Journal Article: Neurochemical predictors of generalised learning induced by brain stimulation and training
Ehrhardt, Shane E., Wards, Yohan, Rideaux, Reuben, Marjańska, Małgorzata, Jin, Jin, Cloos, Martijn A., Deelchand, Dinesh K., Zöllner, Helge J., Saleh, Muhammad G., Hui, Steve C. N., Ali, Tonima, Shaw, Thomas B., Barth, Markus, Mattingley, Jason B., Filmer, Hannah L. and Dux, Paul E. (2024). Neurochemical predictors of generalised learning induced by brain stimulation and training. The Journal of Neuroscience, e1676232024. doi: 10.1523/jneurosci.1676-23.2024
Journal Article: Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging
Renton, Angela I., Dao, Thuy T., Johnstone, Tom, Civier, Oren, Sullivan, Ryan P., White, David J., Lyons, Paris, Slade, Benjamin M., Abbott, David F., Amos, Toluwani J., Bollmann, Saskia, Botting, Andy, Campbell, Megan E. J., Chang, Jeryn, Close, Thomas G., Dörig, Monika, Eckstein, Korbinian, Egan, Gary F., Evas, Stefanie, Flandin, Guillaume, Garner, Kelly G., Garrido, Marta I., Ghosh, Satrajit S., Grignard, Martin, Halchenko, Yaroslav O., Hannan, Anthony J., Heinsfeld, Anibal S., Huber, Laurentius, Hughes, Matthew E. ... Bollmann, Steffen (2024). Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging. Nature Methods, 21 (2). doi: 10.1038/s41592-023-02145-x
Journal Article: Individual differences in decision strategy relate to neurochemical excitability and cortical thickness
Filmer, Hannah L., Loughnan, Kathleen, Seeto, Jennifer X., Ballard, Timothy, Ehrhardt, Shane E., Shaw, Thomas, Wards, Yohan, Rideaux, Reuben, Leow, Li-Ann, Sewell, David and Dux, Paul E. (2023). Individual differences in decision strategy relate to neurochemical excitability and cortical thickness. The Journal of Neuroscience, 43 (42), 7006-7015. doi: 10.1523/jneurosci.1086-23.2023
Non-invasive approaches for alleviating symptoms in Motor Neurone Disease
(2022–2024) Research Donation Generic
Ultra-High Field MRI of Spinal Cord Tissue in Motor Neurone Diseases
(2021–2024) Motor Neurone Disease Research Institute of Australia Inc
Use of bioinformatics to decode disease heterogeneity in motor neuron disease
Doctor Philosophy
Magnetic Resonance Spectroscopy in Patients with Motor Neuron Disease at 3T and 7T
Doctor Philosophy
Neurochemical predictors of generalised learning induced by brain stimulation and training
Ehrhardt, Shane E., Wards, Yohan, Rideaux, Reuben, Marjańska, Małgorzata, Jin, Jin, Cloos, Martijn A., Deelchand, Dinesh K., Zöllner, Helge J., Saleh, Muhammad G., Hui, Steve C. N., Ali, Tonima, Shaw, Thomas B., Barth, Markus, Mattingley, Jason B., Filmer, Hannah L. and Dux, Paul E. (2024). Neurochemical predictors of generalised learning induced by brain stimulation and training. The Journal of Neuroscience, e1676232024. doi: 10.1523/jneurosci.1676-23.2024
Renton, Angela I., Dao, Thuy T., Johnstone, Tom, Civier, Oren, Sullivan, Ryan P., White, David J., Lyons, Paris, Slade, Benjamin M., Abbott, David F., Amos, Toluwani J., Bollmann, Saskia, Botting, Andy, Campbell, Megan E. J., Chang, Jeryn, Close, Thomas G., Dörig, Monika, Eckstein, Korbinian, Egan, Gary F., Evas, Stefanie, Flandin, Guillaume, Garner, Kelly G., Garrido, Marta I., Ghosh, Satrajit S., Grignard, Martin, Halchenko, Yaroslav O., Hannan, Anthony J., Heinsfeld, Anibal S., Huber, Laurentius, Hughes, Matthew E. ... Bollmann, Steffen (2024). Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging. Nature Methods, 21 (2). doi: 10.1038/s41592-023-02145-x
