Journal Article: AICAR transformylase/IMP cyclohydrolase (ATIC) is essential for de novo purine biosynthesis and infection by Cryptococcus neoformans
Wizrah, Maha S. I., Chua, Sheena M. H., Luo, Zhenyao, Manik, Mohammad K., Pan, Mengqi, Whyte, Jessica M. L., Robertson, Avril A. B., Kappler, Ulrike, Kobe, Bostjan and Fraser, James A. (2022). AICAR transformylase/IMP cyclohydrolase (ATIC) is essential for de novo purine biosynthesis and infection by Cryptococcus neoformans. Journal of Biological Chemistry, 298 (10) 102453, 102453. doi: 10.1016/j.jbc.2022.102453
Journal Article: Lineages derived from Cryptococcus neoformans type strain H99 support a link between the capacity to be pleomorphic and virulence
Fernandes, Kenya E., Fraser, James A. and Carter, Dee A. (2022). Lineages derived from Cryptococcus neoformans type strain H99 support a link between the capacity to be pleomorphic and virulence. mBio, 13 (2). doi: 10.1128/mbio.00283-22
Journal Article: Identification and characterisation of sPEPs in Cryptococcus neoformans
Erpf, Paige E., Chua, Sheena M.H., Phung, Toan K., Kerr, Edward D., Rothnagel, Joseph A., Schulz, Benjamin L. and Fraser, James A. (2022). Identification and characterisation of sPEPs in Cryptococcus neoformans. Fungal Genetics and Biology, 160 103688, 103688. doi: 10.1016/j.fgb.2022.103688
Novel Broad Spectrum Antifungals Active Against Drug Resistant Candida Auris
(2020–2023) NHMRC IDEAS Grants
(2019) UQ Major Equipment and Infrastructure
(2018) UQ Major Equipment and Infrastructure
The Cryptococcus neoformans SAGA: Investigating the SAGA associated Histone acetyltransferase and Deubiquitinase modules opposing influence on virulence
Doctor Philosophy
Antifungal agents to target disseminated mycoses
Doctor Philosophy
The role of the cotranscriptional activator complex SAGA in virulence of Cryptococcus neoformans
Doctor Philosophy
Evolution of the Mating-Type Locus: The Basidiomycetes
Fraser, J., Hsueh, Y., Findley, K. and Heitman, J. (2007). Evolution of the Mating-Type Locus: The Basidiomycetes. Sex in Fungi: Molecular Determination and Evolutionary Implications. (pp. 19-34) edited by Heitman, J., Kronstad, J., Taylor, J. and Casselton, L.. Washington, DC: ASM Press. doi: 10.1037/11499-002
Sex, MAT, and the Evolution of Fungal Virulence
Fraser, James A. and Heitman, Joseph (2006). Sex, MAT, and the Evolution of Fungal Virulence. Sex, MAT, and the Evolution of Fungal Virulence. (pp. 13-33) edited by Heitman, J, Filler, SG, Edwards, JE and Mitchell, AP. WASHINGTON: AMER SOC MICROBIOLOGY.
Wizrah, Maha S. I., Chua, Sheena M. H., Luo, Zhenyao, Manik, Mohammad K., Pan, Mengqi, Whyte, Jessica M. L., Robertson, Avril A. B., Kappler, Ulrike, Kobe, Bostjan and Fraser, James A. (2022). AICAR transformylase/IMP cyclohydrolase (ATIC) is essential for de novo purine biosynthesis and infection by Cryptococcus neoformans. Journal of Biological Chemistry, 298 (10) 102453, 102453. doi: 10.1016/j.jbc.2022.102453
Fernandes, Kenya E., Fraser, James A. and Carter, Dee A. (2022). Lineages derived from Cryptococcus neoformans type strain H99 support a link between the capacity to be pleomorphic and virulence. mBio, 13 (2). doi: 10.1128/mbio.00283-22
Identification and characterisation of sPEPs in Cryptococcus neoformans
Erpf, Paige E., Chua, Sheena M.H., Phung, Toan K., Kerr, Edward D., Rothnagel, Joseph A., Schulz, Benjamin L. and Fraser, James A. (2022). Identification and characterisation of sPEPs in Cryptococcus neoformans. Fungal Genetics and Biology, 160 103688, 103688. doi: 10.1016/j.fgb.2022.103688
Low, Y. S., Garcia, M. D., Lonhienne, T., Fraser, J. A., Schenk, G. and Guddat, L. W. (2021). Triazolopyrimidine herbicides are potent inhibitors of Aspergillus fumigatus acetohydroxyacid synthase and potential antifungal drug leads. Scientific Reports, 11 (1) 21055. doi: 10.1038/s41598-021-00349-9
Chua, Sheena M. H., Wizrah, Maha S. I., Luo, Zhenyao, Lim, Bryan Y. J., Kappler, Ulrike, Kobe, Bostjan and Fraser, James A. (2021). Structural features of Cryptococcus neoformans bifunctional GAR/AIR synthetase may present novel antifungal drug targets. Journal of Biological Chemistry, 297 (4) 101091. doi: 10.1016/j.jbc.2021.101091
Surveying purine biosynthesis across the domains of life unveils promising drug targets in pathogens
Chua, Sheena M. H. and Fraser, James A. (2020). Surveying purine biosynthesis across the domains of life unveils promising drug targets in pathogens. Immunology and Cell Biology, 98 (10), 819-831. doi: 10.1111/imcb.12389
Agnew-Francis, Kylie A., Tang, Yu Cheng, Lin, Xin, Low, Yu Shang, Wun, Shun Jie, Kuo, Andy, Elias, S. M. A. Sayeed Ibn, Lonhienne, Thierry G., Condon, Nicholas, Pimentel, Bruna Natalia Alves da Silva, Vergani, Carlos, Smith, Maree T., Fraser, James A., Williams, Craig M. and Guddat, Luke W (2020). Herbicides that target acetohydroxyacid synthase are potent inhibitors of the growth of drug resistant Candida auris. ACS infectious diseases, 6 (11) acsinfecdis.0c00229, 2901-2912. doi: 10.1021/acsinfecdis.0c00229
Structures of fungal and plant acetohydroxyacid synthases
Lonhienne, Thierry, Low, Yu Shang, Garcia, Mario D., Croll, Tristan, Gao, Yan, Wang, Quan, Brillault, Lou, Williams, Craig M., Fraser, James A., McGeary, Ross P., West, Nicholas P., Landsberg, Michael J., Rao, Zihe, Schenk, Gerhard and Guddat, Luke W. (2020). Structures of fungal and plant acetohydroxyacid synthases. Nature, 586 (7828), 317-321+. doi: 10.1038/s41586-020-2514-3
Spencer, Garrick W.K., Chua, Sheena M.H., Erpf, Paige E., Wizrah, Maha S.I., Dyba, Taylor G., Condon, Nicholas D. and Fraser, James A. (2020). Broadening the spectrum of fluorescent protein tools for use in the encapsulated human fungal pathogen Cryptococcus neoformans. Fungal Genetics and Biology, 138 103365, 103365. doi: 10.1016/j.fgb.2020.103365
Tan, Yuen Ping, Savchenko, Andrei I., Agnew-Francis, Kylie A., Boyle, Glen M., Bernhardt, Paul V., Fraser, James A. and Williams, Craig M. (2020). Kalparinol, a Salvialane (Isodaucane) sesquiterpenoid derived from native Australian dysphania species that suggests a putative biogenetic link to zerumbone. Journal of Natural Products, 83 (5) acs.jnatprod.9b01039, 1473-1479. doi: 10.1021/acs.jnatprod.9b01039
Tan, Yuen Ping, Agnew‐Francis, Kylie A., Hofmann, Julian, Savchenko, Andrei I., Lafontaine, Scott R., Boyle, Glen M., Bernhardt, Paul V., Fraser, James A., Shellhammer, Thomas H. and Williams, Craig M. (2020). Humulene diepoxides from the Australian arid zone herb Dysphania: assignment of aged hops constituents. Chemistry: A European Journal, 26 (7) chem.201904420, 1653-1660. doi: 10.1002/chem.201904420
Regulatory mechanism of the atypical AP-1-like transcription factor Yap1 in Cryptococcus neoformans
So, Yee-Seul, Maeng, Shinae, Yang, Dong-Hoon, Kim, Hyelim, Lee, Kyung-Tae, Yu, Seong-Ryong, Tenor, Jennifer L., Giri, Vinay K., Toffaletti, Dena L., Arras, Samantha, Fraser, James A., Perfect, John R. and Bahn, Yong-Sun (2019). Regulatory mechanism of the atypical AP-1-like transcription factor Yap1 in Cryptococcus neoformans. mSphere, 4 (6) e00785, e00785-19. doi: 10.1128/mSphere.00785-19
amdS as a dominant recyclable marker in Cryptococcus neoformans
Erpf, Paige E., Stephenson, Christina J. and Fraser, James A. (2019). amdS as a dominant recyclable marker in Cryptococcus neoformans. Fungal Genetics and Biology, 131 103241, 103241. doi: 10.1016/j.fgb.2019.103241
MCC950 directly targets the NLRP3 ATP-hydrolysis motif for inflammasome inhibition
Coll, Rebecca C., Hill, James R., Day, Christopher J., Zamoshnikova, Alina, Boucher, Dave, Massey, Nicholas L., Chitty, Jessica L., Fraser, James A., Jennings, Michael P., Robertson, Avril A. B. and Schroder, Kate (2019). MCC950 directly targets the NLRP3 ATP-hydrolysis motif for inflammasome inhibition. Nature Chemical Biology, 15 (6), 556-559. doi: 10.1038/s41589-019-0277-7
Chitty, Jessica L., Edwards, David J., Robertson, Avril A. B., Butler, Mark S., Duley, John A., Cooper, Matthew A. and Fraser, James A. (2019). Quantitation of Purines from Pigeon Guano and Implications for Cryptococcus neoformans Survival During Infection. Mycopathologia, 184 (2), 273-281. doi: 10.1007/s11046-018-0315-0
Garcia, Mario D., Chua, Sheena M. H., Low, Yu-Shang, Lee, Yu-Ting, Agnew-Francis, Kylie, Wang, Jian-Guo, Nouwens, Amanda, Lonhienne, Thierry, Williams, Craig M., Fraser, James A. and Guddat, Luke W. (2018). Commercial AHAS-inhibiting herbicides are promising drug leads for the treatment of human fungal pathogenic infections. Proceedings of the National Academy of Sciences of the United States of America, 115 (41), E9649-E9658. doi: 10.1073/pnas.1809422115
Cell Wall and Whole Cell Proteomes Define Flocculation and Fermentation Behavior of Yeast
Kerr, Edward, McDiarmid, Duin, Fraser, James and Schulz, Benjamin (2018). Cell Wall and Whole Cell Proteomes Define Flocculation and Fermentation Behavior of Yeast. Fermentation, 4 (3) 80, 80. doi: 10.3390/fermentation4030080
Kummari, Lalith K., Butler, Mark S., Furlong, Emily, Blundell, Ross, Nouwens, Amanda, Silva, Alberto B., Kappler, Ulrike, Fraser, James A., Kobe, Bostjan, Cooper, Matthew A. and Robertson, Avril A.B. (2018). Antifungal benzo[b]thiophene 1,1-dioxide IMPDH inhibitors exhibit pan-assay interference (PAINS) profiles. Bioorganic and Medicinal Chemistry, 26 (20), 5408-5419. doi: 10.1016/j.bmc.2018.09.004
Hommel, Benjamin, Mukaremera, Liliane, Cordero, Radames J. B., Coelho, Carolina, Desjardins, Christopher A., Sturny-Leclère, Aude, Janbon, Guilhem, Perfect, John R., Fraser, James A., Casadevall, Arturo, Cuomo, Christina A., Dromer, Françoise, Nielsen, Kirsten and Alanio, Alexandre (2018). Titan cells formation in Cryptococcus neoformans is finely tuned by environmental conditions and modulated by positive and negative genetic regulators. PLoS Pathogens, 14 (5) e1006982, e1006982. doi: 10.1371/journal.ppat.1006982
Pedwell, Rhianna K., Fraser, James A., Wang, Jack T. H., Clegg, Jack K., Chartres, Jy D. and Rowland, Susan L. (2018). The beer and biofuels laboratory: a report on implementing and supporting a large, interdisciplinary, yeast-focused course-based undergraduate research experience. Biochemistry and Molecular Biology Education , 46 (3), 213-222. doi: 10.1002/bmb.21111
The long history of the diverse roles of short ORFs: sPEPs in fungi
Erpf, Paige E. and Fraser, James A. (2018). The long history of the diverse roles of short ORFs: sPEPs in fungi. Proteomics, 18 (10) 1700219, e1700219. doi: 10.1002/pmic.201700219
Lonhienne, Thierry, Garcia, Mario D., Noble, Chris, Harmer, Jeffrey, Fraser, James A., Williams, Craig M. and Guddat, Luke W. (2017). High resolution crystal structures of the acetohydroxyacid synthase-pyruvate complex provide new insights into its catalytic mechanism. Chemistryselect, 2 (36), 11981-11988. doi: 10.1002/slct.201702128
Convergent microevolution of Cryptococcus neoformans hypervirulence in the laboratory and the clinic
Arras, Samantha D. M., Ormerod, Kate L., Erpf, Paige E., Espinosa, Monica I., Carpenter, Alex C., Blundell, Ross D., Stowasser, Samantha R., Schulz, Benjamin L., Tanurdzic, Milos and Fraser, James A. (2017). Convergent microevolution of Cryptococcus neoformans hypervirulence in the laboratory and the clinic. Scientific Reports, 7 (1) 17918, 1-14. doi: 10.1038/s41598-017-18106-2
Antimicrobial octapeptin C4 analogues active against Cryptococcus species
Chitty, Jessica L., Butler, Mark S., Suboh, Azzah, Edwards, David J., Cooper, Matthew A., Fraser, James A. and Robertson, Avril A. B. (2017). Antimicrobial octapeptin C4 analogues active against Cryptococcus species. Antimicrobial agents and chemotherapy, 62 (2) e00986-17, 1-10. doi: 10.1128/AAC.00986-17
Upadhya, Rajendra, Lam, Woei C., Maybruck, Brian T., Donlin, Maureen J., Chang, Andrew L., Kayode, Sarah, Ormerod, Kate L., Fraser, James A., Doering, Tamara L. and Lodge, Jennifer K. (2017). A fluorogenic C. neoformans reporter strain with a robust expression of m-cherry expressed from a safe haven site in the genome. Fungal Genetics and Biology : FG & B, 108, 13-25. doi: 10.1016/j.fgb.2017.08.008
Chitty, Jessica L., Blake, Kirsten L., Blundell, Ross D., Koh, Y. Q. Andre E., Thompson, Merinda, Robertson, Avril A. B., Butler, Mark S., Cooper, Matthew A., Kappler, Ulrike, Williams, Simon J., Kobe, Bostjan and Fraser, James A. (2017). Cryptococcus neoformans ADS lyase is an enzyme essential for virulence whose crystal structure reveals features exploitable in antifungal drug design. Journal of Biological Chemistry, 292 (28), 11829-11839. doi: 10.1074/jbc.M117.787994
Hagen, Ferry, Lumbsch, H. Thorsten, Arsenijevic, Valentina Arsic, Badali, Hamid, Bertout, Sebastien, Billmyre, R. Blake, Rosa Bragulat, M., Javier Cabanes, F., Carbia, Mauricio, Chakrabarti, Arunaloke, Chaturvedi, Sudha, Chaturvedi, Vishnu, Chen, Min, Chowdhary, Anuradha, Colom, Maria-Francisca, Cornely, Oliver A., Crous, Pedro W., Cuetara, Maria S., Diaz, Mara R., Espinel-Ingroff, Ana, Fakhim, Hamed, Falk, Rama, Fang, Wenjie, Herkert, Patricia F., Ferrer Rodriguez, Consuelo, Fraser, James A., Gene, Josepa, Guarro, Josep, Idnurm, Alexander ... Boekhoutiii, Teun (2017). Importance of resolving fungal nomenclature: the case of multiple pathogenic species in the Cryptococcus genus. Msphere, 2 (4) e00238-17. doi: 10.1128/mSphere.00238-17
Purine acquisition and synthesis by human fungal pathogens
Chitty, Jessica L. and Fraser, James A. (2017). Purine acquisition and synthesis by human fungal pathogens. Microorganisms, 5 (2) 33, 33.1-33.16. doi: 10.3390/microorganisms5020033
Sirtuins in the phylum Basidiomycota: A role in virulence in Cryptococcus neoformans
Arras, Samantha D. M., Chitty, Jessica L., Wizrah, Maha S. I., Erpf, Paige E., Schulz, Benjamin L., Tanurdzic, Milos and Fraser, James A. (2017). Sirtuins in the phylum Basidiomycota: A role in virulence in Cryptococcus neoformans. Scientific Reports, 7 (1) 46567, 46567.1-46567.14. doi: 10.1038/srep46567
GMP synthase is required for virulence factor production and infection by cryptococcus neoformans
Chitty, Jessica L., Tatzenko, Tayla L. , Williams, Simon J., Koh, Y. Q. Andre E., Corfield, Elizabeth C., Butler, Mark S., Robertson, Avril A. B., Cooper, Matthew A., Kappler, Ulrike, Kobe, Bostjan and Fraser, James A. (2017). GMP synthase is required for virulence factor production and infection by cryptococcus neoformans. Journal of Biological Chemistry, 292 (7), 3049-3059. doi: 10.1074/jbc.M116.767533
Lonhienne, Thierry, Garcia, Mario D., Fraser, James A., Williams, Craig M. and Guddat, Luke W. (2017). The 2.0 Å X-ray structure for yeast acetohydroxyacid synthase provides new insights into its cofactor and quaternary structure requirements. PLoS One, 12 (2) e0171443, e0171443.1-e0171443.13. doi: 10.1371/journal.pone.0171443
Borneman, A. R., Forgan, A.H., Kolouchova, R., Fraser, J. A. and Schmidt, S.A. (2017). Corrigendum: Whole Genome Comparison Reveals High Levels of Inbreeding and Strain Redundancy Across the Spectrum of CommercialWine Strains of Saccharomyces cerevisiae [G3 Genes|Genomes|Genetics, 6 (957-971)]. G3: Genes, Genomes, Genetics, 7 (1), 319-319. doi: 10.1534/g3.116.036038
Targeted genome editing via CRISPR in the pathogen Cryptococcus neoformans
Arras, Samantha D. M., Chua, Sheena M. H., Wizrah, Maha S. I., Faint, Joshua A., Yap, Amy S. and Fraser, James A. (2016). Targeted genome editing via CRISPR in the pathogen Cryptococcus neoformans. PloS One, 11 (10) e0164322, e0164322. doi: 10.1371/journal.pone.0164322
Arras, Samantha D. M. and Fraser, James A. (2016). Chemical inhibitors of non-homologous end joining increase targeted construct integration in Cryptococcus neoformans. PLoS One, 11 (9) e0163049, e0163049. doi: 10.1371/journal.pone.0163049
Blundell, Ross D., Williams, Simon J., Arras, Samantha D. M., Chitty, Jessica L., Blake, Kirsten L., Ericsson, Daniel J., Tibrewal, Nidhi, Rohr, Jurgen, Koh, Y. Q. Andre, Kappler, Ulrike, Robertson, Avril A. B., Butler, Mark S., Cooper, Matthew A., Kobe, Bostjan and Fraser, James A. (2016). Disruption of de novo adenosine triphosphate (ATP) biosynthesis abolishes virulence in Cryptococcus neoformans. ACS Infectious Diseases, 2 (9), 651-663. doi: 10.1021/acsinfecdis.6b00121
Beattie, Karren D., Ellwood, Nicola, Kumar, Rohitesh, Yang, Xinzhou, Healy, Peter C., Choomuenwai, Vanida, Quinn, Ronald J., Elliott, Alysha G., Huang, Johnny X., Chitty, Jessica L., Fraser, James A., Cooper, Matthew A. and Davis, Rohan A. (2016). Antibacterial and antifungal screening of natural products sourced from Australian fungi and characterisation of pestalactams D-F. Phytochemistry, 124, 79-85. doi: 10.1016/j.phytochem.2015.12.014
Borneman, Anthony R., Forgan, Angus H., Kolouchova, Radka, Fraser, James A. and Schmidt, Simon A. (2016). Whole genome comparison reveals high levels of inbreeding and strain redundancy across the spectrum of commercial wine strains of Saccharomyces cerevisiae. G3: Genes, Genomes, Genetics, 6 (4), 957-971. doi: 10.1534/g3.115.025692
Commercial herbicides can trigger the oxidative inactivation of acetohydroxyacid synthase
Lonhienne, Thierry, Nouwens, Amanda, Williams, Craig M., Fraser, James A., Lee, Yu-Ting, West, Nicholas P. and Guddat, Luke W. (2016). Commercial herbicides can trigger the oxidative inactivation of acetohydroxyacid synthase. Angewandte Chemie, 128 (13), 4319-4323. doi: 10.1002/ange.201511985
Commercial Herbicides Can Trigger the Oxidative Inactivation of Acetohydroxyacid Synthase
Lonhienne, Thierry, Nouwens, Amanda, Williams, Craig M., Fraser, James A., Lee, Yu-Ting, West, Nicholas P. and Guddat, Luke W. (2016). Commercial Herbicides Can Trigger the Oxidative Inactivation of Acetohydroxyacid Synthase. Angewandte Chemie - International Edition, 55 (13), 4247-4251. doi: 10.1002/anie.201511985
Polyploid Titan Cells Produce Haploid and Aneuploid Progeny To Promote Stress Adaptation
Gerstein, Aleeza C., Fu, Man Shun, Mukaremera, Liliane, Li, Zhongming, Ormerod, Kate L., Fraser, James A, Berman, Judith and Nielsen, Kirsten (2015). Polyploid Titan Cells Produce Haploid and Aneuploid Progeny To Promote Stress Adaptation. mBio, 6 (5) e01340-15, e01340-15. doi: 10.1128/mBio.01340-15
Ormerod, Kate L., George, Narelle M., Fraser, James A., Wainwright, Claire and Hugenholtz, Philip (2015). Comparative genomics of non-pseudomonal bacterial species colonising paediatric cystic fibrosis patients. PeerJ, 3 (9) e1223, e1223.1-e1223.27. doi: 10.7717/peerj.1223
Flemingin-type prenylated chalcones from the sarawak rainforest plant desmodium congestum
Rees, Karlee A., Bermudez, Cindy, Edwards, David J., Elliott, Alysha G., Ripen, Jovita E., Seta, Cynthia, Huang, Johnny X., Cooper, Matthew A., Fraser, James A., Yeo, Tiong C. and Butler, Mark S. (2015). Flemingin-type prenylated chalcones from the sarawak rainforest plant desmodium congestum. Journal of Natural Products, 78 (8), 2141-2144. doi: 10.1021/acs.jnatprod.5b00410
Taniguti, Lucas M., Schaker, Patricia D. C., Benevenuto, Juliana, Peters, Leila P., Carvalho, Giselle, Palhares, Alessandra, Quecine, Maria C., Nunes, Filipe R. S., Kmit, Maria C. P., Wai, Alvan, Hausner, Georg, Aitken, Karen S., Berkman, Paul J., Fraser, James A., Moolhuijzen, Paula M., Coutinho, Luiz L., Creste, Silvana, Vieira, Maria L. C., Kitajima, João P. and Monteiro-Vitorello, Claudia B. (2015). Complete genome sequence of Sporisorium scitamineum and biotrophic interaction transcriptome with sugarcane. PLoS One, 10 (6) e0129318, e0129318. doi: 10.1371/journal.pone.0129318
Rethinking the targets for antifungal development
Chitty, Jessica L. and Fraser, James A. (2015). Rethinking the targets for antifungal development. Microbiology Australia, 36 (2), 88-89. doi: 10.1071/MA15028
A Genomic Safe Haven for Mutant Complementation in Cryptococcus neoformans.
Arras, Samantha D. M., Chitty, Jessica L., Blake, Kirsten L., Schulz, Benjamin L. and Fraser, James A. (2015). A Genomic Safe Haven for Mutant Complementation in Cryptococcus neoformans.. PLoS One, 10 (4) e0122916, e0122916-e0122916. doi: 10.1371/journal.pone.0122916
Cryptococcus neoformans and Cryptococcus gattii, the Etiologic Agents of Cryptococcosis
Kwon-Chung, Kyung J., Fraser, James A., Doering, Tamara L., Wang, Zhuo A., Janbon, Guilhem, Idnurm, Alexander and Bahn, Yong-Sun (2014). Cryptococcus neoformans and Cryptococcus gattii, the Etiologic Agents of Cryptococcosis. Cold Spring Harbor Perspectives in Medicine, 4 (7), a019760.1-a019760.27. doi: 10.1101/cshperspect.a019760
Janbon, Guilhem, Ormerod, Kate L., Paulet, Damien, Byrnes III, Edmond J., Yadav, Vikas, Chatterjee, Gautam, Mullapudi, Nandita, Hon, Chung-Chau, Billmyre, R. Blake, Brunel, François, Bahn, Yong-Sun, Chen, Weidong, Chen, Yuan, Chow, Eve W. L., Coppée, Jean-Yves, Floyd-Averette, Anna, Gaillardin, Claude, Gerik, Kimberly J., Goldberg, Jonathan, Gonzalez-Hilarion, Sara, Gujja, Sharvari, Hamlin, Joyce L., Hsueh, Yen-Ping, Ianiri, Giuseppe, Jones, Steven, Kodira, Chinnappa D., Kozubowski, Lukasz, Lam, Woei, Marra, Marco ... Dietrich, Fred S. (2014). Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation. PLoS Genetics, 10 (4) e1004261, e1004261.1-e1004261.26. doi: 10.1371/journal.pgen.1004261
Hunter, Cameron C., Siebert, Kendra S., Downes, Damien J., Wong, Koon Ho, Kreutzberger, Sara D., Fraser, James A., Clarke, David F., Hynes, Michael J., Davis, Meryl A. and Todd, Richard B. (2014). Multiple nuclear localization signals mediate nuclear localization of the GATA transcription factor AreA. Eukaryotic Cell, 13 (4), 527-538. doi: 10.1128/EC.00040-14
Balancing stability and flexibility within the genome of the pathogen Cryptococcus neoformans
Ormerod, Kate L. and Fraser, James A. (2013). Balancing stability and flexibility within the genome of the pathogen Cryptococcus neoformans. PLoS Pathogens, 9 (12) e1003764, 1-4. doi: 10.1371/journal.ppat.1003764
Blundell, Ross D., Williams, Simon J., Morrow, Carl A., Ericsson, Daniel J., Kobe, Bostjan and Fraser, James A. (2013). Purification, crystallization and preliminary X-ray analysis of adenylosuccinate synthetase from the fungal pathogen Cryptococcus neoformans. Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 69 (Pt. 9), 1033-1036. doi: 10.1107/S1744309113021921
Secondary metabolites of the sponge-derived fungus Acremonium persicinum
Suciati, Fraser, James A., Lambert, Lynette K., Pierens, Gregory K., Bernhardt, Paul V. and Garson, Mary J. (2013). Secondary metabolites of the sponge-derived fungus Acremonium persicinum. Journal of Natural Products, 76 (8), 1432-1440. doi: 10.1021/np4002114
Nitrogen regulation of virulence in clinically prevalent fungal pathogens
Lee, I. Russel, Morrow, Carl A. and Fraser, James A. (2013). Nitrogen regulation of virulence in clinically prevalent fungal pathogens. FEMS Microbiology Letters, 345 (2), 77-84. doi: 10.1111/1574-6968.12181
Is the nickel-dependent urease complex of Cryptococcus the pathogen's Achilles' heel?
Morrow, Carl A. and Fraser, James A. (2013). Is the nickel-dependent urease complex of Cryptococcus the pathogen's Achilles' heel?. MBio, 4 (4) e00408-13, e00408-13.1-e00408-13.3. doi: 10.1128/mBio.00408-13
Lee, I. Russel, Lui, Edmund Y. L., Chow, Eve W. L., Arras, Samantha D. M., Morrow, Carl A. and Fraser, James A. (2013). Reactive oxygen species homeostasis and virulence of the fungal pathogen Cryptococcus neoformans requires an intact proline catabolism pathway. Genetics, 194 (2), 421-U199. doi: 10.1534/genetics.113.150326
Lee, I. Russel, Yang, Liting, Sebetso, Gaseene, Allen, Rebecca, Doan, Thi H. N., Blundell, Ross, Lui, Edmund Y. L., Morrow, Carl A. and Fraser, James A. (2013). Characterization of the complete uric acid degradation pathway in the fungal pathogen Cryptococcus neoformans. PLoS ONE, 8 (5) e64292, e64292.1-e64292.13. doi: 10.1371/journal.pone.0064292
Ormerod, Kate L., Morrow, Carl A., Chow, Eve W. L., Lee, I. Russel, Arras, Samantha D. M., Schirra, Horst Joachim, Cox, Gary M., Fries, Bettina C. and Fraser, James A. (2013). Comparative Genomics of Serial Isolates of Cryptococcus neoformans Reveals Gene Associated With Carbon Utilization and Virulence. G3: Genes, Genomes, Genetics, 3 (4), 675-686. doi: 10.1534/g3.113.005660
Ploidy variation as an adaptive mechanism in human pathogenic fungi
Morrow, Carl A. and Fraser, James A. (2013). Ploidy variation as an adaptive mechanism in human pathogenic fungi. Seminars in Cell and Developmental Biology, 24 (4), 339-346. doi: 10.1016/j.semcdb.2013.01.008
Lee, Yu-Ting, Cui, Chang-Jun, Chow, Eve W. L., Pue, Nason, Lonhienne, Thierry, Wang, Jian-Guo, Fraser, James A. and Guddat, Luke W. (2013). Sulfonylureas have antifungal activity and are potent inhibitors of Candida albicans acetohydroxyacid synthase. Journal of Medicinal Chemistry, 56 (1), 210-219. doi: 10.1021/jm301501k
De novo GTP biosynthesis is critical for virulence of the fungal pathogen cryptococcus neoformans
Morrow, Carl A., Valkov, Eugene, Stamp, Anna, Chow, Eve W. L., Lee, I. Russel, Wronski, Ania, Williams, Simon J., Hill, Justine M., Djordjevic, Julianne T., Kappler, Ulrke, Kobe, Bostjan and Fraser, James A. (2012). De novo GTP biosynthesis is critical for virulence of the fungal pathogen cryptococcus neoformans. PLoS Pathogens, 8 (10) e1002957, e1002957. doi: 10.1371/journal.ppat.1002957
Morrow, Carl A., Lee, I. Russell, Chow, Eve W. L., Ormerod, Kate L., Goldinger, Anita, Byrnes III, Edmond J., Nielsen, Kirsten, Heitman, Joseph, Schirra, Horst Joachim and Fraser, James A. (2012). A unique chromosomal rearrangement in the Cryptococcus neoformans var. grubii type strain enhances key phenotypes associated with virulence. mBio, 3 (2) e00310-11, e00310.1-e00310.11. doi: 10.1128/mBio.00310-11
Lee, I. Russel, Lim, Jonathan W. C., Ormerod, Kate L., Morrow, Carl A. and Fraser, James A. (2012). Characterization of an Nmr homolog that modulates gata factor-mediated nitrogen metabolite repression in Cryptococcus neoformans. PLoS One, 7 (3) e32585, e32585.1-e32585.15. doi: 10.1371/journal.pone.0032585
Findley, Keisha, Sun, Sheng, Fraser, James A., Hsueh, Yen-Ping, Averette, Anna Floyd, Li, Wenjun, Dietrich, Fred S. and Heitman, Joseph (2012). Discovery of a Modified Tetrapolar Sexual Cycle in Cryptococcus amylolentus and the Evolution of MAT in the Cryptococcus Species Complex. PLoS Genetics, 8 (2) e1002528, e1002528-1-e1002528-19. doi: 10.1371/journal.pgen.1002528
Microevolution of Cryptococcus neoformans driven by massive tandem gene amplification
Chow, Eve W. L., Morrow, Carl A., Djordjevic, Julianne T., Wood, Ian A. and Fraser, James A. (2012). Microevolution of Cryptococcus neoformans driven by massive tandem gene amplification. Molecular Biology and Evolution, 29 (8), 1987-2000. doi: 10.1093/molbev/mss066
Byrnes, Edmond J., Li, Wenjun, Ren, Ping, Lewit, Yonathan, Voelz, Kerstin, Fraser, James A., Dietrich, Fred S., May, Robin C., Chatuverdi, Sudha, Chatuverdi, Vishnu and Heitman, Joseph (2011). A diverse population of Cryptococcus gattii molecular type VGIII in Southern Californian HIV/AIDS patients. PLoS Pathogens, 7 (9) e1002205, 134-1. doi: 10.1371/journal.ppat.1002205
Lee, I. Russel, Chow, Eve W. L., Morrow, Carl A., Djordjevic, Julianne T. and Fraser, James A. (2011). Nitrogen Metabolite Repression of Metabolism and Virulence in the Human Fungal Pathogen Cryptococcus neoformans. Genetics, 188 (2), 309-323. doi: 10.1534/genetics.111.128538
Genome Variation in Cryptococcus gattii, an Emerging Pathogen of Immunocompetent Hosts
D'Souza, C.A., Kronstad, J.W., Taylor, G., Warrne, R., Yuen, M., Hu, G., Jung, W.H., Sham, A., Kidd, S.E., Tangen, K., Lee, N., Zeilmaker, T., Sawkins, J., McVicker, G., Shah, S., Gnerre, S., Griggs, A., Zeng, Q., Bartlett, K., Li, W., Wang, X., Heitman, J., Stajich, J.E., Fraser, J.A., Meyer, W., Carter, D., Schein, J., Krzywinski, M., Kwon-Chung, K.J. ... Cuomo, C.A. (2011). Genome Variation in Cryptococcus gattii, an Emerging Pathogen of Immunocompetent Hosts. mBio, 2 (1) e00342-10, e00342-1-e00342-10. doi: 10.1128/mBio.00342-10
Morrow, CA, Stamp, A, Valkov, E, Kobe, B and Fraser, JA (2010). Crystallization and preliminary X-ray analysis of mycophenolic acid-resistant and mycophenolic acid-sensitive forms of IMP dehydrogenase from the human fungal pathogen Cryptococcus. Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 66 (9), 1104-1107. doi: 10.1107/S1744309110031659
Sexual reproduction and dimorphism in the pathogenic basidiomycetes
Morrow, Carl A. and Fraser, James A. (2009). Sexual reproduction and dimorphism in the pathogenic basidiomycetes. FEMS Yeast Research, 9 (2), 161-177. doi: 10.1111/j.1567-1364.2008.00475.x
Hsueh, Yen-Ping, Fraser, James A. and Heitman, Joseph (2008). Transitions in sexuality: recapitulation of an ancestral tri- and tetrapolar mating system in Cryptococcus neoformans. Eukaryotic Cell, 7 (10), 1847-1855. doi: 10.1128/EC.00271-08
Upton, A., Fraser, J., Kidd, S., Bretz, C., Bartlett, K., Heitman, J. and Marr, K. (2007). First contemporary case of human infection with Cryptococcus gattii in Puget Sound: Evidence for spread of the Vancouver Island outbreak. Journal of Clinical Microbiology, 45 (9), 3086-3088. doi: 10.1128/JCM.00593-07
Fraser, James A., Stajich, Jason E., Tarcha, Eric J., Cole, Garry T., Inglis, Diane O., Sil, Anita and Heitman, Joseph (2007). Evolution of the mating type locus: Insights gained from the dimorphic primary fungal pathogens Histoplasma capsulatum, Coccidioides immitis, and Coccidioides posadasii. Eukaryotic Cell, 6 (4), 622-629. doi: 10.1128/EC.00018-07
Fraser, J. A., Lim, S. M. C., Diezmann, S., Wenink, E. C., Arndt, C. G., Cox, G. M., Dietrich, F. S. and Heitman, J. (2006). Yeast diversity sampling on the San Juan Islands reveals no evidence for the spread of the Vancouver Island Cryptococcus gattii outbreak to this locale. Fems Yeast Research, 6 (4), 620-624. doi: 10.1111/j.1567-1364.2006.00075.x
Kavanaugh, L. A., Fraser, J. A. and Dietrich, F. S. (2006). Recent evolution of the human pathogen Cryptococcus neoformans by intervarietal transfer of a 14-gene fragment. Molecular Biology And Evolution, 23 (10), 1879-1890. doi: 10.1093/molbev/msl070
The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans
Loftus, B. J., Fung, E., Roncaglia, P., Rowley, D., Amedeo, P., Bruno, D., Vamathevan, J., Miranda, M., Anderson, I. J., Fraser, J. A., Allen, J. E., Bosdet, I. E., Brent, M. R., Chiu, R., Doering, T. L., Dontin, M. J., D'Souza, C. A., Fox, D. S., Grinberg, V., Fu, J. M., Fukushima, M., Haas, B. J., Huang, J. C., Janbon, G., Jones, S. J. M., Koo, H. L., Krzywinski, M. I., Kwon-Chung, J. K., Lengeler, K. B. and Maiti, R. (2005). The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Science, 307 (5713), 1321-1324. doi: 10.1126/science.1103773
Chromosomal sex-determining regions in animals, plants and fungi
Fraser, J. A. and Heitman, J. (2005). Chromosomal sex-determining regions in animals, plants and fungi. Current Opinion In Genetics & Development, 15 (6), 645-651. doi: 10.1016/j.gde.2005.09.002
Chromosomal translocation and segmental duplication in Cryptococcus neoformans
Fraser, J. A., Huang, J. C., Pukkila-Worley, R., Alspaugh, J. A., Mitchell, T. G. and Heitman, J. (2005). Chromosomal translocation and segmental duplication in Cryptococcus neoformans. Eukaryotic Cell, 4 (2), 401-406. doi: 10.1128/EC.4.2.401-406.2005
Campbell, L. T., Fraser, J. A., Nichols, C. B., Dietrich, F. S., Dietrich and Heitman, J. (2005). Clinical and environmental isolates of Cryptococcus gattii from Australia that retain sexual fecundity. Eukaryotic Cell, 4 (8), 1410-1419. doi: 10.1128/EC.4.8.1410-1419.2005
Deciphering the model pathogenic fungus Cryptococcus neoformans
Idnurm, A., Bahn, Y. S., Nielsen, K., Lin, X. R., Fraser, J. A. and Heitman, J. (2005). Deciphering the model pathogenic fungus Cryptococcus neoformans. Nature Reviews Microbiology, 3 (10), 753-764. doi: 10.1038/nrmicro1245
Todd, R. B., Fraser, J. A., Wong, K. H., Davis, M. A. and Hynes, M. J. (2005). Nuclear accumulation of the GATA factor AreA in response to complete nitrogen starvation by regulation of nuclear export. Eukaryotic Cell, 4 (10), 1646-1653. doi: 10.1128/EC.4.10.1646-1653.2005
Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak
Fraser, J. A., Giles, S. S., Wenink, E. C., Geunes-Boyer, S. G., Wright, J. R., Diezmann, S., Allen, A., Stajich, J. E., Dietrich, F. S., Perfect, J. R. and Heitman, J. (2005). Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak. Nature, 437 (7063), 1360-1364. doi: 10.1038/nature04220
Convergent evolution of chromosomal sex-determining regions in the animal and fungal kingdoms
Fraser, James A., Diezmann, Stephanie, Subaran, Ryan L., Allen, Andria, Lengeler, Klaus B., Dietrich, Fred S. and Heitman, Joseph (2004). Convergent evolution of chromosomal sex-determining regions in the animal and fungal kingdoms. Plos Biology, 2 (12), 2243-2255. doi: 10.1371/journal.pbio.0020384
Evolution of fungal sex chromosomes
Fraser, J. A. and Heitman, J. (2004). Evolution of fungal sex chromosomes. Molecular Microbiology, 51 (2), 299-306. doi: 10.1046/j.1365-2958.2003.03874.x
Nichols, C. B., Fraser, J. A. and Heitman, J. (2004). PAK kinases Ste20 and Pak1 govern cell polarity at different stages of mating in Cryptococcus neoformans. Molecular Biology of The Cell, 15 (10), 4476-4489. doi: 10.1091/mbc.E04-05-0370
Fraser, J. A. and Heitman, J. (2003). Fungal mating-type loci. Current Biology, 13 (20), R792-R795. doi: 10.1016/j.cub.2003.09.046
Fraser, James A., Subaran, Ryan L., Nichols, Connie B. and Heitman, Joseph (2003). Recapitulation of the sexual cycle of the primary fungal pathogen Cryptococcus neoformans var. gattii: Implications for an outbreak on Vancouver Island, Canada. Eukaryotic Cell, 2 (5), 1036-1045. doi: 10.1128/EC.2.5.1036-1045.2003
Mating-type locus of Cryptococcus neoformans: A step in the evolution of sex chromosomes
Lengeler, Klaus B., Fox, Deborah S., Fraser, James A., Allen, Andria, Forrester, Keri, Dietrich, Fred S. and Heitman, Joseph (2002). Mating-type locus of Cryptococcus neoformans: A step in the evolution of sex chromosomes. Eukaryotic Cell, 1 (5), 704-718. doi: 10.1128/EC.1.5.704-718.2002
Fraser, J. A., Davis, M. A. and Hynes, M. J. (2002). A gene from Aspergillus nidulans with similarity to URE2 of Saccharomyces cerevisiae encodes a glutathione S-transferase which contributes to heavy metal and xenobiotic resistance. Applied And Environmental Microbiology, 68 (6), 2802-2808. doi: 10.1128/AEM.68.6.2802-2808.2002
Monahan, B. J., Fraser, J. A., Hynes, M. J. and Davis, M. A. (2002). Isolation and characterization of two ammonium permease genes, meaA and mepA, from Aspergillus nidulans. Eukaryotic Cell, 1 (1), 85-94. doi: 10.1128/EC.1.1.85-94.2002
Fraser, J. A., Davis, M. A. and Hynes, M. J. (2002). The genes gmdA, encoding an amidase, and bzuA, encoding a cytochrome P450, are required for benzamide utilization in Aspergillus nidulans. Fungal Genetics And Biology, 35 (2), 135-146. doi: 10.1006/fgbi.2001.1307
Fraser, J. A., Davis, M. A. and Hynes, M. J. (2001). The formamidase gene of Aspergillus nidulans: Regulation by nitrogen metabolite repression and transcriptional interference by an overlapping upstream gene. Genetics, 157 (1), 119-131.
Fraser, J. A., Armstrong, K. L., Morris, J. P. and Dadds, M. R. (2000). Home visiting intervention for vulnerable families with newborns: Follow-up results of a randomized controlled trial. Child Abuse and Neglect, 24 (11), 1399-1429. doi: 10.1016/S0145-2134(00)00193-9
Enhancing the complementation process in Cryptococcus neoformans
Arras, S. D. M. and Fraser, J. A. (2014). Enhancing the complementation process in Cryptococcus neoformans. 9th International Conference on Cryptococcus and Cryptococcosis, Amsterdam, The Netherlands, 15-19 May 2014. Berlin, Germany: Wiley-Blackwell Verlag GmbH. doi: 10.1111/myc.12196
Purine biosynthetic enzymes as antifungal drug targets
Blundell, R. B., Arras, S. D. M., Williams, S. J. and Fraser, J. A. (2014). Purine biosynthetic enzymes as antifungal drug targets. 9th International Conference on Cryptococcus and Cryptococcosis, Amsterdam, The Netherlands, 15-19 May 2014. Berlin, Germany: Wiley-Blackwell Verlag GmbH. doi: 10.1111/myc.12196
Ormerod, K. L., Byrnes, E. J., III, Wood, I. A., Lodge, J. K., Heitman, J. and Fraser, J. A. (2014). The H99 family tree: variation in the common laboratory reference strains of Cryptococcus neoformans var. grubii characterised through whole-genome sequencing. 9th International Conference on Cryptococcus and Cryptococcosis, Amsterdam, The Netherlands, 15-19 May 2014. Berlin, Germany: Wiley-Blackwell Verlag GmbH. doi: 10.1111/myc.12196
Secondary metabolites from saltwater culture of the sponge-derived fungus Acremonium persicinum
Suciati, Fraser, James A. and Garson, Mary J. (2011). Secondary metabolites from saltwater culture of the sponge-derived fungus Acremonium persicinum. International Symposium on the Chemistry of Natural Products (27th, ISCNP, 2011) and the 7th International Conference on Biodiversity (7th, ICOB, 2011), South Bank, QLD, Australia, 10-15 July 2011.
The Cryptococcus neoformans mating-type locus: evolutionary insights from related species
Fraser, J (2006). The Cryptococcus neoformans mating-type locus: evolutionary insights from related species. 8th International Mycological Conference, Cairns, August, 2006.
Novel Broad Spectrum Antifungals Active Against Drug Resistant Candida Auris
(2020–2023) NHMRC IDEAS Grants
(2019) UQ Major Equipment and Infrastructure
(2018) UQ Major Equipment and Infrastructure
Microevolution of Cryptococcus neoformans
(2017–2021) NHMRC Project Grant
Acetohydroxyacid synthase: A new drug target for human fungal pathogens
(2015–2018) NHMRC Project Grant
(2015) UQ Major Equipment and Infrastructure
(2014) UQ Major Equipment and Infrastructure
Purine metabolism as an antifungal drug target
(2013–2016) NHMRC Project Grant
IMPDH as an antifungal drug target
(2012–2013) Therapeutic Innovation Australia Limited
Targeting acetohydroxyacid synthase to discover new antifungal agents
(2011–2014) NHMRC Project Grant
ResTeach 2010 0.1 FTE School of Chemistry and Molecular Biosciences
(2010–2012) UQ ResTeach
(2010–2012) ARC Discovery Projects
(2007–2010) NHMRC Project Grant
The Cryptococcus neoformans SAGA: Investigating the SAGA associated Histone acetyltransferase and Deubiquitinase modules opposing influence on virulence
Doctor Philosophy — Principal Advisor
Other advisors:
Antifungal agents to target disseminated mycoses
Doctor Philosophy — Principal Advisor
Other advisors:
The role of the cotranscriptional activator complex SAGA in virulence of Cryptococcus neoformans
Doctor Philosophy — Principal Advisor
Other advisors:
Hypervirulence of Cryptococcus neoformans
Doctor Philosophy — Principal Advisor
Other advisors:
Insertional mutagenesis of Cryptococcus neoformans
Doctor Philosophy — Principal Advisor
Other advisors:
Purine biosynthesis as an anti fungal target
Doctor Philosophy — Principal Advisor
Other advisors:
Developing a cell-free, structural model of fungal cell walls
Doctor Philosophy — Associate Advisor
Other advisors:
Characterising the membrane interactions and cytotoxic activity of the anti-fungal peptide Lactofungin
Doctor Philosophy — Associate Advisor
Other advisors:
Targeting Deadly Mycotic Infection
Doctor Philosophy — Associate Advisor
Other advisors:
Targetting Candida Auris
Doctor Philosophy — Associate Advisor
Other advisors:
Purine metabolism as an antifungal target
(2022) Doctor Philosophy — Principal Advisor
Other advisors:
Targeting metabolic pathways for new antifungals: Purine biosynthesis
(2021) Doctor Philosophy — Principal Advisor
Other advisors:
The Identification and Characterisation of Short Open Reading Frame-Encoded Polypeptides in Cryptococcus neoformans
(2021) Doctor Philosophy — Principal Advisor
Other advisors:
Classical and rational approaches to antifungal drug design
(2017) Doctor Philosophy — Principal Advisor
Other advisors:
Epigenetic regulation of virulence in the fungal pathogen Cryptococcus neoformans
(2017) Doctor Philosophy — Principal Advisor
Other advisors:
Disruption of de novo ATP biosynthesis abolishes virulence in Cryptococcus neoformans
(2016) Doctor Philosophy — Principal Advisor
Other advisors:
Moving targets: Microevolution of pathogenic species within the laboratory and the human host
(2016) Doctor Philosophy — Principal Advisor
Other advisors:
(2013) Doctor Philosophy — Principal Advisor
Other advisors:
Subtelomeric Microevolution in the Human Fungal Pathogen Cryptococcus neoformans
(2013) Doctor Philosophy — Principal Advisor
Other advisors:
(2012) Doctor Philosophy — Principal Advisor
Other advisors:
Structure and function of plant and fungal acetohydroxyacid synthases
(2021) Doctor Philosophy — Associate Advisor
Other advisors:
Novel antifungals selectively targeting the purine metabolic pathway
(2019) Doctor Philosophy — Associate Advisor
Other advisors:
Characterization of Caenorhabditis elegans phosphine resistant mutant alh-6(wr3)
(2018) Doctor Philosophy — Associate Advisor
Other advisors:
Characterisation of the DEFECTIVE EMBRYO and MERISTEMS(DEM) genes of plants
(2013) Doctor Philosophy — Associate Advisor
Other advisors:
(2013) Doctor Philosophy — Associate Advisor
Other advisors: