ACI.0b013e328012ce39
Inhaled corticosteroids for stable chronic obstructive pulmonary disease (Review)
Yang, I. A., Fong, K. M., Sim, E. H. A., Black, P. N. and Lasserson, T. J. (2007). Inhaled corticosteroids for stable chronic obstructive pulmonary disease (Review). Cochrane Database of Systematic Reviews, 2023 (2) CD002991, 1-126. doi: 10.1002/14651858.CD002991.pub2
Bowman, Rayleen V., Yang, Ian A., Semmler, Annalese B. T. and Fong, Kwun M. (2006). Epigenetics of lung cancer. Respirology, 11 (4), 355-365. doi: 10.1111/j.1440-1843.2006.00859.x
The role of toll-like receptors and related receptors of the innate immune system in asthma
Yang, Ian A., Fong, Kwun M., Holgate, Stephen T. and Holloway, John W. (2006). The role of toll-like receptors and related receptors of the innate immune system in asthma. Current Opinion In Allergy and Clinical Immunology, 6 (1), 23-28. doi: 10.1097/01.all.0000200503.77295.bb
Association of asthma with a functional promoter polymorphism in the IL16 gene
Burkart, Kristin M., Barton, Sheila J., Holloway, John W., Yang, Ian A., Cakebread, Julie A., Cruikshank, William, Little, Frederic, Jin, Xiaoyi, Farrier, Lindsay A., Clough, Joanne B., Keith, Tim P., Holgate, Stephen, Center, David M. and O'Connor, George T. (2006). Association of asthma with a functional promoter polymorphism in the IL16 gene. Journal of Allergy And Clinical Immunologyhttp://espace.library.uq.edu.au/workflow/edit_metadata.php?id=234360&wfs_id=778, 117 (1), 86-91. doi: 10.1016/j.jaci.2005.10.011
Larsen, Jill Everland, Colosimo, Maree Louise, Yang, Ian Anthony, Bowman, Rayleen, Zimmerman, Paul Victor and Fong, Kwun Meng (2006). CYP1A1 Ile462Val and MPO G-463A interact to increase risk of adenocarcinoma but not squamous cell carcinoma of the lung. Carcinogenesis, 27 (3), 525-532. doi: 10.1093/carcin/bgi227
Cochrane systematic reviews of treatments for lung cancer
Fong, K. M., Yang, I .A., Zimmerman, P. V. and Bowman, R. V. (2005). Cochrane systematic reviews of treatments for lung cancer. Respiratory Medicine, 99 (9), 1071-1078. doi: 10.1016/j.rmed.2005.05.002
Mucociliary clearance in patients with chronic asthma: effects of beta agonists
Daviskas, Evangelia, Anderson, Sandra D, Shaw, Janet, Eberl, Stefan, Seale, J Paul, Yang, Ian A and Young, Iven H (2005). Mucociliary clearance in patients with chronic asthma: effects of beta agonists. Respirology (Carlton, Vic.), 10 (4), 426-35. doi: 10.1111/j.1440-1843.2005.00738.x
Risk of non-small cell lung cancer and the cytochrome P4501A1 Ile462Val polymorphism
Larsen, Jill Everland, Colosimo, Maree Louise, Yang, Ian Anthony, Bowman, Rayleen, Zimmerman, Paul Victor and Fong, Kwun Meng (2005). Risk of non-small cell lung cancer and the cytochrome P4501A1 Ile462Val polymorphism. Cancer Causes and Control, 16 (5), 579-585. doi: 10.1007/s10552-004-7842-3
Association of tumor necrosis factor-alpha polymorphisms and ozone-induced change in lung function
Yang, Ian A., Holz, Olaf, Jorres, Rudolf A., Magnussen, Helgo, Barton, Sheila J., Rodriguez, Santiago, Cakebread, Julie A., Holloway, John W. and Holgate, Stephen T. (2005). Association of tumor necrosis factor-alpha polymorphisms and ozone-induced change in lung function. American Journal of Respiratory and Critical Care Medicine, 171 (2), 171-176. doi: 10.1164/rccm.200402-194OC
Effectiveness of hospital-based smoking cessation
Fung, Pamela R., Snape-Jenkinson, Stella L., Godfrey, Maureen T., Love, Keith W., Zimmerman, Paul V., Yang, Ian A. and Fong, Kwun M. (2005). Effectiveness of hospital-based smoking cessation. Chest, 128 (1), 216-223. doi: 10.1378/chest.128.1.216
Mucociliary clearance in patients with chronic asthma: Effects of beta(2) agonists
Daviskas, Evangelia, Anderson, Sandra D., Shaw, Janet, Eberl, Stefan, Seale, J. Paul, Yang, Ian A. and Young, Iven H. (2005). Mucociliary clearance in patients with chronic asthma: Effects of beta(2) agonists. Respirology, 10 (4), 426-435. doi: 10.1111/j.1440-1843.2005.00738.x/pdf
Variation in the toll-like receptor 4 gene and susceptibility to myocardial infarction
Holloway, John, Yang, Ian and Ye, Shu (2005). Variation in the toll-like receptor 4 gene and susceptibility to myocardial infarction. Pharmacogenetics and Genomics, 15 (1), 15-21.
β2-Adrenergic receptor polymorphism and asthma: True or false?
Holloway, J. W. and Yang, I. A. (2005). β2-Adrenergic receptor polymorphism and asthma: True or false?. Journal of Allergy And Clinical Immunology, 115 (5), 960-962. doi: 10.1016/j.jaci.2005.02.005
Cytokine gene polymorphisms in idiopathic pulmonary fibrosis
Riha, R.L., Yang, I.A., Rabnott, G.C., Tunnicliffe, A.M., Fong, K.M. and Zimmerman, P.V. (2004). Cytokine gene polymorphisms in idiopathic pulmonary fibrosis. Internal Medicine Journal, 34 (3), 126-129. doi: 10.1111/j.1444-0903.2004.00503.x
TLR4 Asp299Gly polymorphism is not associated with coronary artery stenosis (vol 170, pg 187, 2003)
Yang, I.A., Holloway, J.W. and Ye, S. (2004). TLR4 Asp299Gly polymorphism is not associated with coronary artery stenosis (vol 170, pg 187, 2003). Atherosclerosis, 173 (1), 155-155. doi: 10.1016/j.atherosclerosis.2003.11.001
Yang, IA, Holgate, ST and Holloway, JW (2004). Toll-like receptor polymorphisms and allergic disease: interpreting the evidence from genetic studies. CLINICAL AND EXPERIMENTAL ALLERGY, 34 (2), 163-166. doi: 10.1111/j.1365-2222.2004.01893.x
Kedda, MA, Shi, J, Duffy, D, Phelps, S, Yang, I, O'Hara, K, Fong, K and Thompson, PJ (2004). Characterization of two polymorphisms in the leukotriene C4 synthase gene in an Australian population of subjects with mild, moderate, and severe asthma. Journal of Allergy & Clinical Immunology, 113 (5), 889-895. doi: 10.1016/j.jaci.2004.02.008
Toll-like receptor 4 polymorphism and severity of atopy in asthmatics
Yang, IA, Barton, SJ, Rorke, S, Cakebread, JA, Keith, TP, Clough, JB, Holgate, ST and Holloway, JW (2004). Toll-like receptor 4 polymorphism and severity of atopy in asthmatics. Genes And Immunity, 5 (1), 41-45. doi: 10.1038/sj.gene.6364037
Yang, I. A., Holgate, S. T. and Holloway, J. W. (2004). Toll-like receptor polymorphisms and allergic disease: interpreting the evidence from genetic studies. Clinical & Experimental Allergy, 34 (2), 163-166. doi: 10.1111/j.1365-2222.2004.01893.x
Mannose-binding lectin gene polymorphism predicts hospital admissions for COPD infections
Yang, I. A., Seeney, S. L., Wolter, J. M., Anders, E. M., McCormack, J. G., Tunnicliffe, A. M., Rabnott, G. C., Shaw, J. G., Dent, A. G., Kim, S. T., Zimmerman, P. V. and Fong, K. M. (2003). Mannose-binding lectin gene polymorphism predicts hospital admissions for COPD infections. Genes & Immunity, 4 (4), 269-274. doi: 10.1038/sj.gene.6363961
Sarsero, Doreen, Russell, Fraser D., Lynham, James A., Rabnott, Glenn, Yang, Ian, Fong, Kwun M., Li, Li, Kaumann, Alberto J. and Molenaar, Peter (2003). (-)-CGP 12177 increases contractile force and hastens relaxation of human myocardial preparations through a propranolol-resistant state of the beta1-adrenoceptor. Naunyn-Schmiedeberg's Archives of Pharmacology, 367 (1), 10-21. doi: 10.1007/s00210-002-0652-9
Polymorphisms in Toll-like receptor 4 and the systemic inflammatory response syndrome
Child, NJA, Yang, IA, Pulletz, MCK, de Courcy-Golder, K, Andrews, AL, Pappachan, VJ and Holloway, JW (2003). Polymorphisms in Toll-like receptor 4 and the systemic inflammatory response syndrome. Biochemical Society Transactions, 31 (3), 652-653. doi: 10.1042/BST0310652
TLR4 Asp299Gly polymorphism is not associated with coronary artery stenosis
Yang, Ian A., Holloway, John W. and Ye, Shu (2003). TLR4 Asp299Gly polymorphism is not associated with coronary artery stenosis. Atherosclerosis, 170 (1), 187-190. doi: 10.1016/S0021-9150(03)00286-7
Molenaar, P., Rabnott, G., Yang, I., Fong, K. M., Savarimuthu, S. M., Li, L., West, M. J. and Russell, F. D. (2002). Conservation of the cardiostimulant effects of (-)-Norepinephrine across Ser49Gly and Gly389Arg Beta1-adrenergic receptor polymorphisms in human right atrium in vitro. Journal of The American College of Cardiology, 40 (7), 1275-1282. doi: 10.1016/S0735-1097(02)02137-X
Trepopnoea due to positional narrowing of the left main bronchus
Yang, I.A., Bell, S.C., Fong, K.M. and Aldons, P.M. (1999). Trepopnoea due to positional narrowing of the left main bronchus. Australian and New Zealand Journal of Medicine, 29 (6), 838-839. doi: 10.1111/j.1445-5994.1999.tb00800.x
Hai Ngo, Linh Thi, Woodman, Richard, Denman, Russell A., Walters, Tomos E., Yang, Ian and Ranasinghe, Isuru (2021). Long-term outcomes of patients undergoing catheter ablation of atrial fibrillation: A bi-national cohort study. Heart Rhythm 2021, Boston, MA United States, 28-31July 2021. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.hrthm.2021.06.336
Ngo, L., Woodman, R., Denman, R., Walters, T., Yang, I. and Ranasinghe, I. (2021). Long-term Outcomes of 265,677 patients hospitalised with Atrial Fibrillation and Flutter From 2008 to 2015. 69th CSANZ Annual Scientific Meeting 43rd Annual Scientific Meeting of the International Society for Heart Research ANZET 21, Online, 5-8 August 2021. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.hlc.2021.06.154
Ngo, L., Woodman, R., Denman, R., Walters, T., Yang, I. and Ranasinghe, I. (2021). Long-term Outcomes of Patients Undergoing Catheter Ablation of Atrial Fibrillation: A Bi-National Cohort Study. 69th CSANZ Annual Scientific Meeting 43rd Annual Scientific Meeting of the International Society for Heart Research ANZET 21, Online, 5-8 August 2021. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.hlc.2021.06.155
Attitudes of Australian specialists to lung cancer screening with low dose computed tomography
Marshall, H., Mclellan, R., Yang, I., Bowman, R. and Fong, K. (2020). Attitudes of Australian specialists to lung cancer screening with low dose computed tomography. Australia & New Zealand Society of Respiratory Science and The Thoracic Society of Australia and New Zealand (ANZSRS/TSANZ) Annual Scientific Meeting for Leaders in Lung Health & Respiratory Science, Melbourne, VIC, Australia, 27–31 March 2020. Richmond, VIC, Australia: Wiley-Blackwell.
Azithromycin add-on therapy reduces airway inflammation and extracellular DNA: An AMAZES sub-study
Simpson, Jodie, Barker, Daniel, Yang, Ian, Upham, John, Reynolds, Paul, Hodge, Sandra, James, Alan, Jenkins, Christine, Peters, Matthew, Marks, Guy, Baraket, Melissa and Gibson, Peter (2019). Azithromycin add-on therapy reduces airway inflammation and extracellular DNA: An AMAZES sub-study. European-Respiratory-Society (ERS) International Congress, Madrid, Spain, 28 September-2 October 2019. Sheffield, United Kingdom: European Respiratory Society. doi: 10.1183/13993003.congress-2019.OA5338
A meta-analysis of the effectiveness of smart phone applications to aid smoking cessation
Barnett, Adrian, Yang, Ian, Hay, Karen, Ding, Hang, Bowman, Rayleen, Fong, Kwun and Marshall, Henry (2019). A meta-analysis of the effectiveness of smart phone applications to aid smoking cessation. European-Respiratory-Society (ERS) International Congress, Madrid Spain, 28 September-2 October 2019. London, United Kingdom: European Respiratory Society. doi: 10.1183/13993003.congress-2019.OA5134
Chee, T. M., Oey, H., Fong, K., Yang, I., Krause, L. and Bowman, R. (2019). Fusion genes identified from whole genome and whole transcriptome sequencing of malignant pleural mesothelioma tumours. IASLC 2019 World Conference on Lung Cancer, Barcelona, Spain, 7-10 September 2019. New York, NY, United States: Elsevier . doi: 10.1016/j.jtho.2019.08.697
Association between bacterial load and inflammatory gene expression in COPD exacerbations
O'Farrell, Hannah, Shaw, Janet, Bowman, Rayleen, Fong, Kwun and Yang, Ian (2018). Association between bacterial load and inflammatory gene expression in COPD exacerbations. 28th International Congress of the European-Respiratory-Society (ERS), Paris, France, 15-19 September 2018. Lausanne, Switzerland: European Respiratory Society. doi: 10.1183/13993003.congress-2018.PA3864
Management of acute COPD exacerbations: Do we follow the guidelines?
Cousins, J., Wood-Baker, R., Wark, P., Yang, I., Hutchinson, A., Sajkov, D., Gibson, P. and Mcdonald, V. (2018). Management of acute COPD exacerbations: Do we follow the guidelines?. The Australia & New Zealand Society of Respiratory Science and The Thoracic Society of Australia and New Zealand (ANZSRS/TSANZ) Annual Scientific Meeting, Adelaide, Australia, 23–27 March 2018. Hoboken, NJ United States: Wiley.
Primary human bronchial epithelial cell responses to diesel and novel biodiesel emissions
Vaughan, Annalicia, Stevanovic, Svetlana, Jafari, Mohammad, Bowman, Rayleen, Fong, Kwun, Ristovski, Zoran and Yang, Ian (2018). Primary human bronchial epithelial cell responses to diesel and novel biodiesel emissions. 28th International Congress of the European Respiratory Society (ERS), Paris, France, 15-19 September 2018. Lausanne, Switzerland: European Respiratory Society. doi: 10.1183/13993003.congress-2018.PA4243
Sputum biospecimen quality and suitability for microbiome characterisation in COPD
Shaw, Janet, O'Farrell, Hannah, Ferry, Olivia, Fung, Pamela, Courtney, Deborah, Bowman, Rayleen, Fong, Kwun and Yang, Ian (2018). Sputum biospecimen quality and suitability for microbiome characterisation in COPD. 28th International Congress of the European-Respiratory-Society (ERS), Paris, France, 15-19 September 2018. Lausanne, Switzerland: European Respiratory Society. doi: 10.1183/13993003.congress-2018.PA5304
Vaughan, Annalicia, Stevanovic, Svetlana, Jafari, Mohammad, Miljevic, Branka, Ristovski, Zoran, Bowman, Rayleen, Fong, Kwun and Yang, Ian (2017). Effects of N-acetylcysteine intervention in vitro on primary human bronchial epithelial cells exposed to diesel emissions. ANZSRS/TSANZ, Canberra, ACT, Australia, 24-28 March 2017. Richmond, VIC, Australia: Wiley-Blackwell.
Gibson, P., Reddel, H., Jenkins, C., Marks, G., Upham, J., Gillman, A., Thien, F., Sutherland, M., Rimmer, J., Katsoulotos, G., Cook, M., Yang, , Katelaris, C., Bowler, S., Langton, D., Robinson, P., Wright, C., Yozghatlian, , Burgess, S., Mcdonald, , Sivakumaran, P., Jaffe, A., Bowden, J., Guo, M., Wark, P., Yan, K. Y., Kritikos, V., Peters, M., Baraket, M. ... Bint, M. (2016). EFFECTIVENESS AND RESPONSE PREDICTORS OF OMALIZUMAB IN A SEVERE ALLERGIC ASTHMA POPULATION WITH A HIGH PREVALENCE OF COMORBIDITIES: THE AUSTRALIAN XOLAIR REGISTRY. HOBOKEN: WILEY-BLACKWELL.
Intratumoral genomic heterogeneity of primary pulmonary adenocarcinoma in never smokers
Daniels, Marissa G., Krause, Lutz, Ellis, Jonathan J., Yang, Ian A., Bowman, Rayleen V., Relan, Vandana, Chee, Kelly, Goh, Felicia, Parris, Brielle, Morrison, Leanne, Martins, Maria, Passmore, Linda, McCaul, Elizabeth, Courtney, Deborah, Duhig, Edwina, Windsor, Morgan, Naidoo, Rishendran and Fong, Kwun M. (2016). Intratumoral genomic heterogeneity of primary pulmonary adenocarcinoma in never smokers. Meeting of the American-Association-for-Cancer-Research (AACR) Precision Medicine Series - Integrating Clinical Genomics and Cancer Therapy, Salt Lake City, UT United States, 13-16 June 2015. Philadelphia, PA United States: Elsevier. doi: 10.1158/1557-3265.PMSCLINGEN15-24
Electronic nose as a tool for detecting COPD and emphysema in smokers
Dent, A., Bowman, R., Zimmerman, P., Fong, K. and Yang, I. (2015). Electronic nose as a tool for detecting COPD and emphysema in smokers. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science, Annual Scientific Meeting, Gold Coast, QLD, Australia, 27 March–1 April 2015. Richmond, VIC, Australia: Wiley-Blackwell.
Inter-, and Intratumoural Genomic Heterogeneity of Primary Pulmonary Adenocarcinoma in Never Smokers
Daniels, Marissa, Krause, Lutz, Ellis, Jonathan, Yang, Ian A., Bowman, Rayleen V., Relan, Vandana, Chee, Kelly, Goh, Felicia, Parris, Brielle, Morrison, Leanne, Martins, Maria, Mccaul, Elizabeth, Passmore, Linda, Courtney, Deborah, Duhig, Edwina, Naidoo, Rishendran, Fong, Kwun and Windsor, Morgan (2015). Inter-, and Intratumoural Genomic Heterogeneity of Primary Pulmonary Adenocarcinoma in Never Smokers. 16th World Conference on Cancer, Denver, CO United States, 6-9 September 2015. New York, NY United States: Elsevier.
Vaughan, A., Stevanovic, S., Morrison, L., Pourkhesalian, A., Rahman, M., Zare, A., Miljevic, B., Ristovski, Z., Goh, F., Relan, V, Bowman, R., Fong, K. and Yang, I (2015). Organic content of diesel emission particles and human bronchial epithelial cell responses to primary and aged diesel emissions. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science, Annual Scientific Meeting 2015, Gold Coast, Australia, 27 March – 1 April 2015. HOBOKEN: WILEY-BLACKWELL. doi: 10.1111/resp.12495_3
Comprehensive Geriatric Assessment (CGA) and short term outcomes in frail older respiratory patients
Hsiao, A., Kennett, C., Eeles, E., Whiting, E., Rowland, J., Fung, P., McNamara, J., Shaw, J., Ingham, J., Bowman, R., Fong, K. and Yang, I. (2014). Comprehensive Geriatric Assessment (CGA) and short term outcomes in frail older respiratory patients. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2014 Annual Scientific Meetings, Adelaide, Australia, 4‐9 April 2014. Richmond, VIC, Australia: Wiley-Blackwell.
Vaughan, A., Stevanovic, S., Miljevic, B., Ristovski, Z., Relan, V., Goh, F., Bowman, R., Fong, K. and Yang, I. (2014). Diesel emission composition mediates cellular responses of primary human bronchial epithelial cells at an air-liquid interface in vitro. Thoracic Society of Australia and New Zealand Annual Scientific Meeting, Adelaide, Australia, 4-9 April 2014. Richmond, VIC, Australia: Wiley-Blackwell.
Drug resistant gene expression changes in carboplatin tolerant mesothelioma cells
Relan, V., Morrison, L., Chee, T., Yang, I., Fong, K. and Bowman, R. (2014). Drug resistant gene expression changes in carboplatin tolerant mesothelioma cells. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2014 Annual Scientific Meetings, Adelaide, Australia, 4‐9 April 2014. Richmond, VIC, Australia: Wiley-Blackwell.
Outpatient physiotherapy improves quality of life for non CF bronchiectasis
Hall, K., Kuys, S., Masel, P., Fong, K. and Yang, I. (2014). Outpatient physiotherapy improves quality of life for non CF bronchiectasis. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2014 Annual Scientific Meetings, Adelaide, Australia, 4-9 April 2014. New York, NY, United States: Elsevier.
Transcriptional regulation of SPAG6 by DNA methylation in NSCLCs
Altenberger, Corinna, Heller, Gerwin, Schmid, Bianca, Ziegler, Barbara, Muellauer, Leonhard, Lang, Gyoergy, End-Pfuetzenreuter, Adelheid, Doeme, Balazs, Arns, Britt-Madeleine, Fong, Kwun M., Wright, Casey M., Yang, Ian A., Klepetko, Walter, Zielinski, Christoph C. and Zoechbauer-Mueller, Sabine (2014). Transcriptional regulation of SPAG6 by DNA methylation in NSCLCs. 105th Annual Meeting of the American Association for Cancer Research (AACR), San Diego, CA United States, 05-09 April 2014. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.AM2014-397
Alternatives to Induced Sputum for Identifying Patients with Eosinophilic Asthma
Simpson, J. L., Yang, I. A., Reynolds, P. N., Hodge, S. J., James, A. L., Upham, J., Jenkins, C., Peters, M. and Gibson, P. G. (2013). Alternatives to Induced Sputum for Identifying Patients with Eosinophilic Asthma. 2013 Annual Scientific Meetings of The Thoracic Society of Australia and New Zealand and the Australian and New Zealand Society of Respiratory Science, Darwin, NT Australia, 22 - 27 March 2013. Richmond, VIC Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/resp.12046
Comparative effectiveness of DDPCR for the detection of EGFR mutations
Daniels, Marissa, Sriram, Krishna, Duhig, Edwina, Clarke, Belinda, Dettrick, Andrew, Godbolt, David, Tran, Kayla, Windsor, Morgan, Naidoo, Rishendran, Matar, Kevin, Tam, Robert, Bowman, Rayleen, Yang, Ian and Fong, Kwun (2013). Comparative effectiveness of DDPCR for the detection of EGFR mutations. *, *, *. New York, NY, United States: Elsevier.
Goh, Felicia, Duhig, Edwina, Clarke, Belinda, Dettrick, Andrew, Godbolt, David, Tran, Kayla, Franz, Louise, Barr, Jeremy, Parsonson, Kylie, Martins, Maria, Davidson, Morgan, Wright, Casey, De laat, John, Shaw, Janet, Martin, Jennifer, Parris, Brielle, Shaw, Eloise, De Souza, Laura, Tjahjadi, Jane, Daniels, Marissa, Larsen, Jill E., Semmler, Annalese, Stockwell, Rachel, Savarimuthu, Santiyagu, Relan, Vandana, Sriram, Krishna, Campbell, Jennifer, Kim, Samuel, Tan, Maxine ... Fong, Kwun (2013). Heterogeneity in tumour content and necrosis in primary lung cancers: Implications for molecular analysis. 15th World Conference on Lung Cancer, Sydney, Australia, October 27-30, 2013. New York, United States: Elsevier. doi: 10.1097/01.JTO.0000438438.14562.c8
Personalized care for COPD: the "COPD Snapshot"
Hakim, R., Mccarthy, L., Masel, P. J., Bowman, R. V., Burke, A., Bazdar, S., Serginson, J. G. and Yang, I. A. (2013). Personalized care for COPD: the "COPD Snapshot". Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2013 Annual Scientific Meetings, Darwin, NT, Australia, 22-27 March 2013. Richmond, VIC, Australia: Wiley-Blackwell Publishing. doi: 10.1111/resp.12045
Lee, Xiang-Wen, Leong, Steven, Marshall, Henry, Ayres, Jonny, Mohamed, Osman, Bowman, Rayleen, Yang, Ian and Fong, Kwun (2013). Pulmonary Nodule Detection by Junior Medical Staff Is Improved by Digital Tomosynthesis Compared to Chest X-Ray. 15th World Congress on Lung Cancer, Sydney, NSW Australia, 27-30 October 2013. Philadelphia, PA United States: Elsevier.
Dent, Annette G., Bowman, Rayleen, Zimmerman, Paul, Yang, Ian A. and Fong, Kwun M. (2013). Validation of electronic nose exhaled breath VOC profile in discriminating between subjects with early stage lung cancer and healthy never smokers. New York, NY, United States: Elsevier.
O'Hare, P. E., Ayres, J., O'Rourke, R., Slaughter, R. E., Marshall, H. M., Bowman, R. V., Fong, K. M. and Yang, I. A. (2013). Visual Coronary Artery Calcification Score On Thoracic Ct Predicts All-Cause Mortality in Patients with Copd. 2013 Annual Scientific Meetings of The Thoracic Society of Australia and New Zealand and the Australian and New Zealand Society of Respiratory Science, Darwin, NT Australia, 22 - 27 March 2013. Richmond, VIC Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/resp.12045
An evidence-based checklist for acute exacerbations of chronic obstructive pulmonary disease
Goddard, John R., Serginson, John, Mccarthy, Lisa, Waller, Rina, Bowman, Rayleen V., Fong, Kwun M. and Yang, Ian A. (2012). An evidence-based checklist for acute exacerbations of chronic obstructive pulmonary disease. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2012 Annual Scientific Meetings, Canberra, ACT, 30 March - 4 April 2012. Richmond, VIC, Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2012.02142.x
Relan, V., Schagen, J., Morrison, L., Martins, J., Clarke, B. E., Duhig, E. E., Yang, I. A., Fong, K. M. and Bowman, R. V. (2012). Discovery of new active drugs for treatment of malignant mesothelioma by screening the JHCCL clinical compound library. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2012 Annual Scientific Meetings, Canberra ACT, Australia, 30 March-4 April 2012. Richmond Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2012.02143.x
Inflammatory subtypes of uncontrolled asthma in Australia
Garside, C. G., Simpson, J. L., Yang, I. A., Reynolds, P. N., Hodge, S. J., James, A. L., Upham, J., Gibson, P. G. and Amazes Study Research Group (2012). Inflammatory subtypes of uncontrolled asthma in Australia. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2012 Annual Scientific Meetings, Canberra, ACT, 30 March - 4 April 2012. Richmond, VIC, Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2012.02142.x
Duhig, E. E., Clarke, B. E., Godbolt, D., Dettrick, A., Pauli, J., Yang, I. A., Bowman, R., V and Fong, K. M. (2012). Interobserver agreement of lung adenocarcinoma diagnosis when applying the 2011 Iaslc/ats/ers Multidisciplinary Classification of Lung Adenocarcinoma. 4th Australian Lung Cancer Conference (ALCC), Adelaide SA, Australia, 23-25 August 2012. Philadelphia, PA United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Sriram, K. B., Relan, V, Clarke, B. E., Duhig, E. E., Windsor, M. N., Matar, K. S., Naidoo, R., Passmore, L., McCaul, E., Courtney, D., Yang, I. A., Bowman, R., V and Fong, K. M. (2012). Pleural fluid cell-free dna integrity index and mesothelin to identify cytologically negative malignant pleural effusions including mesotheliomas. 4th Australian Lung Cancer Conference (ALCC), Adelaide SA, Australia, 23-25 August 2012. Philadelphia, PA United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Fong, K., Marshall, H., Bowman, R., Yang, I., Slaughter, R., Fuentes, M., Crossin, J., Leong, S., Ayres, J., Windsor, M., Redmond, S., McCaul, L., Passmore, L. and Zimmerman, P. (2012). Screening for lung cancer. RACP Future Directions in Health Congress 2012, Brisbane QLD, Australia, 6-9 May 2012. Richmond Vic., Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1445-5994.2012.02779.x
Screening lung Tumour tissue for whole genome sequencing
Goh, F., Daniels, M., Shaw, J. G., Courtney, D., Passmore, L., McCaul, L., Duhig, E., Clarke, B., Parsonson, K., Brady, J., Butler, D., Martins, M., Davidson, M., Wright, C. M., Martin, J., Morrison, L., Relan, V, Savarimuthu, F. S. M., Windsor, M. N., Matar, K. S., Naidoo, R., Tam, R., Colosimo, M., Yang, I. A., Bowman, R., V and Fong, K. M. (2012). Screening lung Tumour tissue for whole genome sequencing. 4th Australian Lung Cancer Conference (ALCC), Adelaide, SA, Australia, 23-25 August 2012. Philadelphia, PA, United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Telomere length in pleural fluid is not different between malignant and benign effusions
Sriram, K. B., Relan, V, Clarke, B. E., Duhig, E. E., Windsor, M. N., Matar, K. S., Naidoo, R., Passmore, L., McCaul, E., Courtney, D., Yang, I. A., Bowman, R., V and Fong, K. M. (2012). Telomere length in pleural fluid is not different between malignant and benign effusions. 4th Australian Lung Cancer Conference (ALCC), Adelaide SA, Australia, 23-25 August 2012. Philadelphia, PA United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Marshall, H. M., Bowman, R., V, Crossin, J., Lau, M. A., Slaughter, R. E., Ayres, J., Passmore, L. H., McCaul, E. M., Leong, S. C., Courtney, D. A., Windsor, M. N., Yang, I. A., Zimmerman, P., V., Hayes, T. J., Redmond, S. J., Lam, S. C., Tammemagi, M. C. and Fong, K. M. (2012). The Queensland Lung Cancer Screening Study: risk stratification using participant data and lung function tests can significantly increase screening effectiveness. 4th Australian Lung Cancer Conference (ALCC), Adelaide SA, Australia, 23-25 August 2012. Philadelphia, PA United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Duhig, E. E., Clarke, B. E., Godbolt, D., Dettrick, A., Pauli, J., Yang, I. A., Bowman, R., V and Fong, K. M. (2012). The application of Fuhrman Nuclear Grade to lung adenocarcinoma and correlation with the Iaslc/ats/ers Multidisciplinary Classification of Adenocarcinoma and Survival in stage 1 disease. 4th Australian Lung Cancer Conference (ALCC), Adelaide SA, Australia, 23-25 August 2012. Philadelphia, PA United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Duhig, E. E., Clarke, B. E., Godbolt, D., Dettrick, A., Pauli, J., Yang, I. A., Bowman, R., V and Fong, K. M. (2012). The application of mitotic activity and necrosis to lung adenocarcinoma and correlation with the Iaslc/ats/ers multidisciplinary classification of adenocarcinoma in stage 1 disease. 4th Australian Lung Cancer Conference (ALCC), Adelaide SA, Australia, 23-25 August 2012. Philadelphia, PA United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Shaw, E., Wright, C., Bowman, R., V, Yang, I. A., Duhig, E., Clarke, L. and Fong, K. M. (2012). The expression of epithelial mesenchymal transition markers in early stage non-small cell lung cancer. 4th Australian Lung Cancer Conference (ALCC), Adelaide, SA, Australia, 23-25 August 2012. Philadelphia, PA United States: Lippincott Williams and Wilkins. doi: 10.1097/JTO.0b013e318268ff90
Mackintosh, John A., Marshall, Henry M., Yang, Ian A., Bowman, Rayleen V. and Fong, Kwun M. (2012). Volume doubling time of non-small cell lung cancer: Relationships to tumour and patient characteristics. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2012 Annual Scientific Meetings, Canberra, ACT, 30 March - 4 April 2012. Richmond, VIC, Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2012.02142.x
Sriram, K. B., Larsen, J. E., Francis, S. M. S., Wright, C. M., Mattar, K., Windsor, M., Clarke, B. E., Duhig, E. E., Hayward, N. K., Bowman, R. V., Yang, I. A. and Fong, K. M. (2011). Array-comparative genomic hybridization identifies novel copy number alterations in recurrent squamous cell lung cancer. 3rd Australian Lung Cancer Conference (ALCC), Melbourne VIC, Australia, 6-8 October 2011. Philadelphia, PA, United States: Lippincott Willams & Wilkins.
Discovery of Active New Drugs in Malignant Mesothelioma
Relan, V., Schagen, J., Morrison, L., Parsonson, K. P., Clarke, B. E., Duhig, E. E., Yang, I. A., Fong, K. M. and Bowman, R. V. (2011). Discovery of Active New Drugs in Malignant Mesothelioma. European Multidisciplinary Cancer Congress on Integrating Basic and Translational Science, Surgery, Radiotherapy, Medical Oncology, Advocacy and Care (2011), Stockholm, Sweden, 23-27 September 2011. OXFORD: ELSEVIER SCI LTD. doi: 10.1016/S0959-8049(11)70811-5
Electronic nose distinguishes lung cancer from healthly smoking controls
Dent, A., Bowman, R., Zimmerman, P, Yang, I. and Fong, K. (2011). Electronic nose distinguishes lung cancer from healthly smoking controls. 3rd Australian Lung Cancer Conference (ALCC), Melbourne, Australia, 6-9 October 2010. Philadelphia PA, United States: Lippincott Williams & Wilkins.
Evaluation of EGFR mutations in NSCLC using ME-PCR and HRM
Sriram, K. B., Tan, M. E., Savarimuthu Francis, S. M., Wright, C. M., Relan, V., Martins, M. U., Bowman, R. V., Yang, I. A. and Fong, K. M. (2011). Evaluation of EGFR mutations in NSCLC using ME-PCR and HRM. 3rd Australian Lung Cancer Conference (ALCC), Melbourne VIC, Australia, 6-8 October 2011. Philadelphia PA, United States: Lippincott Willams & Wilkins. doi: 10.1097/01.JTO.0000394634.73009.dc
Genetic changes in two cell lines from human malignant mesothelioma during long term culturing
Relan, V., Quinn, K. R., Wright, C. M., Savarimuthu, S. M., Tan, M. E., Clarke, B. E., Duhig, E. E., Yang, I. A., Fong, K. M. and Bowman, R. V. (2011). Genetic changes in two cell lines from human malignant mesothelioma during long term culturing. 3rd Australian Lung Cancer Conference (ALCC), Melbourne, Australia, 6-9 October 2010. Philadelphia PA, United States: Lippincott Williams & Wilkins.
Improving lung cancer specific outcome when access is the key-are we there yet?
Lwin, Zarnie, Day, Heather, Baade, Peter D., Aitken, Joanne F., Yang, Ian A., Bowman, Rayleen and Fong, Kwun M. (2011). Improving lung cancer specific outcome when access is the key-are we there yet?. In: , , (S1390-S1391). .
Mapping the lung cancer methylome
Wright, C. M., Francis, S. M. S., Sriram, K. B., Quinn, K. R., Stark, M. S., Hayward, N. K., Yang, I. A., Bowman, R. V. and Fong, K. M. (2011). Mapping the lung cancer methylome. 3rd Australian Lung Cancer Conference (ALCC), Melbourne VIC, Australia, 6-9 October 2010. Philadelphia PA, United States: Lippincott Williams & Wilkins.
Merkel cell polyoma virus in lung cancer
Relan, V., Bowman, R. V., Yang, I. A. and Fong, K. M. (2011). Merkel cell polyoma virus in lung cancer. 3rd Australian Lung Cancer Conference (ALCC), Melbourne VIC, Australia, 6-8 October 2011. Philadelphia PA, United States: Lippincott Willams & Wilkins. doi: 10.1097/01.JTO.0000394634.73009.dc
Thomas, J. D., Mohammed, O., Slaughter, R. E., Feuntes, M., Crossin, J., Marshall, H., Wright, C. M., Martins, M. U., Tan, M. E., Yang, I. A., Fong, K. M. and Bowman, R. V. (2011). Relationships between pleural plaques, lung asbestos content and asbestos exposure in Australians with or at risk of lung cancer. 3rd Australian Lung Cancer Conference (ALCC), Melbourne, Australia, 6-9 October 2010. Philadelphia PA, United States: Lippincott Williams & Wilkins. doi: 10.1097/01.JTO.0000394634.73009.dc
Systematic quantification of tumour content in cryopreserved samples stored in a lung tumour bank
Duhig, Edwina, Clarke, Belinda, Martins, Maria, Goh, Felicia, Yang, Ian, Matar, Kevin, Windsor, Morgan, Zimmerman, Paul, Davidson, Morgan, Wright, Casey, Bowman, Rayleen and Fong, Kwun M. (2011). Systematic quantification of tumour content in cryopreserved samples stored in a lung tumour bank. *, *, *. Philadelphia, PA, United States: Lippincott Williams & Wilkins.
The lung cancer journey - a review from the prince charles hospital pulmonary malignancy unit
Rassam, L. J., Sinhal, N. P., Mackenzie, H., Bowman, R. V., Fong, K. M., Yang, I. A., Pratt, G., Fay, M., Hughes, B., Windsor, M. F. and Matar, K. (2011). The lung cancer journey - a review from the prince charles hospital pulmonary malignancy unit. 3rd Australian Lung Cancer Conference (ALCC), Melbourne VIC, Australia, 6-8 October 2011. Philadelphia PA, United States: Lippincott Willams & Wilkins. doi: 10.1097/01.JTO.0000394634.73009.dc
Banking of tissues and body fluids for translational lung research
Martins, M. U., Quinn, K. R., Savarimuthu Francis, S. M., Wright, C. M., Tan, M. E., Passmore, L. H., McCaul, E., Relan, V., Sriram, K. B., Davidson, M. R., De Laat, J. A., Parris, B. A., Campbell, J., Shaw, E. F., Tjahjadi, J., Hunter, S. C., Larsen, J. E., Clarke, B. E., Duhig, E. E., Zimmerman, P. V., Yang, I. A., Bowman, R. V. and Fong, K. M. (2010). Banking of tissues and body fluids for translational lung research. The Thoracic Society of Australia & New Zealand (TSANZ) Annual Scientific Meeting 2010, Brisbane, Qld, Australia, 19-24 March, 2010. Carlton, VIC, Australia: Blackwell Science. doi: 10.1111/j.1440-1843.2010.01736.x
COMMON PATHOGENETIC MECHANISMS OF COPD AND LUNG CANCER
Yang, I (2010). COMMON PATHOGENETIC MECHANISMS OF COPD AND LUNG CANCER. 15th Congress of the Asian Pacific Society of Respirology, Manila, Philippines, 22-25 November 2010.
Characterization of cell lines from human malignant mesothelioma
Relan, V., Quinn, K. R., Tan, M. E., Wright, C. W., Clarke, B. E., Duhig, E. E., Yang, I. A., Fong, K. M. and Bowman, R. V. (2010). Characterization of cell lines from human malignant mesothelioma. The Thoracic Society of Australia & New Zealand (TSANZ) Annual Scientific Meeting 2010, Brisbane, Australia, 19-24 March 2010. Richmond, Vic., Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2010.01736.x
Genetic changes in cell lines from human malignant mesothelioma during long term culturing
Relan, V., Quinn, K. R., Wright, C. M., Savarimuthu, S. M., Tan, M. E., Clarke, B. E., Duhig, E. E., Yang, I. A., Fong, K. M. and Bowman, R. V. (2010). Genetic changes in cell lines from human malignant mesothelioma during long term culturing. Brisbane 2010: The Joint TSANZ & ANZSRS Annual Scientific Meetings, Brisbane, QLD, Australia, 19–24 March 2010. Richmond, VIC, Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2010.01736.x
Yang, Ian A., Swadling, Barbara, Bradbear, Robyn, Hatfield, Laurel, Stride, Peter J.O., Livett, Mark, Wright, Morgan, Baker, Peter G., Lake, Fiona, Caputo, Lisa, Peterson, Ray, McAllister, Lindy and Eley, Diann (2010). Learning in the Clinical Setting (LICS): A pilot study at the Northside Clinical School and Rural Clinical School. Medical Education Teaching and Learning Conference, Herston, Brisbane, Australia, 5 November 2010.
Practical Implementation of COPD Guidelines in the Asia-Pacific region: Consensus formation
Yang, Ian (2010). Practical Implementation of COPD Guidelines in the Asia-Pacific region: Consensus formation. Post Graduate Course 15th Congress of the APSR, Manila, Philippines, 22-25 November 2010.
Chen, L., Meyers, D., Semmler, A.B., Yang, I., Pakorn, L., Lucas, M., Jovarsky, G., Savarimuthu, S., Galbraith, A., Parsonage, W. and Molenaar, P. (2006). Beta1-adrenoceptor (AR) Arg389Gly polymorphisms affect responses to carvedilol in patients with idiopathic dilated cardiomyopathy. 15th World Congress of Pharmacology, Beijing, China, 2nd - 7th July, 2006. China: Chinese Pharmacological Society.
Molenaar, P., Chen, Lu, Meyers, E., Javorsky, G., Burstow, M., Lucas, P., Lolekha, J., Atherton, A., Semmler, A. B., Savarimuthu, S., Fong, K. M., Yang, I. A., Galbraith, A. and Parsonage, W. A. (2006). Carvedilol causes a greater increase in heart function in idiopathic dilated cardiomyopathy patients with ARG389-compared to GLY389 Beta1-adrenoceptors. The Australian Health and Medical Research Congress, Melbourn, Australia, 26th November - 1st December, 2006. Australia: Australian Govenment NHMRC.
Antibiotics for acute exacerbations of COPD: A systematic review
Yang, I. A., Kim, S. T. and Bell, S. C. (2005). Antibiotics for acute exacerbations of COPD: A systematic review. 2005 Annual Scientific Meeting The Thoracic Society of Australia and New Zealand, Perth, Australia, 18-23 March, 2005. Carlton South, Victoria: Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2005.00663.x-i1
Antibiotics in cystic fibrosis (CF): A systematic review
Kim, S. T., Yang, I. A. and Bell, S. C. (2005). Antibiotics in cystic fibrosis (CF): A systematic review. 2005 Annual Scientific Meeting The Thoracic Society of Australia and New Zealand, Perth, Australia, 18-23 March, 2005. Carlton South, Victoria: Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2005.00663.x-i1
Antibiotics in cystic fibrosis (CF): A systematic review
Kim, S. T., Yang, I. A. and Bell, S. C. (2005). Antibiotics in cystic fibrosis (CF): A systematic review. Array, Crete, Greece, 22-25 Jun, 2005. Amsterdam, Netherlands: Elsevier BV.
Kim, S. T., Passmore, L., Dent, A. G., Slaughter, R., Yang, I. A., Fong, K. M., Zimmerman, P. V. and Bell, S. C. (2005). Gender difference in prevalence of non-cystic fibrosis bronchiectasis (NCFB) does not influence clinical phenotype. 2005 Annual Scientific Meeting The Thoracic Society of Australia and New Zealand, Perth, Australia, 18-23 March, 2005. Carlton South, Victoria: Blackwell Publishing Asia. doi: 10.1111/j.1440-1843.2005.00663.x-i1
Molenaar, P., Russell, F. D., Rabnott, G., Yang, I., Fong, K. M., Savarimuthu, S. M., Li, L. and West, M. J. (2002). The positive inotropic effects of norepinephrine are potentiated by chronic beta1-blocker administration but are conserved across Ser49Gly- and Gly389Arg-beta1-adrenergic receptor polymorphisms in human right atrium. American Heart Association Scientific Sessions 2002, Chicago, 17-20 Nov, 2002. Hagerstown, U.S.A.: Lippincott Williams & Wilkins.
Wolter, J. M., Seeney, S. L., Yang, I. A., Bowler, S. D., Bell, S. and Mccormack, J. G. (2000). Azithromycin (AZM) reduced TNF- release from lipopolysachharide (LPS)-stimulated mononuclear cells (PBMC) in cystic fibrosis (CF). ASID Annual Scientific Meeting, Laura, NSW, 15-19 April, 2001. Balgowlah NSW: ADIS Press Australia.
Bell, S., Wolter, J. M., Seeney, S. L., Gan, R., Yang, I., Bowler, S. D. and Mccormack, J. G. (2000). Azithromycin (AZM) reduces TNF- release from lipopolysachcharide (LPS) - stimulated mononuclear cells (PBMC) in cystic fibrosis. Fourteenth Annual North American Cystic Fibrosis Conference, Baltimore Maryland, USA, 9-12 Novembe, 2000. New York, USA: Wiley Liss, Div John Wiley & Sons.
Gan, R., Bowler, S. D., Seeney, S. L., Wolter, J.M., Masel, P. J., Bunting, J., Tunnicliffe, A. M., Rabnott, G. C., Yang, I. A. and Bell, S. (2000). Tumour necrosis factor (TNF ), myeloperoxides (MPO) and interleukin-1 receptor antagonist polymorphisms in cystic fibrosis.. Fourteenth Annual North American Cystic Fibrosis Conference, Baltimore Maryland, USA, 9-12 Novewmber, 2000. New York USA: Wiley-Liss.
GSTM1 and GSTP1 polymorphisms in chronic obstructive pulmonary disease (COPD)
Yang, I. A., Gan, R., Tunnicliffe, A. M., Rabnott, G. C., Slaughter, R., Zimmerman, P.V. and Fong, K. M. (1999). GSTM1 and GSTP1 polymorphisms in chronic obstructive pulmonary disease (COPD). Pulmonary-Renal Interface, Hyatt Regency Sanctuary Cove, 26 - 28 Nov, 1999. Qld.: Thoracic Society of Qld..
GSTM1 and GSTT1 genotypes in Australians with NSCLC
Gan, R., Yang, I. A., Tunnicliffe, A. M., Rabnott, G. C. and Fong, K. M. (1999). GSTM1 and GSTT1 genotypes in Australians with NSCLC. Pulmonary-Renal Interface, Hyatt Regency Sanctuary Cove, 26 - 28 Nov, 1999. Qld.: Thoracic Society.
GSTM1 genotypes in Australian patients with NSCLC
Gan, R., Yang, I., Tunnicliffe, A. M., Rabnott, G. C., Bowman, R., Zimmerman, P.V. and Fong, K. M. (1999). GSTM1 genotypes in Australian patients with NSCLC. Heart and Lungs, Canberra, 26 Feb - 3 March 1999. Carlton, Vic.: Blackwell Science.
GSTT1 and GSTM1 polymorphisms in Australian chronic obstructive pulmonary disease (COPD) patients
Yang, I. A., Gan, R., Tunniclife, A. M., Rabnott, G. C., Zimmerman, P.V. and Fong, K. M. (1999). GSTT1 and GSTM1 polymorphisms in Australian chronic obstructive pulmonary disease (COPD) patients. European Society Annual Congress, Madrid, Spain, 9 - 13 Oct, 1999. Copenhagen, Denmark: European Respiratory Society & Munksgaard Int. Publishers.
Health informatics in nursing education, research and quality assurance for asthma
Moloney, C., Fong, K. M., Yang, I., Reilly, R. and Zimmerman, P. V. (1999). Health informatics in nursing education, research and quality assurance for asthma. Heart and Lungs, Canberra, 26 Feb - 3 March 1999. Carlton, Vic.: Blackwell Science.
Quantification of pulmonary emphysema using high-resolution computed tomography
Yang, I., Slaughter, R., Roszkowski, A., Fong, K. M. and Zimmerman, P. V. (1999). Quantification of pulmonary emphysema using high-resolution computed tomography. Heart and Lungs., Canberra, 26 Feb - 3 March 1999. Carlton, Vic.: Blackwell Science.
b2 adrenergic receptor genotypes in severe asthma
Douglas, J. A., Yang, I., Rabnott, G. C., Tunnicliffe, A. M., McCarthy, J. B., Zimmerman, P. V. and Fong, K. M. (1999). b2 adrenergic receptor genotypes in severe asthma. Heart and Lungs, Canberra, 26 Feb - 3 March 1999. Carlton, Vic.: Blackwell Science.
b2 adrenoceptor genotypes and life-threatening asthma
Rabnott, G. C., Tunnicliffe, A. M., Yang, I. A., Douglas, J. A., Shaw, J., McCarthy, J. B., Zimmerman, P. V. and Fong, K. M. (1999). b2 adrenoceptor genotypes and life-threatening asthma. Pulmonary-Renal Interface, Hyatt Regency Sanctuary Cove, 26 - 28 Nov, 1999. Qld.: Thoracic Society of Qld..
Genetic variation in COPD pathogenesis
Ian Anthony,Yang, (2002). Genetic variation in COPD pathogenesis. PhD Thesis, School of Medicine, The University of Queensland.
'Max Up' Trial - Maximising uptake of lung cancer screening and smoking cessation outcomes
(2023–2026) NHMRC MRFF EMCR - Early to Mid-Career Researchers
(2023–2024) Prince Charles Hospital Foundation
(2022–2026) University of Technology Sydney
ACRF Lung Cancer Screening CENTRE OF EXCELLENCE (LUSCE)
(2021–2025) Australian Cancer Research Foundation
(2021–2025) Bond University
Lung Cancer Screening in Queensland
(2021–2025) Cancer Council Queensland
Lung cancer screening for early detection
(2021–2025) NHMRC MRFF EPCDR - Improving Diagnosis in Cancers with Low Survival Rates
Inflammatory changes in 'onion skin' tissue layers surrounding the tumour site in lung cancer
(2021–2023) Prince Charles Hospital Foundation
(2020–2021) Prince Charles Hospital Foundation
(2019–2020) Prince Charles Hospital Foundation
Dietary fibre and short chain fatty acids as immune regulators in COPD: a potential novel therapy
(2018–2020) Prince Charles Hospital Foundation
Extracellular vesicles as a novel biomarker for chronic obstructive pulmonary disease (COPD)
(2018–2020) Prince Charles Hospital Foundation
(2018–2019) Queensland University of Technology
Testing the lung microbiome to predict risk of frequent exacerbations in COPD
(2017–2021) NHMRC Project Grant
Clinical trial validation of a blood exosome-prognosticator in lung cancer
(2017–2019) Prince Charles Hospital Foundation
(2017–2019) Prince Charles Hospital Foundation
ACRF Centre for Lung Cancer Early Detection
(2016–2023) Australian Cancer Research Foundation
(2016–2019) Prince Charles Hospital Foundation
Using the lung microbiome to predict response to continuous antibiotics in COPD
(2016) Australian Respiratory Council
SoM Leaders Research Support for Head Northside Clinical School
(2015–2017) Mayne Bequest Fund
The lung microbiome in coexisting COPD and bronchiectasis
(2014–2017) Prince Charles Hospital Foundation
Electronic Snapshot for Outpatient Management of COPD (ESO-COPD)
(2014–2015) Australian Centre for Health Services Innovation
(2013–2017) PhD Scholarship in Lung Cancer funded by the Lung Foundation Australia/Neville Bantoft Bequest
Improving outcomes for patients with lung cancer and malignant mesothelioma
(2013–2014) Cancer Bequest Fund
Clinical Academic Fellowship - Thoracic Physician
(2012–2017) Clinical Academic Fellowships
(2012–2017) NHMRC Career Development Award
(2012–2014) Queensland University of Technology
Cigarette smoke and age-related epigenetic changes in the lung
(2012–2013) Prince Charles Hospital Foundation
(2011–2012) Pfizer Australia Pty Limited
Tissue Culture Facility for the UQ Thoracic Research Centre
(2011) NHMRC Equipment Grant
Novel microRNAs in pulmonary neoplasia
(2010–2011) Queensland Health
Low dose CT screening for lung cancer
(2009–2017) Queensland Health Smart Health Research Grant
(2009–2015) University of Newcastle
(2009–2012) Cancer Council Queensland
Mayne Bequest Fund Research Support Award: Thoracic Research
(2009–2012) Mayne Bequest Fund
Genomics of environmental stress and lung damage
(2008–2012) Queensland Health Smart Health Research Grant
Aberrant promoter methylation in lung cancer and smokers (TPCH)
(2007–2013) Queensland Health Smart Health Research Grant
(2007–2012) Medical Benefits Fund of Australia Limited
Preventing progression of COPD
(2007–2011) NHMRC Career Development Award
The role of innate immunity genes in COPD
(2006–2009) NHMRC Project Grant
(2006) Prince Charles Hospital Foundation
Molecular pathways associated with the severity of COPD
(2006) Prince Charles Hospital Foundation
Slowing the Progression of Chronic Lung Disease
(2006) Viertel Foundation (Sylvia and Charles Viertel)
Innate immunity genes in asthma and allergy
(2005–2006) Asthma Foundation of Queensland
Biomarkers of lung cancer
Doctor Philosophy — Principal Advisor
Other advisors:
Elastin turnover in the lung microenvironment and its significance in Lung Repair and Non-Small Cell Lung Carcinoma (NSCLC)
Master Philosophy — Principal Advisor
Other advisors:
Biomarkers for chronic obstructive pulmonary disease (COPD)
Doctor Philosophy — Principal Advisor
Randomised pragmatic trial of comprehensive tissue sampling enabled by ultrathin bronchoscopic Radial probe EndoBronchial Ultrasound versus CT-guided TransThoracic needle aspiration/biopsy (REBUTT) for evaluation of peripheral pulmonary lesions.
Doctor Philosophy — Associate Advisor
Other advisors:
Screening For Biomarkers in Non-Small Cell Lung Cancer
Doctor Philosophy — Associate Advisor
Other advisors:
Population-wide outcomes of catheter ablation of atrial fibrillation
Doctor Philosophy — Associate Advisor
Other advisors:
Blood biomarkers for lung cancer screening
Doctor Philosophy — Associate Advisor
Other advisors:
A multivariable prediction model for osteoporotic fracture and low bone density in a lung cancer screening cohort
Master Philosophy — Associate Advisor
Other advisors:
(2021) Doctor Philosophy — Principal Advisor
Other advisors:
(2021) Master Philosophy — Principal Advisor
Other advisors:
(2019) Master Philosophy — Principal Advisor
Other advisors:
(2018) Doctor Philosophy — Principal Advisor
Other advisors:
(2012) Master Philosophy — Principal Advisor
MOLECULAR MECHANISMS UNDERLYING PROGRESSION OF CHRONIC OBSTRUCTIVE PULMONARY DISEASE (COPD)
(2014) Doctor Philosophy — Joint Principal Advisor
Other advisors:
Air pollution and child health in low- and middle-income countries
(2023) Doctor Philosophy — Associate Advisor
Using proteomics to understand and prevent asthma exacerbations with macrolide antibiotics
(2023) Doctor Philosophy — Associate Advisor
Other advisors:
(2022) Doctor Philosophy — Associate Advisor
Other advisors:
(2022) Doctor Philosophy — Associate Advisor
Other advisors:
Evaluating NanoString Technology to Enhance the Molecular Characterisation of Lung Cancer
(2021) Doctor Philosophy — Associate Advisor
Other advisors:
(2021) Doctor Philosophy — Associate Advisor
Other advisors:
The Role of Exhaled Breath Analysis in the Diagnosis and Monitoring of Lung Diseases
(2017) Doctor Philosophy — Associate Advisor
(2015) Master Philosophy — Associate Advisor
Other advisors:
The Queensland Lung Cancer Screening Study
(2015) Doctor Philosophy — Associate Advisor
Genomic characterisation of asbestos-related lung cancer
(2014) Doctor Philosophy — Associate Advisor
Other advisors:
Aberrant microRNA Expression in Lung Cancer
(2013) Doctor Philosophy — Associate Advisor
Other advisors:
MOLECULAR BIOMARKERS IN THORACIC ONCOLOGY
(2013) Doctor Philosophy — Associate Advisor
Other advisors:
The Genetic Basis of Carvedilol Responsiveness in Human Heart Failure
(2008) Master Philosophy — Associate Advisor
Other advisors:
Note for students: The possible research projects listed on this page may not be comprehensive or up to date. Always feel free to contact the staff for more information, and also with your own research ideas.
Diagnosis and treatment of chronic obstructive pulmonary disease
Improving approaches to the early diagnosis, monitoring and management of patients with COPD
Lung ageing
Genetics and epigenetics of ageing in the lung
The lung's response to air pollution
Gene-environment interaction in the lung's response to exposure to air pollutants