Filmer, Hannah L., Loughnan, Kathleen, Seeto, Jennifer X., Ballard, Timothy, Ehrhardt, Shane E., Shaw, Thomas, Wards, Yohan, Rideaux, Reuben, Leow, Li-Ann, Sewell, David and Dux, Paul E. (2023). Individual differences in decision strategy relate to neurochemical excitability and cortical thickness. The Journal of Neuroscience, 43 (42), 7006-7015. doi: 10.1523/jneurosci.1086-23.2023
HumanBrainAtlas: an in vivo MRI dataset for detailed segmentations
Schira, Mark M., Isherwood, Zoey J., Kassem, Mustafa S., Barth, Markus, Shaw, Thomas B., Roberts, Michelle M. and Paxinos, George (2023). HumanBrainAtlas: an in vivo MRI dataset for detailed segmentations. Brain Structure and Function, 228 (8), 1-15. doi: 10.1007/s00429-023-02653-8
Lower hypothalamic volume with lower BMI is associated with shorter survival in patients with ALS
Chang, Jeryn, Shaw, Thomas B., Holdom, Cory J., McCombe, Pamela A., Henderson, Robert D., Fripp, Jurgen, Barth, Markus, Guo, Christine C., Ngo, Shyuan T. and Steyn, Frederik J. (2022). Lower hypothalamic volume with lower BMI is associated with shorter survival in patients with ALS. European Journal of Neurology, 30 (1), 57-68. doi: 10.1111/ene.15589
Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T
Chang, Jeryn, Steyn, Frederik, Ngo, Shyuan, Henderson, Robert, Guo, Christine, Bollmann, Steffen, Fripp, Jurgen, Barth, Markus and Shaw, Thomas (2022). Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. Journal of Open Source Software, 7 (76), 4368. doi: 10.21105/joss.04368
Enhanced semantic memory in a case of highly superior autobiographical memory
Ford, Lucy, Shaw, Thomas B., Mattingley, Jason B. and Robinson, Gail A. (2022). Enhanced semantic memory in a case of highly superior autobiographical memory. Cortex, 151, 1-14. doi: 10.1016/j.cortex.2022.02.007
Centering inclusivity in the design of online conferences—An OHBM–Open Science perspective
Levitis, Elizabeth, van Praag, Cassandra D Gould, Gau, Rémi, Heunis, Stephan, DuPre, Elizabeth, Kiar, Gregory, Bottenhorn, Katherine L, Glatard, Tristan, Nikolaidis, Aki, Whitaker, Kirstie Jane, Mancini, Matteo, Niso, Guiomar, Afyouni, Soroosh, Alonso-Ortiz, Eva, Appelhoff, Stefan, Arnatkeviciute, Aurina, Atay, Selim Melvin, Auer, Tibor, Baracchini, Giulia, Bayer, Johanna M M, Beauvais, Michael J S, Bijsterbosch, Janine D, Bilgin, Isil P, Bollmann, Saskia, Bollmann, Steffen, Botvinik-Nezer, Rotem, Bright, Molly G, Calhoun, Vince D, Chen, Xiao ... Maumet, Camille (2021). Centering inclusivity in the design of online conferences—An OHBM–Open Science perspective. GigaScience, 10 (8) giab051. doi: 10.1093/gigascience/giab051
Brainhack: Developing a culture of open, inclusive, community-driven neuroscience
Gau, Rémi, Noble, Stephanie, Heuer, Katja, Bottenhorn, Katherine L., Bilgin, Isil P., Yang, Yu-Fang, Huntenburg, Julia M., Bayer, Johanna M.M., Bethlehem, Richard A.I., Rhoads, Shawn A., Vogelbacher, Christoph, Borghesani, Valentina, Levitis, Elizabeth, Wang, Hao-Ting, Van Den Bossche, Sofie, Kobeleva, Xenia, Legarreta, Jon Haitz, Guay, Samuel, Atay, Selim Melvin, Varoquaux, Gael P., Huijser, Dorien C., Sandström, Malin S., Herholz, Peer, Nastase, Samuel A., Badhwar, AmanPreet, Dumas, Guillaume, Schwab, Simon, Moia, Stefano, Dayan, Michael ... Zuo, Xi-Nian (2021). Brainhack: Developing a culture of open, inclusive, community-driven neuroscience. Neuron, 109 (11), 1769-1775. doi: 10.1016/j.neuron.2021.04.001
Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI
Shaw, Thomas, York, Ashley, Ziaei, Maryam, Barth, Markus and Bollmann, Steffen (2020). Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI. NeuroImage, 218 116798, 116798. doi: 10.1016/j.neuroimage.2020.116798
Shaw, Thomas, York, Ashley, Barth, Markus and Bollmann, Steffen (2020). Towards optimising MRI characterisation of Tissue (TOMCAT) dataset including all Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) data. Data in Brief, 32 106043, 106043. doi: 10.1016/j.dib.2020.106043
Filmer, Hannah L., Ballard, Timothy, Ehrhardt, Shane E., Bollmann, Saskia, Shaw, Thomas B., Mattingley, Jason B. and Dux, Paul E. (2020). Dissociable effects of tDCS polarity on latent decision processes are associated with individual differences in neurochemical concentrations and cortical morphology. Neuropsychologia, 141 107433, 1-9. doi: 10.1016/j.neuropsychologia.2020.107433
Non-linear realignment improves hippocampus subfield segmentation reliability
Shaw, Thomas B., Bollmann, Steffen, Atcheson, Nicole T., Strike, Lachlan T., Guo, Christine, McMahon, Katie L., Fripp, Jurgen, Wright, Margaret J., Salvado, Olivier and Barth, Markus (2019). Non-linear realignment improves hippocampus subfield segmentation reliability. NeuroImage, 203 116206, 116206. doi: 10.1016/j.neuroimage.2019.116206
Filmer, Hannah L., Ehrhardt, Shane E., Shaw, Thomas B., Mattingley, Jason B. and Dux, Paul E. (2019). The efficacy of transcranial direct current stimulation to prefrontal areas is related to underlying cortical morphology. NeuroImage, 196, 41-48. doi: 10.1016/j.neuroimage.2019.04.026
Chopra, Sidhant, Shaw, Marnie, Shaw, Thomas, Sachdev, Perminder S., Anstey, Kaarin J. and Cherbuin, Nicolas (2018). More highly myelinated white matter tracts are associated with faster processing speed in healthy adults. NeuroImage, 171, 332-340. doi: 10.1016/j.neuroimage.2017.12.069
Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T
Chang, Jeryn, Steyn, Frederik, Ngo, Shyuan, Henderson, Robert, Guo, Christine, Bollmann, Steffen, Fripp, Jurgen, Barth, Markus and Shaw, Thomas (2023). Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. Concord, CA: ISMRM. doi: 10.58530/2022/3808
Shaw, Thomas (2021). Computational in vivo tissue characterisation for multi-contrast high-resolution magnetic resonance imaging data. PhD Thesis, Queensland Brain Institute, The University of Queensland. doi: 10.14264/ae6e21a
Accounting for variability in the efficacy of tDCS with cortical structure and neurochemicals
Filmer, Hannah L, Ehrhardt, Shane E, Bollmann, Saskia, Shaw, Thomas B, Mattingley, Jason B and Dux, Paul E (2019). Accounting for variability in the efficacy of tDCS with cortical structure and neurochemicals. The University of Queensland. (Dataset) doi: 10.14264/uql.2019.12
Shaw, Thomas (2014). The Effects of Attention, Appropriateness, and Familiarity on Action Understanding: A Functional MRI Study. Honours Thesis, School of Psychology, The University of Queensland.
Non-invasive approaches for alleviating symptoms in Motor Neurone Disease
(2022–2024) Research Donation Generic
Ultra-High Field MRI of Spinal Cord Tissue in Motor Neurone Diseases
(2021–2024) Motor Neurone Disease Research Institute of Australia Inc
Use of bioinformatics to decode disease heterogeneity in motor neuron disease
Doctor Philosophy — Associate Advisor
Magnetic Resonance Spectroscopy in Patients with Motor Neuron Disease at 3T and 7T
Doctor Philosophy — Associate Advisor
Other advisors: